| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036958.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-37 | 34.81 | Show/hide |
Query: LSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTA
L+S+ + R P+ S ++P ++R+ D L RE+ F+IELE T PI +A YRMA A+L+ RI+D DIPKTA
Subjt: LSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTA
Query: FRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--------------------------------------NGIR
FRSRY HYEF VM FGL AP VFMDLM VFK+FL+ FVIVFIDD +Y E G+
Subjt: FRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--------------------------------------NGIR
Query: VDSTMVEIVSEWPCLITVNEARS--------------------------------------------------------------SSVVYSDASKKSLGY
VD +E VS WP TV+E RS S V+YSDASKK LG
Subjt: VDSTMVEIVSEWPCLITVNEARS--------------------------------------------------------------SSVVYSDASKKSLGY
Query: VLTQDEKVVVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYHSNCEREDSNLTDLHQVESGQGNEFSLSLDDGLFFEG
VL Q ++ ++ H+S K F ELN+R RR L LVKDY EILYH +E+GQG +FS+S DDGL FEG
Subjt: VLTQDEKVVVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYHSNCEREDSNLTDLHQVESGQGNEFSLSLDDGLFFEG
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| KAA0037289.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.4e-38 | 39.02 | Show/hide |
Query: SVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFM
++ +S ++SQ LP RE+ F+IELEPDT I +A YRMA +L+ RI+D DIPKTAFRSRY H EF VM FGL AP VFM
Subjt: SVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFM
Query: DLMTEVFKEFLNPFVIVFIDDTLLYPMARRGT-------ENGIRVDSTMVEIVSEWPCLITVNEARS-------------------------------SS
+LM VFK+FL+ VIVFIDD L+Y + T G+ VD +E V+ WP TV+E RS S
Subjt: DLMTEVFKEFLNPFVIVFIDDTLLYPMARRGT-------ENGIRVDSTMVEIVSEWPCLITVNEARS-------------------------------SS
Query: VVYSDASKKSLGYVLTQDEKVVVY---------------------------------------VFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILY
V+YSDASKK LGYVL Q KVV Y +F + K F KELN+R RR L LVKDY EILY
Subjt: VVYSDASKKSLGYVLTQDEKVVVY---------------------------------------VFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILY
Query: HSNCE
H + E
Subjt: HSNCE
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| KAA0051337.1 pol protein [Cucumis melo var. makuwa] | 1.9e-37 | 33.85 | Show/hide |
Query: VLLDADSSIQGHSSAFPDVFSLDEYPLGLANVFKVPIAFGGLTADLERKWNPNSKFKVLFCLIKTLELRNLSKVVLDDIRRVARAVAWLGYGMQLQITWY
VL D+ SS SS F L+ PLG P L+ + + VL + L++R+ V+L A + + ++
Subjt: VLLDADSSIQGHSSAFPDVFSLDEYPLGLANVFKVPIAFGGLTADLERKWNPNSKFKVLFCLIKTLELRNLSKVVLDDIRRVARAVAWLGYGMQLQITWY
Query: QSPVFRFCRLAYIVSIRFSHSQAQANMPRHSQANQNKLSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLV---REVGFSIELEPDTTPIPKAL
P F+F R A IV I S +A +Q L+S + + + S +P ++R+ D V LP + RE+ F+IELE T PI +
Subjt: QSPVFRFCRLAYIVSIRFSHSQAQANMPRHSQANQNKLSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLV---REVGFSIELEPDTTPIPKAL
Query: YRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--
YRMA A+L+ RIKD DIPKTAFRSRY+HYEF VM FGL APAVF+DLM VFK+FL+ FVIVFIDD L+Y E
Subjt: YRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--
Query: --NGIRVDSTMVEIVSEWPCLITVNEARS-------------------------------------SSVVYSDASKKSLGYVLTQDEKVVVYVFHQ--SQ
G+ VD +E V+ WP V+E RS S V+YSDASKK LG VL Q KVV Y Q S
Subjt: --NGIRVDSTMVEIVSEWPCLITVNEARS-------------------------------------SSVVYSDASKKSLGYVLTQDEKVVVYVFHQ--SQ
Query: EPKVFLHP------KELNVRHRR-LSLVKDYVVEILYH-----------------------------SNCERED-----SNLTDLH------QVESGQGN
E H KELN+R RR L LVKDY EILYH + ER + L D + VE+ QG
Subjt: EPKVFLHP------KELNVRHRR-LSLVKDYVVEILYH-----------------------------SNCERED-----SNLTDLH------QVESGQGN
Query: EFSLSLDDGLFFEG
FS+S DDGL FEG
Subjt: EFSLSLDDGLFFEG
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| TYK21249.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-37 | 34.81 | Show/hide |
Query: LSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTA
L+S+ + R P+ S ++P ++R+ D L RE+ F+IELE T PI +A YRMA A+L+ RI+D DIPKTA
Subjt: LSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTA
Query: FRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--------------------------------------NGIR
FRSRY HYEF VM FGL AP VFMDLM VFK+FL+ FVIVFIDD +Y E G+
Subjt: FRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--------------------------------------NGIR
Query: VDSTMVEIVSEWPCLITVNEARS--------------------------------------------------------------SSVVYSDASKKSLGY
VD +E VS WP TV+E RS S V+YSDASKK LG
Subjt: VDSTMVEIVSEWPCLITVNEARS--------------------------------------------------------------SSVVYSDASKKSLGY
Query: VLTQDEKVVVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYHSNCEREDSNLTDLHQVESGQGNEFSLSLDDGLFFEG
VL Q ++ ++ H+S K F ELN+R RR L LVKDY EILYH +E+GQG +FS+S DDGL FEG
Subjt: VLTQDEKVVVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYHSNCEREDSNLTDLHQVESGQGNEFSLSLDDGLFFEG
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| TYK23874.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-39 | 33.6 | Show/hide |
Query: VLLDADSSIQGHSSAFPDVFSLDEYPLGLANVFKVPIAFGGLTADLERKWNPNSKFKVLFCLIKTLELRNLSKVVLDDIRRVARAVAWLGYGMQLQITWY
VL D+ SS SS F L+ PLG P L+ + + VL + L++R+ ++ D A + ++
Subjt: VLLDADSSIQGHSSAFPDVFSLDEYPLGLANVFKVPIAFGGLTADLERKWNPNSKFKVLFCLIKTLELRNLSKVVLDDIRRVARAVAWLGYGMQLQITWY
Query: QSPVFRFCRLAYIVSIRFSHSQAQANMPRHSQANQNKLSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLV---REVGFSIELEPDTTPIPKAL
P F+F R A IV I S +A+ +Q L+S + R P+ S +P ++R+ +D V LP + RE+ F+IELE T PI +
Subjt: QSPVFRFCRLAYIVSIRFSHSQAQANMPRHSQANQNKLSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLV---REVGFSIELEPDTTPIPKAL
Query: YRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--
YRMA A+L+ RIKD DIPKTAFRSRY+HYEF VM FGL APAVF+DLM VFK+FL+ FVIVFIDD L+Y E
Subjt: YRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--
Query: --NGIRVDSTMVEIVSEWPCLITVNEARS---------------------------------------------SSVVYSDASKKSLGYVLTQ---DEKV
G+ VD +E V+ WP TV+E RS S V+YSDASKK LG VL EK+
Subjt: --NGIRVDSTMVEIVSEWPCLITVNEARS---------------------------------------------SSVVYSDASKKSLGYVLTQ---DEKV
Query: VVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYH-------------------SNCEREDSNLTDLHQ-------------VESGQGNEFSLS
++ H+S K F KELN+R RR L LVKDY EILYH + ++ L D + VE+ QG FS+S
Subjt: VVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYH-------------------SNCEREDSNLTDLHQ-------------VESGQGNEFSLS
Query: LDDGLFFEG
DDGL FEG
Subjt: LDDGLFFEG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2F0 Ty3-gypsy retrotransposon protein | 5.3e-38 | 34.81 | Show/hide |
Query: LSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTA
L+S+ + R P+ S ++P ++R+ D L RE+ F+IELE T PI +A YRMA A+L+ RI+D DIPKTA
Subjt: LSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTA
Query: FRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--------------------------------------NGIR
FRSRY HYEF VM FGL AP VFMDLM VFK+FL+ FVIVFIDD +Y E G+
Subjt: FRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--------------------------------------NGIR
Query: VDSTMVEIVSEWPCLITVNEARS--------------------------------------------------------------SSVVYSDASKKSLGY
VD +E VS WP TV+E RS S V+YSDASKK LG
Subjt: VDSTMVEIVSEWPCLITVNEARS--------------------------------------------------------------SSVVYSDASKKSLGY
Query: VLTQDEKVVVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYHSNCEREDSNLTDLHQVESGQGNEFSLSLDDGLFFEG
VL Q ++ ++ H+S K F ELN+R RR L LVKDY EILYH +E+GQG +FS+S DDGL FEG
Subjt: VLTQDEKVVVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYHSNCEREDSNLTDLHQVESGQGNEFSLSLDDGLFFEG
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| A0A5A7UA89 Pol protein | 9.0e-38 | 33.85 | Show/hide |
Query: VLLDADSSIQGHSSAFPDVFSLDEYPLGLANVFKVPIAFGGLTADLERKWNPNSKFKVLFCLIKTLELRNLSKVVLDDIRRVARAVAWLGYGMQLQITWY
VL D+ SS SS F L+ PLG P L+ + + VL + L++R+ V+L A + + ++
Subjt: VLLDADSSIQGHSSAFPDVFSLDEYPLGLANVFKVPIAFGGLTADLERKWNPNSKFKVLFCLIKTLELRNLSKVVLDDIRRVARAVAWLGYGMQLQITWY
Query: QSPVFRFCRLAYIVSIRFSHSQAQANMPRHSQANQNKLSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLV---REVGFSIELEPDTTPIPKAL
P F+F R A IV I S +A +Q L+S + + + S +P ++R+ D V LP + RE+ F+IELE T PI +
Subjt: QSPVFRFCRLAYIVSIRFSHSQAQANMPRHSQANQNKLSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLV---REVGFSIELEPDTTPIPKAL
Query: YRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--
YRMA A+L+ RIKD DIPKTAFRSRY+HYEF VM FGL APAVF+DLM VFK+FL+ FVIVFIDD L+Y E
Subjt: YRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--
Query: --NGIRVDSTMVEIVSEWPCLITVNEARS-------------------------------------SSVVYSDASKKSLGYVLTQDEKVVVYVFHQ--SQ
G+ VD +E V+ WP V+E RS S V+YSDASKK LG VL Q KVV Y Q S
Subjt: --NGIRVDSTMVEIVSEWPCLITVNEARS-------------------------------------SSVVYSDASKKSLGYVLTQDEKVVVYVFHQ--SQ
Query: EPKVFLHP------KELNVRHRR-LSLVKDYVVEILYH-----------------------------SNCERED-----SNLTDLH------QVESGQGN
E H KELN+R RR L LVKDY EILYH + ER + L D + VE+ QG
Subjt: EPKVFLHP------KELNVRHRR-LSLVKDYVVEILYH-----------------------------SNCERED-----SNLTDLH------QVESGQGN
Query: EFSLSLDDGLFFEG
FS+S DDGL FEG
Subjt: EFSLSLDDGLFFEG
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| A0A5D3C3E0 Ty3-gypsy retrotransposon protein | 4.0e-38 | 39.02 | Show/hide |
Query: SVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFM
++ +S ++SQ LP RE+ F+IELEPDT I +A YRMA +L+ RI+D DIPKTAFRSRY H EF VM FGL AP VFM
Subjt: SVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFM
Query: DLMTEVFKEFLNPFVIVFIDDTLLYPMARRGT-------ENGIRVDSTMVEIVSEWPCLITVNEARS-------------------------------SS
+LM VFK+FL+ VIVFIDD L+Y + T G+ VD +E V+ WP TV+E RS S
Subjt: DLMTEVFKEFLNPFVIVFIDDTLLYPMARRGT-------ENGIRVDSTMVEIVSEWPCLITVNEARS-------------------------------SS
Query: VVYSDASKKSLGYVLTQDEKVVVY---------------------------------------VFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILY
V+YSDASKK LGYVL Q KVV Y +F + K F KELN+R RR L LVKDY EILY
Subjt: VVYSDASKKSLGYVLTQDEKVVVY---------------------------------------VFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILY
Query: HSNCE
H + E
Subjt: HSNCE
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| A0A5D3DDB2 Ty3-gypsy retrotransposon protein | 5.3e-38 | 34.81 | Show/hide |
Query: LSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTA
L+S+ + R P+ S ++P ++R+ D L RE+ F+IELE T PI +A YRMA A+L+ RI+D DIPKTA
Subjt: LSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLVREVGFSIELEPDTTPIPKALYRMALAKLR------------------SSRIKDEDIPKTA
Query: FRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--------------------------------------NGIR
FRSRY HYEF VM FGL AP VFMDLM VFK+FL+ FVIVFIDD +Y E G+
Subjt: FRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--------------------------------------NGIR
Query: VDSTMVEIVSEWPCLITVNEARS--------------------------------------------------------------SSVVYSDASKKSLGY
VD +E VS WP TV+E RS S V+YSDASKK LG
Subjt: VDSTMVEIVSEWPCLITVNEARS--------------------------------------------------------------SSVVYSDASKKSLGY
Query: VLTQDEKVVVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYHSNCEREDSNLTDLHQVESGQGNEFSLSLDDGLFFEG
VL Q ++ ++ H+S K F ELN+R RR L LVKDY EILYH +E+GQG +FS+S DDGL FEG
Subjt: VLTQDEKVVVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYHSNCEREDSNLTDLHQVESGQGNEFSLSLDDGLFFEG
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| A0A5D3DJQ7 Ty3-gypsy retrotransposon protein | 7.4e-40 | 33.6 | Show/hide |
Query: VLLDADSSIQGHSSAFPDVFSLDEYPLGLANVFKVPIAFGGLTADLERKWNPNSKFKVLFCLIKTLELRNLSKVVLDDIRRVARAVAWLGYGMQLQITWY
VL D+ SS SS F L+ PLG P L+ + + VL + L++R+ ++ D A + ++
Subjt: VLLDADSSIQGHSSAFPDVFSLDEYPLGLANVFKVPIAFGGLTADLERKWNPNSKFKVLFCLIKTLELRNLSKVVLDDIRRVARAVAWLGYGMQLQITWY
Query: QSPVFRFCRLAYIVSIRFSHSQAQANMPRHSQANQNKLSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLV---REVGFSIELEPDTTPIPKAL
P F+F R A IV I S +A+ +Q L+S + R P+ S +P ++R+ +D V LP + RE+ F+IELE T PI +
Subjt: QSPVFRFCRLAYIVSIRFSHSQAQANMPRHSQANQNKLSSSEEARYPQDSKKYDPQSSLIRQSVDSSAVISQNLPLV---REVGFSIELEPDTTPIPKAL
Query: YRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--
YRMA A+L+ RIKD DIPKTAFRSRY+HYEF VM FGL APAVF+DLM VFK+FL+ FVIVFIDD L+Y E
Subjt: YRMALAKLR------------------SSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARRGTE--
Query: --NGIRVDSTMVEIVSEWPCLITVNEARS---------------------------------------------SSVVYSDASKKSLGYVLTQ---DEKV
G+ VD +E V+ WP TV+E RS S V+YSDASKK LG VL EK+
Subjt: --NGIRVDSTMVEIVSEWPCLITVNEARS---------------------------------------------SSVVYSDASKKSLGYVLTQ---DEKV
Query: VVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYH-------------------SNCEREDSNLTDLHQ-------------VESGQGNEFSLS
++ H+S K F KELN+R RR L LVKDY EILYH + ++ L D + VE+ QG FS+S
Subjt: VVYVFHQSQEPKVFLHPKELNVRHRR-LSLVKDYVVEILYH-------------------SNCEREDSNLTDLHQ-------------VESGQGNEFSLS
Query: LDDGLFFEG
DDGL FEG
Subjt: LDDGLFFEG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.5e-05 | 38.6 | Show/hide |
Query: EDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLY
E + KTAF +++ HYE+ M FGL APA F M ++ + LN +V++DD +++
Subjt: EDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLY
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| P19199 Polyprotein P3 | 2.6e-05 | 36.96 | Show/hide |
Query: IKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTL------------LYPMARRGTENGIRVDSTMVEI
+++E +P TAF + YE+ VM FGL APA+F M VFK F+ V+IDD L LY M + ENG+ + T ++I
Subjt: IKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTL------------LYPMARRGTENGIRVDSTMVEI
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 5.1e-06 | 32.41 | Show/hide |
Query: PDTTPIP----------KALY--RMALAK-LRSSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARR
PD PIP K Y + LAK + +E I KTAF ++ HYE+ M FGL APA F M + + LN +V++DD +++ +
Subjt: PDTTPIP----------KALY--RMALAK-LRSSRIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMARR
Query: GTENGIRV
N I++
Subjt: GTENGIRV
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| P31843 RNA-directed DNA polymerase homolog | 7.9e-07 | 47.54 | Show/hide |
Query: RIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLY
RI D PKT +RY +EF VM FGL A A F +LM V E+L+ FV+V++DD ++Y
Subjt: RIKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLY
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 7.9e-07 | 27.63 | Show/hide |
Query: PDTTPIPKALYRMALAKLRSSR---------------IKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMA
PDT PIP LA L +++ +K+ DIPKTAF + YEF + FGL APA+F ++ ++ +E + V+IDD +++
Subjt: PDTTPIPKALYRMALAKLRSSR---------------IKDEDIPKTAFRSRYDHYEFTVMFFGLAEAPAVFMDLMTEVFKEFLNPFVIVFIDDTLLYPMA
Query: RRGTENGIRVDSTMVEIVSEWPCLITVNEARSSSVVYSDASKKSLGYVLTQD
+ + + + S + VN +S + D + LGY++T D
Subjt: RRGTENGIRVDSTMVEIVSEWPCLITVNEARSSSVVYSDASKKSLGYVLTQD
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