| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU17915.1 hypothetical protein TSUD_330400, partial [Trifolium subterraneum] | 6.5e-95 | 35.35 | Show/hide |
Query: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
++ P +DGY+LG K P EF+ + + K NP+FE+W DQ L GWL SMT + + +TS ++W+ + GA ++++I L+
Subjt: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
Query: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTM------------LIISKETS------
+T+KG KM DYL MK ++ L+LAG P+S SDLI GLD+EY P++ + ++ W +L A L T L ++ +
Subjt: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTM------------LIISKETS------
Query: ------QDNNKIRGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFN-NPHGTSNKGNGENLAYLATSEIVCDPNWLADSGA
NN RG + + G R S +T + + + RFD+ ++ + H ++N G + +LA+ V D +W DSGA
Subjt: ------QDNNKIRGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFN-NPHGTSNKGNGENLAYLATSEIVCDPNWLADSGA
Query: TSHVTRGDHRSVGVGFRLKPTPTTDMSVSGGRFLSSVLAVFGEPTDRQVGFTLRKTDSDRNYKKTDRPTSV---------RRAKRP-----LELIHCDLW
++HVT H++ + + V G L V T R + LR T D Y+ +++ +S R+ P LEL+H D+W
Subjt: TSHVTRGDHRSVGVGFRLKPTPTTDMSVSGGRFLSSVLAVFGEPTDRQVGFTLRKTDSDRNYKKTDRPTSV---------RRAKRP-----LELIHCDLW
Query: GPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRH
GP+PI S++ ++YY+ +D+F+RFT ++PLK K + +AFIQ+K +VE + + +IKT+Q D GGE+++ + GI+FR C +TSQQN ERKHRH
Subjt: GPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRH
Query: IVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
I E GLTLLAQ+ MPL +WW+AF++AV++INRLP+PV +N SP+ L K PDY L+ FG AC+PCL+PY HK QFH+T L + KG
Subjt: IVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| GAU21262.1 hypothetical protein TSUD_286720 [Trifolium subterraneum] | 4.8e-90 | 34.95 | Show/hide |
Query: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
++ P +DGY+LGTK P +F+ + K+ NP++EEW DQAL GWL SM + + +TSKE+W + + GA +++RI L+
Subjt: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
Query: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTMLIISKETSQDNNKIRGKTIKEIKTGD
NT+KG KM YL MK ++ L++AG+P+S SDL+ GLDAE+ P++ + ++ SW +L A +L Q NN I
Subjt: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTMLIISKETSQDNNKIRGKTIKEIKTGD
Query: IRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTRGDHRSVGVGFRLKPTPTTD
++S T + + T R P+ + G + A++ + D W DSGA++HVT + + +
Subjt: IRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTRGDHRSVGVGFRLKPTPTTD
Query: MSVSGGRFLSSVLAVFGEPTDRQVGFTLRKTDSDRNYKKTDRPTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNA
M ++ +F L F +S AK PL+LIH D+WGP+PI S++ +YY+ +D+FSRFT +FPLK K E ++A
Subjt: MSVSGGRFLSSVLAVFGEPTDRQVGFTLRKTDSDRNYKKTDRPTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNA
Query: FIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLN
F Q+K +VE + + KI+ +Q D GGE++ + GI+FR C +TSQQN ERKHRH+ E+G+TLLAQ+ MPL +WW+AF+++V++INRLP+ V
Subjt: FIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLN
Query: NSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
N SP+ LF+ PDY L+ FG AC+PCL+PY HK QFH+T L + KG
Subjt: NSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 1.6e-85 | 32.73 | Show/hide |
Query: VDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGSTK
+DGY+LGT P +F+ S ++ K+ NP F +W DQAL GWL SM + + +TSK++W + + GA +K+RI L+ NT+KG K
Subjt: VDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGSTK
Query: MLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTMLIISKETSQDN--------------NKIRGKTIKEI
M +YL MK S+ L+LAG+P+S SDL+ GLDAEY P++ + ++ SW ++ A +L Q N NK + K
Subjt: MLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTMLIISKETSQDN--------------NKIRGKTIKEI
Query: KTGDIRTISPQTI----SPQTMVLEIATILEVEGEEDTEIKERFDEDF-NNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTR--------GD
G+ R + + + M + G + RFD + + T G + A++A+ D W DSGA +HVT +
Subjt: KTGDIRTISPQTI----SPQTMVLEIATILEVEGEEDTEIKERFDEDF-NNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTR--------GD
Query: HRS-----VGVGFRLK--------------------PTPTTD-MSVSGGRFLSSVLAVFG----EPTDRQVGFTLRK-------------------TDSD
H VG G +LK P T + +SVS +++L F D+ G TL K + +
Subjt: HRS-----VGVGFRLK--------------------PTPTTD-MSVSGGRFLSSVLAVFG----EPTDRQVGFTLRK-------------------TDSD
Query: RNYKKTDRPT---------------------------------------SVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKG
++K P S + PL LIH D+WGP+PI S + ++YY+ +D+FSRFT +FPLK K
Subjt: RNYKKTDRPT---------------------------------------SVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKG
Query: EALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLP
+ ++AFIQ+K L E + + KIK +Q D GGE+++ + GI+FR C +TSQQN ERKHRH+ E+GLTLLAQ+ MPLR+WW+AF++AV++INRLP
Subjt: EALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLP
Query: TPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
+ V N SP+ +FK PDY L+ FG AC+PCL+PY HK QFH+T + + KG
Subjt: TPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 1.0e-87 | 31.92 | Show/hide |
Query: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
++ P +DGY+LG K P EF+ + + K NP+FE+W DQ L GWL SMT + + +TS ++W + + GA ++++I L+
Subjt: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
Query: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTM------------------LIISKETS
+T+KG KM DYL MK ++ L+LAG P+S SDLI GLD+EY P++ + ++ SW +L A L T ++K++
Subjt: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTM------------------LIISKETS
Query: Q-------------DNNKIRGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFN-NPHGTSNKGNGENLAYLATSEIVCDPN
NN RG + + G R S +T + ++ + RFD+ ++ + H +N G + A+LA+ + D +
Subjt: Q-------------DNNKIRGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFN-NPHGTSNKGNGENLAYLATSEIVCDPN
Query: WLADSGATSHVTR--------GDHRS-----VGVGFRLKPTPTTD---------------------MSVSGGRFLSSVLAVFGE----PTDRQVG-----
W DSGA++HVT +H VG G +L+ T +SVS +++L F E D+ G
Subjt: WLADSGATSHVTR--------GDHRS-----VGVGFRLKPTPTTD---------------------MSVSGGRFLSSVLAVFGE----PTDRQVG-----
Query: -------FTLRKTDS-------DRNYKKTDRP---------------------------------------TSVRRAKRPLELIHCDLWGPSPIPSTAVY
+ L + DS + ++K P TS AK LEL+H D+WGP+PI S++ +
Subjt: -------FTLRKTDS-------DRNYKKTDRP---------------------------------------TSVRRAKRPLELIHCDLWGPSPIPSTAVY
Query: RYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQ
+YY+ +D+F+RFT ++PLK K + +AFIQ+K +VE + KIKT+Q D GGE++ + GI+FR C +TSQQN ERKHRHI E GLTLLAQ
Subjt: RYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQ
Query: SSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
+ MPL +WW+AF++AV++INRLP+ V +N SP+ L K PDY L+ FG AC+P L+PY HK QFH+T L + KG
Subjt: SSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 4.2e-86 | 33.09 | Show/hide |
Query: DGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGSTKM
DGY+LGTK P +F+ S K+ NP +++W DQAL GWL SMT + + +TSK++W + + GA +++RI L+ NT K KM
Subjt: DGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGSTKM
Query: LDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHA------------------ILQTMLIISKETSQDNNKI-----
YLA MK ++ L+LAG+P+S SDL+ GLD+EY P++ + ++ SW + A L + + NK
Subjt: LDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHA------------------ILQTMLIISKETSQDNNKI-----
Query: -RGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTRGDHRS-
RG + ++ G R + P I I G + RFD+ + + + +G G + A++A+ D W DSGA++HVT H+S
Subjt: -RGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTRGDHRS-
Query: ---------------VGVGFRLK--------------------PTPTTD-MSVSGGRFLSSVLAVFGE--------------------------------
VG G +LK P T + +SVS ++ L F E
Subjt: ---------------VGVGFRLK--------------------PTPTTD-MSVSGGRFLSSVLAVFGE--------------------------------
Query: PTD--------------RQVGF----TLRKTDSDRNYK--KTDR-----------------PTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDN
PT+ R++G L K D N K +D+ TS AK PL+LIH D+WGP+PI S + ++YY+ +D+
Subjt: PTD--------------RQVGF----TLRKTDSDRNYK--KTDR-----------------PTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDN
Query: FSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWW
FSRFT +FPLK K E ++AF Q+K LVE + + KIK ++ D GGE++ GI+F+ C +TSQQN ERKHRH+ E+GLTLLAQ+ MPL +WW
Subjt: FSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWW
Query: DAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
+AF++AV++INRLP+ V N SP+ +FK PDYT L+ FG AC+PCL+PY HK QFH+T L + KG
Subjt: DAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 4.9e-88 | 31.92 | Show/hide |
Query: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
++ P +DGY+LG K P EF+ + + K NP+FE+W DQ L GWL SMT + + +TS ++W + + GA ++++I L+
Subjt: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
Query: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTM------------------LIISKETS
+T+KG KM DYL MK ++ L+LAG P+S SDLI GLD+EY P++ + ++ SW +L A L T ++K++
Subjt: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTM------------------LIISKETS
Query: Q-------------DNNKIRGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFN-NPHGTSNKGNGENLAYLATSEIVCDPN
NN RG + + G R S +T + ++ + RFD+ ++ + H +N G + A+LA+ + D +
Subjt: Q-------------DNNKIRGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFN-NPHGTSNKGNGENLAYLATSEIVCDPN
Query: WLADSGATSHVTR--------GDHRS-----VGVGFRLKPTPTTD---------------------MSVSGGRFLSSVLAVFGE----PTDRQVG-----
W DSGA++HVT +H VG G +L+ T +SVS +++L F E D+ G
Subjt: WLADSGATSHVTR--------GDHRS-----VGVGFRLKPTPTTD---------------------MSVSGGRFLSSVLAVFGE----PTDRQVG-----
Query: -------FTLRKTDS-------DRNYKKTDRP---------------------------------------TSVRRAKRPLELIHCDLWGPSPIPSTAVY
+ L + DS + ++K P TS AK LEL+H D+WGP+PI S++ +
Subjt: -------FTLRKTDS-------DRNYKKTDRP---------------------------------------TSVRRAKRPLELIHCDLWGPSPIPSTAVY
Query: RYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQ
+YY+ +D+F+RFT ++PLK K + +AFIQ+K +VE + KIKT+Q D GGE++ + GI+FR C +TSQQN ERKHRHI E GLTLLAQ
Subjt: RYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQ
Query: SSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
+ MPL +WW+AF++AV++INRLP+ V +N SP+ L K PDY L+ FG AC+P L+PY HK QFH+T L + KG
Subjt: SSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 2.1e-86 | 33.09 | Show/hide |
Query: DGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGSTKM
DGY+LGTK P +F+ S K+ NP +++W DQAL GWL SMT + + +TSK++W + + GA +++RI L+ NT K KM
Subjt: DGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGSTKM
Query: LDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHA------------------ILQTMLIISKETSQDNNKI-----
YLA MK ++ L+LAG+P+S SDL+ GLD+EY P++ + ++ SW + A L + + NK
Subjt: LDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHA------------------ILQTMLIISKETSQDNNKI-----
Query: -RGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTRGDHRS-
RG + ++ G R + P I I G + RFD+ + + + +G G + A++A+ D W DSGA++HVT H+S
Subjt: -RGKTIKEIKTGDIRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTRGDHRS-
Query: ---------------VGVGFRLK--------------------PTPTTD-MSVSGGRFLSSVLAVFGE--------------------------------
VG G +LK P T + +SVS ++ L F E
Subjt: ---------------VGVGFRLK--------------------PTPTTD-MSVSGGRFLSSVLAVFGE--------------------------------
Query: PTD--------------RQVGF----TLRKTDSDRNYK--KTDR-----------------PTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDN
PT+ R++G L K D N K +D+ TS AK PL+LIH D+WGP+PI S + ++YY+ +D+
Subjt: PTD--------------RQVGF----TLRKTDSDRNYK--KTDR-----------------PTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDN
Query: FSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWW
FSRFT +FPLK K E ++AF Q+K LVE + + KIK ++ D GGE++ GI+F+ C +TSQQN ERKHRH+ E+GLTLLAQ+ MPL +WW
Subjt: FSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWW
Query: DAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
+AF++AV++INRLP+ V N SP+ +FK PDYT L+ FG AC+PCL+PY HK QFH+T L + KG
Subjt: DAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| A0A2Z6M732 Integrase catalytic domain-containing protein | 2.3e-90 | 34.95 | Show/hide |
Query: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
++ P +DGY+LGTK P +F+ + K+ NP++EEW DQAL GWL SM + + +TSKE+W + + GA +++RI L+
Subjt: ILTPPQHSTHVDGYVLGTKSRPSEFLESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGT
Query: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTMLIISKETSQDNNKIRGKTIKEIKTGD
NT+KG KM YL MK ++ L++AG+P+S SDL+ GLDAE+ P++ + ++ SW +L A +L Q NN I
Subjt: LQNTKKGSTKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTMLIISKETSQDNNKIRGKTIKEIKTGD
Query: IRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTRGDHRSVGVGFRLKPTPTTD
++S T + + T R P+ + G + A++ + D W DSGA++HVT + + +
Subjt: IRTISPQTISPQTMVLEIATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGENLAYLATSEIVCDPNWLADSGATSHVTRGDHRSVGVGFRLKPTPTTD
Query: MSVSGGRFLSSVLAVFGEPTDRQVGFTLRKTDSDRNYKKTDRPTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNA
M ++ +F L F +S AK PL+LIH D+WGP+PI S++ +YY+ +D+FSRFT +FPLK K E ++A
Subjt: MSVSGGRFLSSVLAVFGEPTDRQVGFTLRKTDSDRNYKKTDRPTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNA
Query: FIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLN
F Q+K +VE + + KI+ +Q D GGE++ + GI+FR C +TSQQN ERKHRH+ E+G+TLLAQ+ MPL +WW+AF+++V++INRLP+ V
Subjt: FIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLN
Query: NSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
N SP+ LF+ PDY L+ FG AC+PCL+PY HK QFH+T L + KG
Subjt: NSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| A0A803PM38 Uncharacterized protein | 6.6e-93 | 34.72 | Show/hide |
Query: VDGYVLGTKSRPSEFLESPGEAGKLQLT--PNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGS
+DGY+ GT +P EFL S G + NP FE+W DQ L GWL+GSMT + + + +S +W ALE+++GA SKA++++ R +Q +KG+
Subjt: VDGYVLGTKSRPSEFLESPGEAGKLQLT--PNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGS
Query: TKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTM-------------------------LIISK----
M DYL +Q ++ L LAG P + L+S V GLD EY+P++ I+ + ++WQ+L +L ++ + +K
Subjt: TKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTM-------------------------LIISK----
Query: ---ETSQDNNKIRGKTIKEIKTGDIRTISPQTISPQTMVLE--------------------IATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGE---
+ +NN G + R +T P+ + I ++ +E+ KE+ N + G G
Subjt: ---ETSQDNNKIRGKTIKEIKTGDIRTISPQTISPQTMVLE--------------------IATILEVEGEEDTEIKERFDEDFNNPHGTSNKGNGE---
Query: -NLAYLATSEIVCDP----NWLADSGATS-------------HVTRGDHRSVGVGFRLK--------PTPTTDMSVS---------GGRFLSSVLA----
+ + L EI+ P N L+ S TS V + V + +LK PT TT MS + G +S+V +
Subjt: -NLAYLATSEIVCDP----NWLADSGATS-------------HVTRGDHRSVGVGFRLK--------PTPTTDMSVS---------GGRFLSSVLA----
Query: ----------------VFGEPTDRQVGFTLRK------------TDSDRNYKKTDRPTSV--RRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSR
G P+ R + L K D+ + K P V +RA PLEL+H D+WGPSPI S +RYYI +D+FSR
Subjt: ----------------VFGEPTDRQVGFTLRK------------TDSDRNYKKTDRPTSV--RRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSR
Query: FTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAF
+T ++PLK K EAL AF+Q+K LVE + + ++K +Q+DWGGE++ F F HGI F+HPC HTS QN ERKHRHIVEMGLTLLAQ+ +P ++WWDAF
Subjt: FTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAF
Query: TSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
+AV++INRLPTPVL +P+ LFK PDY FL+VFG +CFPCLR YQ+HKFQFHST +L KG
Subjt: TSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| A0A803QCY3 Uncharacterized protein | 1.7e-96 | 35.57 | Show/hide |
Query: VDGYVLGTKSRPSEFL--ESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGS
+DG++ GT PSE++ S + K T NP+FE W DQ L GWL+ SMT + + + ++ +W ALEQ+YGA SK++++ R +Q TKKG
Subjt: VDGYVLGTKSRPSEFL--ESPGEAGKLQLTPNPKFEEWTTMDQALSGWLFGSMTPAVTADAVSFKTSKEVWKALEQMYGATSKARINQLRGTLQNTKKGS
Query: TKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTMLIISKETSQDNNKIRGKTIKEIKTGDIRTISPQT
T M++YL K +++L LAG P + L + V LD Y+ ++ I+ + +SWQEL +L + + + NN RG+ G R
Subjt: TKMLDYLATMKQASENLQLAGAPVSLSDLISYVFGGLDAEYIPIICTIQEKEISSWQELHAILQTMLIISKETSQDNNKIRGKTIKEIKTGDIRTISPQT
Query: ISPQTMVLEIATILEVEGEED---TEIKERFDEDF--NNPHGTSNKGNGEN----LAYLATSEIVCDPNWLADSGATSHVTR-----------GDHRSVG
S T +V G+ D FD+ + ++PH ++ G+N A++AT E + W ADSGA++++T G V
Subjt: ISPQTMVLEIATILEVEGEED---TEIKERFDEDF--NNPHGTSNKGNGEN----LAYLATSEIVCDPNWLADSGATSHVTR-----------GDHRSVG
Query: VG-------------------------------------FRLKPTPTTDMSV-----SGGRFLSSVL------------AVFGEPTDRQVGFTLRKTD--
VG F TTD V S F+ + ++ T R LR +
Subjt: VG-------------------------------------FRLKPTPTTDMSV-----SGGRFLSSVL------------AVFGEPTDRQVGFTLRKTD--
Query: ---SDRNYKKTDR---------------PTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDL
SD N D S +A + L+L+H DLWGPSPI S ++YY+ VD+ +RFT ++PLK K EA +AF+ +K+L E + +
Subjt: ---SDRNYKKTDR---------------PTSVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDL
Query: KIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPD
KIK L++D GGE++ S F+ HGI F H C HTS QN ERKHRHIVEMGLTLLAQS MPL++WWDAF++AV++INRLPTP+L++ +P+ L K PD
Subjt: KIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPD
Query: YTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
Y FL+ FG ACFPCLRPYQ+HKFQFHS +L KG
Subjt: YTFLRVFGSACFPCLRPYQSHKFQFHSTNVFSLAIVSITKG
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P59223 40S ribosomal protein S13-1 | 3.3e-25 | 67.71 | Show/hide |
Query: ESMMPKGKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDSKFRLILVESRIHCLTR
ES+ K+ +Q + G P QVKSVTGSKILRILKAHGL PEI EDLYHLIKK V+I+KHLERNRKDKDSKFRLILVESRIH L R
Subjt: ESMMPKGKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDSKFRLILVESRIHCLTR
|
|
| P59224 40S ribosomal protein S13-2 | 3.3e-25 | 67.71 | Show/hide |
Query: ESMMPKGKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDSKFRLILVESRIHCLTR
ES+ K+ +Q + G P QVKSVTGSKILRILKAHGL PEI EDLYHLIKK V+I+KHLERNRKDKDSKFRLILVESRIH L R
Subjt: ESMMPKGKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDSKFRLILVESRIHCLTR
|
|
| Q05761 40S ribosomal protein S13 | 4.3e-25 | 62.07 | Show/hide |
Query: SLPYTFTLP--LLALLQNWESMMPK-GKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDS
+LPY T P L + E M+ K K+ + +Q L G PL VKSVTGSKILRILKAHGL PEI EDLY LIKK V+I+KHLERNRKDKDS
Subjt: SLPYTFTLP--LLALLQNWESMMPK-GKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDS
Query: KFRLILVESRIHCLTR
KFRLILVESRIH L R
Subjt: KFRLILVESRIHCLTR
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-46 | 48.96 | Show/hide |
Query: SVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHP
S + RPLE I+ D+W SPI S YRYY+ VD+F+R+T ++PLK K + FI +K L+E + +I T SD GGEF + + QHGI
Subjt: SVRRAKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHP
Query: CHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHK
HT + N + ERKHRHIVE GLTLL+ +S+P +W AF AV++INRLPTP+L SP+ LF + P+Y LRVFG AC+P LRPY HK
Subjt: CHHTSQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHK
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.1e-48 | 50 | Show/hide |
Query: AKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHT
+ +PLE I+ D+W SPI S YRYY+ VD+F+R+T ++PLK K + + FI +K+LVE + +I TL SD GGEF +L QHGI HT
Subjt: AKRPLELIHCDLWGPSPIPSTAVYRYYISLVDNFSRFTHVFPLKTKGEALNAFIQYKALVEIKLDLKIKTLQSDWGGEFRSFSPFLKQHGIEFRHPCHHT
Query: SQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQ
+ N + ERKHRHIVEMGLTLL+ +S+P +W AF+ AV++INRLPTP+L SP+ LF P+Y L+VFG AC+P LRPY HK +
Subjt: SQQNEIVERKHRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACFPCLRPYQSHKFQ
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G60770.1 Ribosomal protein S13/S15 | 2.4e-26 | 67.71 | Show/hide |
Query: ESMMPKGKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDSKFRLILVESRIHCLTR
ES+ K+ +Q + G P QVKSVTGSKILRILKAHGL PEI EDLYHLIKK V+I+KHLERNRKDKDSKFRLILVESRIH L R
Subjt: ESMMPKGKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDSKFRLILVESRIHCLTR
|
|
| AT4G00100.1 ribosomal protein S13A | 2.4e-26 | 67.71 | Show/hide |
Query: ESMMPKGKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDSKFRLILVESRIHCLTR
ES+ K+ +Q + G P QVKSVTGSKILRILKAHGL PEI EDLYHLIKK V+I+KHLERNRKDKDSKFRLILVESRIH L R
Subjt: ESMMPKGKEPRGVNQTPTLKHQLDGFPLTIQVKSVTGSKILRILKAHGLTPEISEDLYHLIKKVVSIKKHLERNRKDKDSKFRLILVESRIHCLTR
|
|
| AT4G29090.1 Ribonuclease H-like superfamily protein | 4.3e-04 | 25.25 | Show/hide |
Query: IMWRIWDHCNKAEIQNQIPSAEKLFQSIDSNLKEWE-ESYLKNQPSKRQRNLVSHAHRENSKPNCW-RLISDVAWNEKMNRKGMGWVVLDSEGSLVYFG
++WR+W + N+ + + +A+++ + + +L+EW + ++ +K Q N S R P+ W + +D WN R G+GWV+ + +G + + G
Subjt: IMWRIWDHCNKAEIQNQIPSAEKLFQSIDSNLKEWE-ESYLKNQPSKRQRNLVSHAHRENSKPNCW-RLISDVAWNEKMNRKGMGWVVLDSEGSLVYFG
|
|
| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 3.9e-05 | 35.29 | Show/hide |
Query: HRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACF
+R I+E ++L + +P F DA +AV IIN+ P+ +N P F+S P Y++LR FG +
Subjt: HRHIVEMGLTLLAQSSMPLRFWWDAFTSAVFIINRLPTPVLNNSSPWHTLFKSHPDYTFLRVFGSACF
|
|
