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Lag0007554 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007554
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr9:974336..977027
RNA-Seq ExpressionLag0007554
SyntenyLag0007554
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]1.2e-1940.6Show/hide
Query:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGH-LPKSCRYLFDVYHRIASQQMERQKISTH--------LWISFWFKGD
        C  +  LHT +GE+S+SLWD+W  GGLPIKG FY++ IP  +EL  +  +    LP +C+YLF  Y+ I   Q   +  S+          WISFW+ G 
Subjt:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGH-LPKSCRYLFDVYHRIASQQMERQKISTH--------LWISFWFKGD

Query:  SKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY
          Y KP++ + KK+S  +ST NP+GS  Q  ++
Subjt:  SKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.5e-2041.35Show/hide
Query:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGH-LPKSCRYLFDVYHRIASQQMERQKISTH--------LWISFWFKGD
        C  +  LHT +GE+S+SLWD+W  GGLPIKG FY++ IP  +EL  +  +    LP +C+YLF  Y+ I   Q   +  S+          WISFW+ G 
Subjt:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGH-LPKSCRYLFDVYHRIASQQMERQKISTH--------LWISFWFKGD

Query:  SKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY
          Y KP++ + KK+SR +ST NP+GS  Q  ++
Subjt:  SKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY

RVX10297.1 hypothetical protein CK203_016036 [Vitis vinifera]3.9e-2146.83Show/hide
Query:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSY
        C  +  LHTS GE+S+SLWD++++  LPI G FYDK IP  EEL     +   LP  CR LF  YHRI S+   +  +    W+SFW+KG  KYAKP   
Subjt:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSY

Query:  RPKKSS-----RPRSTPNPNGSITQP
         PKKS+     RP+ T NP G I  P
Subjt:  RPKKSS-----RPRSTPNPNGSITQP

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]1.2e-1941.35Show/hide
Query:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGH-LPKSCRYLFDVYHRIASQQMERQKISTH--------LWISFWFKGD
        C  +  LHT +GE+S+SLWD+W   GLPIKG FY++ IP  +EL  +  +    LP +C+YLF  Y+ I   Q   +  S+          WISFW+ G 
Subjt:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGH-LPKSCRYLFDVYHRIASQQMERQKISTH--------LWISFWFKGD

Query:  SKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY
          Y KP++ + KK SR +ST NP+GS  Q P +
Subjt:  SKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.2e-2746.76Show/hide
Query:  ESNLELDKSHFLQECLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISF
        + N ++D++     C  +  LHTS+GE+S+SLWD+W LGGL IKGRFY+++IPC ++L+ S +     P+SC +LF  Y+RI SQ+M+  +I+   WISF
Subjt:  ESNLELDKSHFLQECLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISF

Query:  WF-KGDSKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY
        W  + + KY+KP   +PKK+SRPRST NP+G   + PD+
Subjt:  WF-KGDSKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY

TrEMBL top hitse value%identityAlignment
A0A2N9EAK9 Uncharacterized protein2.7e-2028.8Show/hide
Query:  SPGIQVITRPSHLSLGSDQPLIQAKFRLITCPSHLASDSDQPLIQAKFRLITRPSHLA---SGSGQPLI--------RAKFRLITRPSHLASGSDQ----
        +P  Q IT  SH    +D+P I+    L   PS     S  P+       ++R  HL+   S S + L           + ++ T  S L SG +     
Subjt:  SPGIQVITRPSHLSLGSDQPLIQAKFRLITCPSHLASDSDQPLIQAKFRLITRPSHLA---SGSGQPLI--------RAKFRLITRPSHLASGSDQ----

Query:  PLIEAEFRLIIRPSHLASGSDQPSIE--AKFRLITRPSHLASDLSDNGKKSLVVLLDKDQPIKSGTILPIETLITESNLELDKSHFLQECLVSFNLHTSS
        PL+    R+ +  +H A+ S  P ++   +F  I +      D+    KK+L      D  I       + T   + N+   ++ F   C  +  LHTS 
Subjt:  PLIEAEFRLIIRPSHLASGSDQPSIE--AKFRLITRPSHLASDLSDNGKKSLVVLLDKDQPIKSGTILPIETLITESNLELDKSHFLQECLVSFNLHTSS

Query:  GEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSYRP-KKSSRPRS
        GEIS++LWD+ ++GGLP+ G FYD+ +P  +E+         LP SC YLF  +H ++ +      +++  W+ FWF+G  +Y KP + R  ++S R + 
Subjt:  GEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSYRP-KKSSRPRS

Query:  TPNPNGSIT
        + NP G IT
Subjt:  TPNPNGSIT

A0A2N9EXR8 PMD domain-containing protein2.7e-2028.8Show/hide
Query:  SPGIQVITRPSHLSLGSDQPLIQAKFRLITCPSHLASDSDQPLIQAKFRLITRPSHLA---SGSGQPLI--------RAKFRLITRPSHLASGSDQ----
        +P  Q IT  SH    +D+P I+    L   PS     S  P+       ++R  HL+   S S + L           + ++ T  S L SG +     
Subjt:  SPGIQVITRPSHLSLGSDQPLIQAKFRLITCPSHLASDSDQPLIQAKFRLITRPSHLA---SGSGQPLI--------RAKFRLITRPSHLASGSDQ----

Query:  PLIEAEFRLIIRPSHLASGSDQPSIE--AKFRLITRPSHLASDLSDNGKKSLVVLLDKDQPIKSGTILPIETLITESNLELDKSHFLQECLVSFNLHTSS
        PL+    R+ +  +H A+ S  P ++   +F  I +      D+    KK+L      D  I       + T   + N+   ++ F   C  +  LHTS 
Subjt:  PLIEAEFRLIIRPSHLASGSDQPSIE--AKFRLITRPSHLASDLSDNGKKSLVVLLDKDQPIKSGTILPIETLITESNLELDKSHFLQECLVSFNLHTSS

Query:  GEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSYRP-KKSSRPRS
        GEIS++LWD+ ++GGLP+ G FYD+ +P  +E+         LP SC YLF  +H ++ +      +++  W+ FWF+G  +Y KP + R  ++S R + 
Subjt:  GEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSYRP-KKSSRPRS

Query:  TPNPNGSIT
        + NP G IT
Subjt:  TPNPNGSIT

A0A2N9EZV2 Uncharacterized protein2.7e-2028.8Show/hide
Query:  SPGIQVITRPSHLSLGSDQPLIQAKFRLITCPSHLASDSDQPLIQAKFRLITRPSHLA---SGSGQPLI--------RAKFRLITRPSHLASGSDQ----
        +P  Q IT  SH    +D+P I+    L   PS     S  P+       ++R  HL+   S S + L           + ++ T  S L SG +     
Subjt:  SPGIQVITRPSHLSLGSDQPLIQAKFRLITCPSHLASDSDQPLIQAKFRLITRPSHLA---SGSGQPLI--------RAKFRLITRPSHLASGSDQ----

Query:  PLIEAEFRLIIRPSHLASGSDQPSIE--AKFRLITRPSHLASDLSDNGKKSLVVLLDKDQPIKSGTILPIETLITESNLELDKSHFLQECLVSFNLHTSS
        PL+    R+ +  +H A+ S  P ++   +F  I +      D+    KK+L      D  I       + T   + N+   ++ F   C  +  LHTS 
Subjt:  PLIEAEFRLIIRPSHLASGSDQPSIE--AKFRLITRPSHLASDLSDNGKKSLVVLLDKDQPIKSGTILPIETLITESNLELDKSHFLQECLVSFNLHTSS

Query:  GEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSYRP-KKSSRPRS
        GEIS++LWD+ ++GGLP+ G FYD+ +P  +E+         LP SC YLF  +H ++ +      +++  W+ FWF+G  +Y KP + R  ++S R + 
Subjt:  GEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSYRP-KKSSRPRS

Query:  TPNPNGSIT
        + NP G IT
Subjt:  TPNPNGSIT

A0A438JMX7 Uncharacterized protein1.9e-2146.83Show/hide
Query:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSY
        C  +  LHTS GE+S+SLWD++++  LPI G FYDK IP  EEL     +   LP  CR LF  YHRI S+   +  +    W+SFW+KG  KYAKP   
Subjt:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSY

Query:  RPKKSS-----RPRSTPNPNGSITQP
         PKKS+     RP+ T NP G I  P
Subjt:  RPKKSS-----RPRSTPNPNGSITQP

A0A5A7TX42 Uncharacterized protein1.2e-2041.35Show/hide
Query:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGH-LPKSCRYLFDVYHRIASQQMERQKISTH--------LWISFWFKGD
        C  +  LHT +GE+S+SLWD+W  GGLPIKG FY++ IP  +EL  +  +    LP +C+YLF  Y+ I   Q   +  S+          WISFW+ G 
Subjt:  CLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPCCEELLRSCNEDGH-LPKSCRYLFDVYHRIASQQMERQKISTH--------LWISFWFKGD

Query:  SKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY
          Y KP++ + KK+SR +ST NP+GS  Q  ++
Subjt:  SKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAGGCGGAAGGTTATCACTCGCCCGGAATTCAGGTTATCACTCGCCCTTCACATCTTTCCTTGGGCAGTGATCAACCCCTGATTCAGGCGAAATTCAGGCTGAT
CACTTGCCCTTCACATCTTGCCTCGGACAGTGATCAACCCTTGATTCAGGCGAAATTCAGGCTGATTACTCGCCCTTCACATCTTGCCTCAGGCAGTGGTCAACCCCTGA
TTCGGGCGAAATTCAGGCTGATCACTCGTCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTGAGGCAGAATTCAGGCTGATCATTCGTCCTTCACATCTTGCC
TCGGGCAGTGATCAACCCTCGATTGAGGCGAAATTCAGGTTGATCACTCGTCCTTCACATCTTGCCTCAGATCTTTCAGATAATGGGAAGAAAAGTCTGGTTGTTCTACT
GGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTTGATTACAGAGTCAAACCTCGAATTGGACAAATCTCATTTTCTTCAAGAATGTCTGGTGT
CCTTCAACCTCCACACTTCGTCTGGAGAAATATCCCTTTCTTTGTGGGACATGTGGAAACTTGGAGGTCTTCCCATCAAAGGGAGATTTTATGATAAAACTATTCCTTGT
TGTGAGGAATTGTTAAGATCATGCAACGAAGATGGCCATCTACCCAAGAGTTGTAGATATCTTTTTGATGTCTATCATCGTATTGCATCCCAGCAAATGGAGAGACAAAA
AATTTCTACTCACTTGTGGATTTCCTTTTGGTTTAAAGGTGATTCAAAATATGCAAAGCCTTCTTCTTATAGGCCAAAGAAATCTTCCCGTCCTCGTTCAACTCCTAATC
CAAACGGGTCTATCACCCAACCACCCGACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAGGCGGAAGGTTATCACTCGCCCGGAATTCAGGTTATCACTCGCCCTTCACATCTTTCCTTGGGCAGTGATCAACCCCTGATTCAGGCGAAATTCAGGCTGAT
CACTTGCCCTTCACATCTTGCCTCGGACAGTGATCAACCCTTGATTCAGGCGAAATTCAGGCTGATTACTCGCCCTTCACATCTTGCCTCAGGCAGTGGTCAACCCCTGA
TTCGGGCGAAATTCAGGCTGATCACTCGTCCTTCACATCTTGCCTCAGGCAGTGATCAACCCCTGATTGAGGCAGAATTCAGGCTGATCATTCGTCCTTCACATCTTGCC
TCGGGCAGTGATCAACCCTCGATTGAGGCGAAATTCAGGTTGATCACTCGTCCTTCACATCTTGCCTCAGATCTTTCAGATAATGGGAAGAAAAGTCTGGTTGTTCTACT
GGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCCAATAGAGACTTTGATTACAGAGTCAAACCTCGAATTGGACAAATCTCATTTTCTTCAAGAATGTCTGGTGT
CCTTCAACCTCCACACTTCGTCTGGAGAAATATCCCTTTCTTTGTGGGACATGTGGAAACTTGGAGGTCTTCCCATCAAAGGGAGATTTTATGATAAAACTATTCCTTGT
TGTGAGGAATTGTTAAGATCATGCAACGAAGATGGCCATCTACCCAAGAGTTGTAGATATCTTTTTGATGTCTATCATCGTATTGCATCCCAGCAAATGGAGAGACAAAA
AATTTCTACTCACTTGTGGATTTCCTTTTGGTTTAAAGGTGATTCAAAATATGCAAAGCCTTCTTCTTATAGGCCAAAGAAATCTTCCCGTCCTCGTTCAACTCCTAATC
CAAACGGGTCTATCACCCAACCACCCGACTACTGA
Protein sequenceShow/hide protein sequence
MREAEGYHSPGIQVITRPSHLSLGSDQPLIQAKFRLITCPSHLASDSDQPLIQAKFRLITRPSHLASGSGQPLIRAKFRLITRPSHLASGSDQPLIEAEFRLIIRPSHLA
SGSDQPSIEAKFRLITRPSHLASDLSDNGKKSLVVLLDKDQPIKSGTILPIETLITESNLELDKSHFLQECLVSFNLHTSSGEISLSLWDMWKLGGLPIKGRFYDKTIPC
CEELLRSCNEDGHLPKSCRYLFDVYHRIASQQMERQKISTHLWISFWFKGDSKYAKPSSYRPKKSSRPRSTPNPNGSITQPPDY