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Lag0007556 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007556
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:992964..993504
RNA-Seq ExpressionLag0007556
SyntenyLag0007556
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU20802.1 hypothetical protein TSUD_85210 [Trifolium subterraneum]1.0e-0538.04Show/hide
Query:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG
        +AN+ E   +  +L TYEQA+GQ VNL KS   ++ N+ Q   E+LS+ LGVK     G +L   + +G++K+A+F  +++R+ K     RG
Subjt:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG

GAU35032.1 hypothetical protein TSUD_103550 [Trifolium subterraneum]4.6e-0638.04Show/hide
Query:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG
        +AN+ E   +  +L TYEQA+GQ VNL+KS   ++ N+ Q   E+LS+ LGVK     G +L   + +G++K+A+F  +++R+ K     RG
Subjt:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG

GAU42133.1 hypothetical protein TSUD_351070 [Trifolium subterraneum]1.0e-0538.04Show/hide
Query:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG
        +AN+ E   +  +L TYEQA+GQ VNL KS   ++ N+ Q   E+LS+ LGVK     G +L   + +G++K+A+F  + +R+ K     RG
Subjt:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG

GAU48714.1 hypothetical protein TSUD_281070 [Trifolium subterraneum]3.5e-0639.13Show/hide
Query:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG
        +AN+ E   +  +L TYEQATGQ VNL KS   ++ N+ Q   E+LS+ LGVK     G +L   + +G++K+A+F  +++R+ K     RG
Subjt:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.4e-0735.82Show/hide
Query:  FKANLTECRRIKIVLETYEQA-TGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLGHLRSL-AQLGKNKQAMFRRLRERVGKFFRDGRGSC----
        FKA+   CR IK +LE+YE+A +GQ +NL+KS+ +V+ N  ++    + +EL V     LG    L +Q G+NK+ +F  +++RV K  +  +G      
Subjt:  FKANLTECRRIKIVLETYEQA-TGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLGHLRSL-AQLGKNKQAMFRRLRERVGKFFRDGRGSC----

Query:  SRFIEI-----KKEDALEELEEYEYEQVSRRVRL
         R + +      KED+L +LE+  Y + SRRV L
Subjt:  SRFIEI-----KKEDALEELEEYEYEQVSRRVRL

TrEMBL top hitse value%identityAlignment
A0A2Z6MPZ3 Uncharacterized protein5.0e-0638.04Show/hide
Query:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG
        +AN+ E   +  +L TYEQA+GQ VNL KS   ++ N+ Q   E+LS+ LGVK     G +L   + +G++K+A+F  +++R+ K     RG
Subjt:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG

A0A2Z6NEB9 Reverse transcriptase domain-containing protein2.2e-0638.04Show/hide
Query:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG
        +AN+ E   +  +L TYEQA+GQ VNL+KS   ++ N+ Q   E+LS+ LGVK     G +L   + +G++K+A+F  +++R+ K     RG
Subjt:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG

A0A2Z6NJN0 Reverse transcriptase domain-containing protein5.0e-0638.04Show/hide
Query:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG
        +AN+ E   +  +L TYEQA+GQ VNL KS   ++ N+ Q   E+LS+ LGVK     G +L   + +G++K+A+F  + +R+ K     RG
Subjt:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG

A0A2Z6NX03 Uncharacterized protein1.7e-0639.13Show/hide
Query:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG
        +AN+ E   +  +L TYEQATGQ VNL KS   ++ N+ Q   E+LS+ LGVK     G +L   + +G++K+A+F  +++R+ K     RG
Subjt:  KANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLG-HLRSLAQLGKNKQAMFRRLRERVGKFFRDGRG

A0A6J1DUG8 uncharacterized protein LOC1110241356.9e-0835.82Show/hide
Query:  FKANLTECRRIKIVLETYEQA-TGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLGHLRSL-AQLGKNKQAMFRRLRERVGKFFRDGRGSC----
        FKA+   CR IK +LE+YE+A +GQ +NL+KS+ +V+ N  ++    + +EL V     LG    L +Q G+NK+ +F  +++RV K  +  +G      
Subjt:  FKANLTECRRIKIVLETYEQA-TGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLGHLRSL-AQLGKNKQAMFRRLRERVGKFFRDGRGSC----

Query:  SRFIEI-----KKEDALEELEEYEYEQVSRRVRL
         R + +      KED+L +LE+  Y + SRRV L
Subjt:  SRFIEI-----KKEDALEELEEYEYEQVSRRVRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCAAGGAATTTTCCTGATGTCACACCAAATGCACACTTTAAAGCGAACTTGACAGAGTGTAGGAGGATAAAGATTGTGTTGGAGACATATGAGCAAGCCACCGG
TCAAATGGTTAACTTGGAGAAATCTGTGTGCATGGTTAATACGAATGTTGACCAAAAAAAAGCAGAGGAGTTGAGTAAGGAGCTGGGAGTCAAGAAGGCAAACTTTCTAG
GTCACCTAAGGTCGCTAGCGCAATTAGGAAAGAACAAGCAAGCGATGTTTAGGAGGCTAAGAGAGAGAGTTGGAAAGTTCTTCAGGGATGGAAGGGGAAGTTGTTCTCGG
TTCATCGAAATTAAAAAGGAAGACGCACTGGAAGAGCTGGAAGAATATGAGTACGAGCAAGTTTCGAGGAGGGTTAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCCAAGGAATTTTCCTGATGTCACACCAAATGCACACTTTAAAGCGAACTTGACAGAGTGTAGGAGGATAAAGATTGTGTTGGAGACATATGAGCAAGCCACCGG
TCAAATGGTTAACTTGGAGAAATCTGTGTGCATGGTTAATACGAATGTTGACCAAAAAAAAGCAGAGGAGTTGAGTAAGGAGCTGGGAGTCAAGAAGGCAAACTTTCTAG
GTCACCTAAGGTCGCTAGCGCAATTAGGAAAGAACAAGCAAGCGATGTTTAGGAGGCTAAGAGAGAGAGTTGGAAAGTTCTTCAGGGATGGAAGGGGAAGTTGTTCTCGG
TTCATCGAAATTAAAAAGGAAGACGCACTGGAAGAGCTGGAAGAATATGAGTACGAGCAAGTTTCGAGGAGGGTTAGGCTTTAG
Protein sequenceShow/hide protein sequence
MNPRNFPDVTPNAHFKANLTECRRIKIVLETYEQATGQMVNLEKSVCMVNTNVDQKKAEELSKELGVKKANFLGHLRSLAQLGKNKQAMFRRLRERVGKFFRDGRGSCSR
FIEIKKEDALEELEEYEYEQVSRRVRL