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Lag0007573 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007573
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionacyl-coenzyme A thioesterase 13
Genome locationchr9:1234802..1235677
RNA-Seq ExpressionLag0007573
SyntenyLag0007573
Gene Ontology termsGO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0047617 - acyl-CoA hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063084.1 CCR4-NOT transcription complex subunit 11 isoform X1 [Cucumis melo var. makuwa]3.2e-0683.33Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        MGKT+AV+NV LR+ SNGKIIAQGRHTKYLA SSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
XP_008460849.1 PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo]3.2e-0683.33Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        MGKT+AV+NV LR+ SNGKIIAQGRHTKYLA SSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
XP_022158814.1 acyl-coenzyme A thioesterase 13 isoform X1 [Momordica charantia]4.9e-0788.89Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        MGKT+AVVNV LRK SNGKI+AQGRHTKYLAISSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
XP_022158815.1 acyl-coenzyme A thioesterase 13 isoform X2 [Momordica charantia]4.9e-0788.89Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        MGKT+AVVNV LRK SNGKI+AQGRHTKYLAISSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
XP_022931994.1 acyl-coenzyme A thioesterase 13 [Cucurbita moschata]7.0e-0680.56Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        +GKT+AV+NV LR+  NGKIIAQGRHTKYLAISSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
TrEMBL top hitse value%identityAlignment
A0A1S3CCW9 acyl-coenzyme A thioesterase 131.5e-0683.33Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        MGKT+AV+NV LR+ SNGKIIAQGRHTKYLA SSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
A0A5D3BST3 CCR4-NOT transcription complex subunit 111.5e-0683.33Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        MGKT+AV+NV LR+ SNGKIIAQGRHTKYLA SSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
A0A6J1DWW4 acyl-coenzyme A thioesterase 13 isoform X22.4e-0788.89Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        MGKT+AVVNV LRK SNGKI+AQGRHTKYLAISSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
A0A6J1E0I3 acyl-coenzyme A thioesterase 13 isoform X12.4e-0788.89Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        MGKT+AVVNV LRK SNGKI+AQGRHTKYLAISSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
A0A6J1ICC5 acyl-coenzyme A thioesterase 133.4e-0680.56Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        +GKT+AV+NV LR+  NGKIIAQGRHTKYLAISSKL
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04290.1 Thioesterase superfamily protein5.8e-0666.67Show/hide
Query:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL
        +GK +AVV+V LRK + GKIIAQGRHTKY A  S L
Subjt:  MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGACCCTTGCAGTGGTTAATGTTGTATTGAGGAAGATAAGCAATGGTAAAATTATTGCTCAGGGTCGCCACACCAAGTACCTTGCCATCTCAAGCAAGCTGGT
GGAGGACGTTGCAAGGTTTATAAAGTTTAAAGAGAAGGAGATAGATTATTTTGTAACAGAAAGGGAGGAGCTGATGAAAGTTCATGGTGAAAAGATGGCAGCAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGACCCTTGCAGTGGTTAATGTTGTATTGAGGAAGATAAGCAATGGTAAAATTATTGCTCAGGGTCGCCACACCAAGTACCTTGCCATCTCAAGCAAGCTGGT
GGAGGACGTTGCAAGGTTTATAAAGTTTAAAGAGAAGGAGATAGATTATTTTGTAACAGAAAGGGAGGAGCTGATGAAAGTTCATGGTGAAAAGATGGCAGCAATGTAA
Protein sequenceShow/hide protein sequence
MGKTLAVVNVVLRKISNGKIIAQGRHTKYLAISSKLVEDVARFIKFKEKEIDYFVTEREELMKVHGEKMAAM