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Lag0007577 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007577
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBED-type domain-containing protein
Genome locationchr9:1319231..1319793
RNA-Seq ExpressionLag0007577
SyntenyLag0007577
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR003656 - Zinc finger, BED-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN71355.1 hypothetical protein VITISV_034905 [Vitis vinifera]2.1e-1559.02Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDL
        DP W YC+P++GNK+ T+CN+C LAIKSGGITRFK+HL+  D N NT+ CPN P E  +++
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDL

CAN75936.1 hypothetical protein VITISV_034804 [Vitis vinifera]1.2e-1559.02Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDL
        DP W YC+P++GNK+ T+CN+C LAIKSGGITRFK+HL+  D N NT+ CPN P E  +++
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDL

RVW39838.1 hypothetical protein CK203_083160 [Vitis vinifera]2.1e-1559.02Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDL
        DP W YC+P++GNK+ T+CN+C LAIKSGGITRFK+HL+  D N NT+ CPN P E  +++
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDL

RVW53989.1 hypothetical protein CK203_072987 [Vitis vinifera]6.4e-1737.58Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLE-----------------------------------GYEDLDFND
        DP W YC+P++GNK+ T+CN+C LAIKSGGITRFK+HL+  D N NT+ CPN P E                                   G +D D  D
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLE-----------------------------------GYEDLDFND

Query:  DEDDMFPPDMTYTERRQYKEVLRNSKK---TAHEEEEFRRSGLQQGQGS
        D+  M+P DM   ER  Y+E +R SK       ++E F +   + G+ S
Subjt:  DEDDMFPPDMTYTERRQYKEVLRNSKK---TAHEEEEFRRSGLQQGQGS

RVW98215.1 hypothetical protein CK203_031882 [Vitis vinifera]1.6e-1559.02Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDL
        DP W YC+P++GNK+ T+CN+C LAIKSGGITRFK+HL+  D N NT+ CPN P E  +++
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDL

TrEMBL top hitse value%identityAlignment
A0A438DC97 BED-type domain-containing protein2.9e-1536.88Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYE-------------------------------------DLDF
        D +W YCSP++GN++ T+CNFC L +KSGGI+RFKYHLA  D N NT+ C + P E  E                                     D+D 
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYE-------------------------------------DLDF

Query:  NDDEDD-----MFPPDMTYTERRQYKEVLRNSKKTAHEEEE
        +DD+D+     M+P +M   ER  Y+EV+R SK T  E ++
Subjt:  NDDEDD-----MFPPDMTYTERRQYKEVLRNSKKTAHEEEE

A0A438F0E7 BED-type domain-containing protein2.9e-1533.33Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLE--------------------------------------------
        DP W YC+P++GNK+ T+CN+C LAIKSGGITRFK+HL+  D N NT+ CPN P E                                            
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLE--------------------------------------------

Query:  ----------------GYEDLDFNDDEDDMFPPDMTYTERRQYKEVLRNSKKT---AHEEEEFRRSGLQQGQGS
                        G +D D  DD+  M+P DM   ER  Y+EV++ SK T     +EE F +   + G+ S
Subjt:  ----------------GYEDLDFNDDEDDMFPPDMTYTERRQYKEVLRNSKKT---AHEEEEFRRSGLQQGQGS

A0A438F1U9 BED-type domain-containing protein3.1e-1737.58Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLE-----------------------------------GYEDLDFND
        DP W YC+P++GNK+ T+CN+C LAIKSGGITRFK+HL+  D N NT+ CPN P E                                   G +D D  D
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLE-----------------------------------GYEDLDFND

Query:  DEDDMFPPDMTYTERRQYKEVLRNSKK---TAHEEEEFRRSGLQQGQGS
        D+  M+P DM   ER  Y+E +R SK       ++E F +   + G+ S
Subjt:  DEDDMFPPDMTYTERRQYKEVLRNSKK---TAHEEEEFRRSGLQQGQGS

A0A438HNT1 BED-type domain-containing protein3.8e-1536.88Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYE-------------------------------------DLDF
        D +W YCSP++GN++ T+CNFC L +KSGGI+RFKYHLA  D N NT+ C + P E  E                                     D+D 
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYE-------------------------------------DLDF

Query:  NDDEDD-----MFPPDMTYTERRQYKEVLRNSKKTAHEEEE
        +DD+D+     M+P +M   ER  Y+EV+R SK T  E ++
Subjt:  NDDEDD-----MFPPDMTYTERRQYKEVLRNSKKTAHEEEE

A5BS83 BED-type domain-containing protein2.9e-1533.73Show/hide
Query:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLE--------------------------------------------
        DP W YC+P++GNK+ T+CN+C LAIKSGGITRFK+HL+  D N NT+ CPN P E                                            
Subjt:  DPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLE--------------------------------------------

Query:  -----------GYEDLDFNDDEDDMFPPDMTYTERRQYKEVLRNSKK---TAHEEEEFRRSGLQQGQGS
                   G +D D  DD+  M+P DM   ER  Y+E +R SK       +EE F +   + G+ S
Subjt:  -----------GYEDLDFNDDEDDMFPPDMTYTERRQYKEVLRNSKK---TAHEEEEFRRSGLQQGQGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17450.1 hAT dimerisation domain-containing protein7.1e-0640.3Show/hide
Query:  GRLDPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDLDFN
        G +DP W +    D  K    CN+C   I SGGI RFK HLA         PC  AP E Y  +  N
Subjt:  GRLDPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDLDFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGAGGACGCTTAGATCCTTCTTGGGCTTACTGTAGCCCAATTGACGGAAACAAATCTGACACTGTATGCAATTTTTGTCAGCTAGCGATTAAAAGTGGTGGCAT
CACTAGGTTCAAATATCATCTCGCTGGATATGATAAAAACAAAAACACTAGACCATGCCCCAACGCGCCTCTAGAAGGCTACGAAGATCTAGACTTCAACGATGACGAAG
ACGACATGTTCCCACCAGATATGACCTACACTGAGCGCAGACAGTACAAAGAAGTTCTGCGTAACTCGAAAAAAACTGCACATGAGGAGGAAGAATTTCGAAGGAGTGGG
CTTCAGCAAGGTCAGGGCTCAAGTAACTTTCAACGATCCAGTAGTATGAAGGAACTAGCATACGACAAGTCAGAAGGGGCTCGACAAAAAAAATATAAAAGACATGTTCA
AGAAGAAGAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACGAGGACGCTTAGATCCTTCTTGGGCTTACTGTAGCCCAATTGACGGAAACAAATCTGACACTGTATGCAATTTTTGTCAGCTAGCGATTAAAAGTGGTGGCAT
CACTAGGTTCAAATATCATCTCGCTGGATATGATAAAAACAAAAACACTAGACCATGCCCCAACGCGCCTCTAGAAGGCTACGAAGATCTAGACTTCAACGATGACGAAG
ACGACATGTTCCCACCAGATATGACCTACACTGAGCGCAGACAGTACAAAGAAGTTCTGCGTAACTCGAAAAAAACTGCACATGAGGAGGAAGAATTTCGAAGGAGTGGG
CTTCAGCAAGGTCAGGGCTCAAGTAACTTTCAACGATCCAGTAGTATGAAGGAACTAGCATACGACAAGTCAGAAGGGGCTCGACAAAAAAAATATAAAAGACATGTTCA
AGAAGAAGAATTTTGA
Protein sequenceShow/hide protein sequence
MERGRLDPSWAYCSPIDGNKSDTVCNFCQLAIKSGGITRFKYHLAGYDKNKNTRPCPNAPLEGYEDLDFNDDEDDMFPPDMTYTERRQYKEVLRNSKKTAHEEEEFRRSG
LQQGQGSSNFQRSSSMKELAYDKSEGARQKKYKRHVQEEEF