; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007583 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007583
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr9:1411482..1412937
RNA-Seq ExpressionLag0007583
SyntenyLag0007583
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS31826.1 hypothetical protein Acr_00g0019390 [Actinidia rufa]4.9e-1530.99Show/hide
Query:  ESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQ------GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKS
        E+++ A +++AK       TG    + D    Q      G +  +K+ G   +EELI++ D PFT  VM+  +P KFK+PT +P+DG KDP+ HL TYK+
Subjt:  ESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQ------GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKS

Query:  WMDFHDVSDAI-SPSIPCTVHGS------------------------------QRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAI
         MD   V D I   + P T+ GS                              QR  + S    N +    E+LR+++T FN E L V+   +  A+ A 
Subjt:  WMDFHDVSDAI-SPSIPCTVHGS------------------------------QRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAI

Query:  TAGLEDERLLNSI
         AG+   + L S+
Subjt:  TAGLEDERLLNSI

KAF7143504.1 hypothetical protein RHSIM_Rhsim05G0128200 [Rhododendron simsii]3.8e-1535.62Show/hide
Query:  LQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAI-SPSIPCTVHGSQRT----VQASHQPLNSQ
        LQ++ D   + +  L+ ++D PFT  VM   +P KFK+PTF+P+DG  DP+ HL TYK++M  H++SD I   + P T++G  R     +  +   LN +
Subjt:  LQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAI-SPSIPCTVHGSQRT----VQASHQPLNSQ

Query:  TAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSI
            E+LR Y+  FN+EAL V+   +   L     GL+  +   S+
Subjt:  TAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSI

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]3.2e-1432Show/hide
Query:  LVEEKR----RVAKTAESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQGDLQKLKDSGGQDMEELIDQV------DPPFTEEVMKAEVPQKFKVPTFKP
        +  EKR    R  ++     R++  +A+  H P   G++ T ++    +G+L    ++     E+  D +      +PPFT +V++A +P KFK PT KP
Subjt:  LVEEKR----RVAKTAESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQGDLQKLKDSGGQDMEELIDQV------DPPFTEEVMKAEVPQKFKVPTFKP

Query:  YDGKKDPIQHLNTYKSWMDFHDVSDAIS-PSIPCTVHGSQRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIG
        YDG KDP  ++  ++  MDF   SDAI   +    + GS R     ++ L ++   SE+LR+Y+TRF +E L+V   S+ +A+     GL DE L   +G
Subjt:  YDGKKDPIQHLNTYKSWMDFHDVSDAIS-PSIPCTVHGSQRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.4e-2332.4Show/hide
Query:  EGSLIRDPKKGKNPVEYMDESETESRGKKTNSATSKVRGLKHTKHTVLRSPESNTSCRTDLRNLVEEKRRVAKTAESEARAAEAEAKKDHLPWKTGLLNT
        E  L+RDPKKGK P     ES+TE   + TNS  SK+R               NT  RT + +  + K++    A +  ++   +   + +    G    
Subjt:  EGSLIRDPKKGKNPVEYMDESETESRGKKTNSATSKVRGLKHTKHTVLRSPESNTSCRTDLRNLVEEKRRVAKTAESEARAAEAEAKKDHLPWKTGLLNT

Query:  LKDLGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT----
         K    P+  + +      G D+EEL+DQ D PFTEE+M+ +VP KFK+PT K +D   DP+ HL+ Y+ WMD + VS+A+   +   T++GS R     
Subjt:  LKDLGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT----

Query:  ----------------------VQASHQP----LNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGAST
                               +   +P    L  +   +ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S G  T
Subjt:  ----------------------VQASHQP----LNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGAST

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]3.9e-2035.71Show/hide
Query:  LNTLKDLGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT-
        LN  K +  P+  + +  +   G D+EEL+ Q D PFTEE+M+ +VP KFK+PT KP+DG  +P+ HL+ Y+ WMD + VSDAI   +   T++GS R  
Subjt:  LNTLKDLGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT-

Query:  -------------------------VQASHQP----LNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERL
                                  +   +P    L  +   +ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE L
Subjt:  -------------------------VQASHQP----LNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERL

TrEMBL top hitse value%identityAlignment
A0A6J1D7D2 uncharacterized protein LOC1110183071.3e-1334.87Show/hide
Query:  EEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT--------------------------VQASHQP----LN
        EE+MK +VP KFK+PT K +DG  D + HL+ Y+ WMD + VS+A+   +   T+ GS R                            ++  +P    L 
Subjt:  EEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT--------------------------VQASHQP----LN

Query:  SQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGAST
         +  A+ESL DY+ RFN+E LQVEG +   +L+A  + + DE L  S G  T
Subjt:  SQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGAST

A0A6J1DWY0 uncharacterized protein LOC1110252934.1e-2332.4Show/hide
Query:  EGSLIRDPKKGKNPVEYMDESETESRGKKTNSATSKVRGLKHTKHTVLRSPESNTSCRTDLRNLVEEKRRVAKTAESEARAAEAEAKKDHLPWKTGLLNT
        E  L+RDPKKGK P     ES+TE   + TNS  SK+R               NT  RT + +  + K++    A +  ++   +   + +    G    
Subjt:  EGSLIRDPKKGKNPVEYMDESETESRGKKTNSATSKVRGLKHTKHTVLRSPESNTSCRTDLRNLVEEKRRVAKTAESEARAAEAEAKKDHLPWKTGLLNT

Query:  LKDLGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT----
         K    P+  + +      G D+EEL+DQ D PFTEE+M+ +VP KFK+PT K +D   DP+ HL+ Y+ WMD + VS+A+   +   T++GS R     
Subjt:  LKDLGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT----

Query:  ----------------------VQASHQP----LNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGAST
                               +   +P    L  +   +ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE L  S G  T
Subjt:  ----------------------VQASHQP----LNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIGAST

A0A6J1DXR9 uncharacterized protein LOC1110251091.5e-1432Show/hide
Query:  LVEEKR----RVAKTAESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQGDLQKLKDSGGQDMEELIDQV------DPPFTEEVMKAEVPQKFKVPTFKP
        +  EKR    R  ++     R++  +A+  H P   G++ T ++    +G+L    ++     E+  D +      +PPFT +V++A +P KFK PT KP
Subjt:  LVEEKR----RVAKTAESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQGDLQKLKDSGGQDMEELIDQV------DPPFTEEVMKAEVPQKFKVPTFKP

Query:  YDGKKDPIQHLNTYKSWMDFHDVSDAIS-PSIPCTVHGSQRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIG
        YDG KDP  ++  ++  MDF   SDAI   +    + GS R     ++ L ++   SE+LR+Y+TRF +E L+V   S+ +A+     GL DE L   +G
Subjt:  YDGKKDPIQHLNTYKSWMDFHDVSDAIS-PSIPCTVHGSQRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERLLNSIG

A0A6J1E1E7 uncharacterized protein LOC1110255481.9e-2035.71Show/hide
Query:  LNTLKDLGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT-
        LN  K +  P+  + +  +   G D+EEL+ Q D PFTEE+M+ +VP KFK+PT KP+DG  +P+ HL+ Y+ WMD + VSDAI   +   T++GS R  
Subjt:  LNTLKDLGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSI-PCTVHGSQRT-

Query:  -------------------------VQASHQP----LNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERL
                                  +   +P    L  +   +ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE L
Subjt:  -------------------------VQASHQP----LNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLEDERL

A0A7J0DBQ5 Retrotrans_gag domain-containing protein2.4e-1530.99Show/hide
Query:  ESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQ------GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKS
        E+++ A +++AK       TG    + D    Q      G +  +K+ G   +EELI++ D PFT  VM+  +P KFK+PT +P+DG KDP+ HL TYK+
Subjt:  ESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQ------GDLQKLKDSGGQDMEELIDQVDPPFTEEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKS

Query:  WMDFHDVSDAI-SPSIPCTVHGS------------------------------QRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAI
         MD   V D I   + P T+ GS                              QR  + S    N +    E+LR+++T FN E L V+   +  A+ A 
Subjt:  WMDFHDVSDAI-SPSIPCTVHGS------------------------------QRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAI

Query:  TAGLEDERLLNSI
         AG+   + L S+
Subjt:  TAGLEDERLLNSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAGAGGATGGAGAAGGGAAGCCGAAATCCAAACCCAGAAACTTCGAAAAGCAGTCGCAAGCTGCAGGCGTCACGAGACGATGACAGCATCCAGGGGTCACCGAG
ACAAGCAGGCCGAGGCCGAGGCCAAAGCCGAGCAGAGGATGTCGACACCAAAATTTCCGCCCTTGAGGATGATATGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCC
AAATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGAGCTTGATTAGAGACCCGAAGAAGGGGAAGAATCCAGTCGAGTACATGGATGAATCAGAGACAGAG
TCTAGAGGAAAGAAGACCAACAGCGCAACCAGCAAGGTCAGGGGGCTGAAGCACACAAAGCACACAGTACTGAGGAGCCCTGAGTCAAATACCAGCTGCAGAACAGACCT
GAGAAATCTAGTCGAGGAAAAGCGCAGAGTGGCCAAAACTGCCGAGTCTGAGGCCAGAGCTGCCGAGGCCGAGGCTAAGAAAGACCATCTCCCTTGGAAGACTGGGCTTC
TAAACACACTAAAGGATCTTGGAAATCCTCAGGGAGACCTGCAGAAGTTAAAGGATTCGGGAGGGCAAGACATGGAAGAACTAATCGACCAAGTCGACCCACCCTTCACA
GAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGCCGTATGATGGTAAGAAAGACCCAATCCAGCATCTAAATACCTACAAAAGCTGGAT
GGACTTCCACGACGTTTCAGATGCAATCAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACTGTGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAG
CCAGTGAGAGCTTACGTGATTACATAACGCGTTTTAATGACGAAGCGCTACAGGTTGAGGGGTACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGCCGGACTAGAAGAC
GAAAGACTGCTCAATTCAATAGGAGCAAGTACTGATGGAGATCTAAAATACGGGCCTCCTGAAATTCCCAGGGAGGATGAAGTCGAGTGCCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAAGAGGATGGAGAAGGGAAGCCGAAATCCAAACCCAGAAACTTCGAAAAGCAGTCGCAAGCTGCAGGCGTCACGAGACGATGACAGCATCCAGGGGTCACCGAG
ACAAGCAGGCCGAGGCCGAGGCCAAAGCCGAGCAGAGGATGTCGACACCAAAATTTCCGCCCTTGAGGATGATATGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCC
AAATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGAGCTTGATTAGAGACCCGAAGAAGGGGAAGAATCCAGTCGAGTACATGGATGAATCAGAGACAGAG
TCTAGAGGAAAGAAGACCAACAGCGCAACCAGCAAGGTCAGGGGGCTGAAGCACACAAAGCACACAGTACTGAGGAGCCCTGAGTCAAATACCAGCTGCAGAACAGACCT
GAGAAATCTAGTCGAGGAAAAGCGCAGAGTGGCCAAAACTGCCGAGTCTGAGGCCAGAGCTGCCGAGGCCGAGGCTAAGAAAGACCATCTCCCTTGGAAGACTGGGCTTC
TAAACACACTAAAGGATCTTGGAAATCCTCAGGGAGACCTGCAGAAGTTAAAGGATTCGGGAGGGCAAGACATGGAAGAACTAATCGACCAAGTCGACCCACCCTTCACA
GAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAAGCCGTATGATGGTAAGAAAGACCCAATCCAGCATCTAAATACCTACAAAAGCTGGAT
GGACTTCCACGACGTTTCAGATGCAATCAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACTGTGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAG
CCAGTGAGAGCTTACGTGATTACATAACGCGTTTTAATGACGAAGCGCTACAGGTTGAGGGGTACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGCCGGACTAGAAGAC
GAAAGACTGCTCAATTCAATAGGAGCAAGTACTGATGGAGATCTAAAATACGGGCCTCCTGAAATTCCCAGGGAGGATGAAGTCGAGTGCCGATAG
Protein sequenceShow/hide protein sequence
MSKRMEKGSRNPNPETSKSSRKLQASRDDDSIQGSPRQAGRGRGQSRAEDVDTKISALEDDMKGMNRSLSRILQILDKPDPSTKLHEGSLIRDPKKGKNPVEYMDESETE
SRGKKTNSATSKVRGLKHTKHTVLRSPESNTSCRTDLRNLVEEKRRVAKTAESEARAAEAEAKKDHLPWKTGLLNTLKDLGNPQGDLQKLKDSGGQDMEELIDQVDPPFT
EEVMKAEVPQKFKVPTFKPYDGKKDPIQHLNTYKSWMDFHDVSDAISPSIPCTVHGSQRTVQASHQPLNSQTAASESLRDYITRFNDEALQVEGYSEGAALVAITAGLED
ERLLNSIGASTDGDLKYGPPEIPREDEVECR