CuGenDBv2

Gene ID	Lag0007599
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Rep_fac-A_C domain-containing protein
Genome location	chr9:1657570..1658755
RNA-Seq Expression	Lag0007599
Synteny	Lag0007599
Gene Ontology terms	NA
InterPro domains	IPR012340 - Nucleic acid-binding, OB-fold IPR013955 - Replication factor A, C-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KGN46888.2 hypothetical protein Csa_020864 [Cucumis sativus]

5.3e-71

84.71

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPSSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKLH
        M N +PITTMCAV+AMD+T FCYR CSICERTLP NPSSLC+FCNFNAFNPGSSSSKR+FRLL+SIATDKKVQTVICFDR ARVLFGCSADEFF+FAKLH
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPSSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKLH

Query:  PFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYGAD
        PFAAETV+EILEGEM R+TISKPKNGNAQH RVVQ+VP+SS FQPAI+RL ELYG +
Subjt:  PFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYGAD

XP_022140388.1 uncharacterized protein LOC111011075 [Momordica charantia]

8.1e-72

87.18

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNP-SSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL
        M N +PITTMC V+AMDH+ FCYR CSICER+LPDNP SSLC+FCNFNAFNPG SSSKRLFRLL+SIATDKKVQTVICFDRAARVLFGCSADEFF+FAKL
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNP-SSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL

Query:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        HPFAAET +EILEGEMFRMTISKPKNGNAQH RVVQVVP+SSGFQPAI+RL ELYG
Subjt:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

XP_022943427.1 uncharacterized protein LOC111448196 isoform X1 [Cucurbita moschata]

1.4e-71

87.18

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL
        M N +PITTMCAVIAMDHT FCYR CSICERTLP NP  SLC+FCNFNAFNPGSSSSKR+FR+L+SIATDKKVQTVICFDR ARVLFGCSADEFF+FAKL
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL

Query:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        HPFAAE V+EILEGEMFRMTISKPKNGNAQH RVVQ+VP+SSGFQPAILRL ELYG
Subjt:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

XP_022943430.1 uncharacterized protein LOC111448196 isoform X2 [Cucurbita moschata]

1.4e-71

87.18

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL
        M N +PITTMCAVIAMDHT FCYR CSICERTLP NP  SLC+FCNFNAFNPGSSSSKR+FR+L+SIATDKKVQTVICFDR ARVLFGCSADEFF+FAKL
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL

Query:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        HPFAAE V+EILEGEMFRMTISKPKNGNAQH RVVQ+VP+SSGFQPAILRL ELYG
Subjt:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

XP_038901726.1 uncharacterized protein LOC120088466 [Benincasa hispida]

1.8e-71

87.18

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNP-SSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL
        M N +PITTMCAVIAMDHT FCYR CSICERTLPDNP SS+C+FCNFNAFNP  SSSKR+FRLL+SIATD+KVQTVICFDRAARVLFGCSADEFF+FAKL
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNP-SSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL

Query:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        HPFAAETV+EILEGEMFR+TISKPKNGNAQH RVVQVVP+SSGFQPAI RL ELYG
Subjt:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEN7 Uncharacterized protein

4.3e-71

85.81

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPSSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKLH
        M N +PITTMCAV+AMD+T FCYR CSICERTLP NPSSLC+FCNFNAFNPGSSSSKR+FRLL+SIATDKKVQTVICFDR ARVLFGCSADEFF+FAKLH
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPSSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKLH

Query:  PFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        PFAAETV+EILEGEM R+TISKPKNGNAQH RVVQ+VP+SS FQPAI+RL ELYG
Subjt:  PFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

A0A6J1CHW5 uncharacterized protein LOC111011075

3.9e-72

87.18

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNP-SSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL
        M N +PITTMC V+AMDH+ FCYR CSICER+LPDNP SSLC+FCNFNAFNPG SSSKRLFRLL+SIATDKKVQTVICFDRAARVLFGCSADEFF+FAKL
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNP-SSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL

Query:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        HPFAAET +EILEGEMFRMTISKPKNGNAQH RVVQVVP+SSGFQPAI+RL ELYG
Subjt:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

A0A6J1FWW9 uncharacterized protein LOC111448196 isoform X1

6.7e-72

87.18

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL
        M N +PITTMCAVIAMDHT FCYR CSICERTLP NP  SLC+FCNFNAFNPGSSSSKR+FR+L+SIATDKKVQTVICFDR ARVLFGCSADEFF+FAKL
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL

Query:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        HPFAAE V+EILEGEMFRMTISKPKNGNAQH RVVQ+VP+SSGFQPAILRL ELYG
Subjt:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

A0A6J1FXT2 uncharacterized protein LOC111448196 isoform X2

6.7e-72

87.18

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL
        M N +PITTMCAVIAMDHT FCYR CSICERTLP NP  SLC+FCNFNAFNPGSSSSKR+FR+L+SIATDKKVQTVICFDR ARVLFGCSADEFF+FAKL
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL

Query:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        HPFAAE V+EILEGEMFRMTISKPKNGNAQH RVVQ+VP+SSGFQPAILRL ELYG
Subjt:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

A0A6J1J8M2 uncharacterized protein LOC111483608 isoform X3

7.4e-71

86.54

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Query:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL
        M N + ITTMCAVIAMDHT FCYR CSICERTLP NP  SLC+FCNFNAFNPGSSSSKR+FR+L+SIATDKKVQTVICFDR ARVLFGCSADEFF+FAKL
Subjt:  MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPS-SLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKL

Query:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG
        HPFAAE V+EILEGEMFRMTISKPKNGNAQH RVVQ+VP+SSGFQPAILRL ELYG
Subjt:  HPFAAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G28105.1 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Replication factor A, C-terminal (InterPro:IPR013955); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

1.4e-42

55.63

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Query:  TTMCAVIAMDHTKFCYRACSICERTLP-DN----PSSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKLHPF
        T +C ++A+D T +CYR CS C+R LP DN     SS C+FC        S   K L+R+L+SIATD  V+TVICFDRAA VLFGCSADEFF+F KL+P 
Subjt:  TTMCAVIAMDHTKFCYRACSICERTLP-DN----PSSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKLHPF

Query:  AAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGEL
        AA  VN++ +GEM RMT+++P+N NAQH+RV  VVP+ SG QPAI+ L ++
Subjt:  AAETVNEILEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGEL

Sequences

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CDS sequence

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ATGGCAAATGTTCAGCCAATAACAACCATGTGCGCAGTGATAGCCATGGATCACACCAAGTTCTGTTATAGGGCTTGTTCTATCTGTGAGAGGACTCTCCCTGATAACCC
CTCTTCTCTCTGCAGATTCTGCAACTTCAACGCCTTCAATCCCGGATCCTCCTCCTCCAAACGCCTCTTTCGTCTCCTTTTGTCAATTGCAACGGATAAGAAAGTACAAA
CTGTTATATGCTTTGATAGGGCTGCTAGGGTTCTGTTTGGTTGCTCTGCTGATGAGTTTTTCAACTTTGCTAAGCTACATCCTTTTGCCGCTGAAACTGTAAATGAAATT
TTGGAGGGAGAGATGTTTAGAATGACGATCTCTAAACCCAAGAATGGCAATGCACAACACTTGAGAGTTGTACAAGTTGTTCCTATGAGTTCAGGATTTCAACCAGCAAT
TCTGAGACTGGGGGAATTGTATGGGGCAGATATGAGGCTCCACATTCATTTAGCTGAACTTTCATGGATAAATCTAATTGATTTTGATTAG

mRNA sequence

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Protein sequence

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MANVQPITTMCAVIAMDHTKFCYRACSICERTLPDNPSSLCRFCNFNAFNPGSSSSKRLFRLLLSIATDKKVQTVICFDRAARVLFGCSADEFFNFAKLHPFAAETVNEI
LEGEMFRMTISKPKNGNAQHLRVVQVVPMSSGFQPAILRLGELYGADMRLHIHLAELSWINLIDFD

Lag0007599 (gene) of Sponge gourd (AG-4) v1 genome