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Lag0007615 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007615
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr9:2001432..2001740
RNA-Seq ExpressionLag0007615
SyntenyLag0007615
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4361328.1 hypothetical protein G4B88_015920 [Cannabis sativa]1.3e-0847.46Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI
        + LPSK+++FVWK +HN+IP    L   H+     CPLC++  ET  HALF C RA E+
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI

KAF4368669.1 hypothetical protein F8388_003370 [Cannabis sativa]1.3e-0847.46Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI
        + LPSK+++FVWK +HN+IP    L   H+     CPLC++  ET  HALF C RA E+
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI

TXG53596.1 hypothetical protein EZV62_018852 [Acer yangbiense]9.6e-0936.27Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQDVECICVGVW
        + +P K+++F+WK+YH  + T+VNL  H VP    C +C K  ETT HAL+ CG               RNSCY   +  W      Q+ D  C C  V 
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQDVECICVGVW

Query:  AI
        +I
Subjt:  AI

XP_030508858.1 uncharacterized protein LOC115723499 [Cannabis sativa]1.3e-0847.46Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI
        + LPSK+++FVWK +HN+IP    L   H+     CPLC++  ET  HALF C RA E+
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]7.4e-0933.65Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQ--DVECICVG
        + LPSK+++F W++YH ++PT   L+  H+     CPLCQ  +ET +HA F C RA ++ +     +    S      D +L  V+ Q+Q   VE     
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQ--DVECICVG

Query:  VWAI
        +W I
Subjt:  VWAI

TrEMBL top hitse value%identityAlignment
A0A5C7HBR6 zf-RVT domain-containing protein4.7e-0936.27Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQDVECICVGVW
        + +P K+++F+WK+YH  + T+VNL  H VP    C +C K  ETT HAL+ CG               RNSCY   +  W      Q+ D  C C  V 
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQDVECICVGVW

Query:  AI
        +I
Subjt:  AI

A0A7J6ESF6 zf-RVT domain-containing protein6.1e-0947.46Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI
        + LPSK+++FVWK +HN+IP    L   H+     CPLC++  ET  HALF C RA E+
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI

A0A7J6FFK9 zf-RVT domain-containing protein6.1e-0947.46Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI
        + LPSK+++FVWK +HN+IP    L   H+     CPLC++  ET  HALF C RA E+
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI

A0A803NJJ8 Uncharacterized protein6.1e-0947.46Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI
        + LPSK+++FVWK +HN+IP    L   H+     CPLC++  ET  HALF C RA E+
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEI

A0A803Q6Z2 Uncharacterized protein3.6e-0933.65Show/hide
Query:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQ--DVECICVG
        + LPSK+++F W++YH ++PT   L+  H+     CPLCQ  +ET +HA F C RA ++ +     +    S      D +L  V+ Q+Q   VE     
Subjt:  MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQ--DVECICVG

Query:  VWAI
        +W I
Subjt:  VWAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTTCCTAGCAAAATGAAGGTTTTCGTATGGAAATCTTATCATAACTCTATTCCAACCATGGTCAATCTCCGAAATCATCATGTCCCGTTTTTCGTAACTTGTCC
ATTATGCCAAAAGGATATGGAGACCACAGATCATGCACTGTTTCGGTGTGGTAGGGCAAGTGAGATTTGTGAACAGTTGTTTCCTAGGATGCCTGGGAGAAATTCATGCT
ACACGGACATTAAAGATCGGTGGTTGGAGTTGGTTGCTGGCCAGATGCAGGATGTAGAGTGTATTTGTGTGGGTGTCTGGGCTATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTTCCTAGCAAAATGAAGGTTTTCGTATGGAAATCTTATCATAACTCTATTCCAACCATGGTCAATCTCCGAAATCATCATGTCCCGTTTTTCGTAACTTGTCC
ATTATGCCAAAAGGATATGGAGACCACAGATCATGCACTGTTTCGGTGTGGTAGGGCAAGTGAGATTTGTGAACAGTTGTTTCCTAGGATGCCTGGGAGAAATTCATGCT
ACACGGACATTAAAGATCGGTGGTTGGAGTTGGTTGCTGGCCAGATGCAGGATGTAGAGTGTATTTGTGTGGGTGTCTGGGCTATCTAG
Protein sequenceShow/hide protein sequence
MSLPSKMKVFVWKSYHNSIPTMVNLRNHHVPFFVTCPLCQKDMETTDHALFRCGRASEICEQLFPRMPGRNSCYTDIKDRWLELVAGQMQDVECICVGVWAI