CuGenDBv2

Gene ID	Lag0007618
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr9:2035798..2038054
RNA-Seq Expression	Lag0007618
Synteny	Lag0007618
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR026960 - Reverse transcriptase zinc-binding domain IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

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GenBank top hits

e value

%identity

Alignment

CAB4273082.1 unnamed protein product [Prunus armeniaca]

4.8e-114

34.38

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Query:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK
        + S++ F R      + Q+  +LG++ +   GKYLGLN + G SKR  F  V + +  +L GW EQYLS AGKEVL+KAVA+A+P Y+M+CFKLP+++CK
Subjt:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK

Query:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE
        +I   +A FWW+ +K ++GIHW +W+ L + K+ GG+  +DL  FNLA+LAK GWR+L  P SLLAR+   +Y     F  A      SWGW+ I+ GR 
Subjt:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE

Query:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
        IL+ G RWR+G    + I +D WL  P       R   +  +V EL+ +    WD   V  C  P +A  +  IP+ R    D+ VWHYT+ G Y+VRSG
Subjt:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAEG--------GEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y  A+ +           GE+S     R +W  IW L   PK+R F+W+ CRN LAV  NL  RG+ V+  C +C +E E+  HV  +C+ AR  WF SP
Subjt:  YQSAIMVAEG--------GEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEF----------MGTMERRGREERDRVE
        +QLD       +F   W  + +  ++ +   + L + +FGLW+ WK RN  VFE   ++    +    +++ EF          +  + R    + + V 
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEF----------MGTMERRGREERDRVE

Query:  PAKGPYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVD
          + P  G   V  +  DAAW   +   G+GW +   DG       +   R  + L  E  A+   L      G  ++ V S   +++ ++ G  +  + 
Subjt:  PAKGPYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVD

Query:  FEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKY
         + I   I  +   F  C   +  R  N  AH +A +
Subjt:  FEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKY

CAB4274760.1 unnamed protein product [Prunus armeniaca]

3.6e-125

36.23

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Query:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK
        + S++ +S +     R Q+ ++L ++G    GKYLG+  + G SKR+ F  V R +DG+L GW EQ+LS AGKEVL+KAVA+A+P YTM+CFKLP+ +CK
Subjt:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK

Query:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE
        +I + +A+FWW++   K GIHW +W  LS+ K+ GGL  +DL  FN+ALLAK GWR+L  P SLLA +   +Y    SF  A  + ++SWGW+ I+ GR 
Subjt:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE

Query:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
        +L+ G RWR+G  + +++  DPWLP P TF+ + R   L  +V EL+    + W +  V  C +PE+A  +L IP+ R    D+ +WH+   G Y+VRSG
Subjt:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAE--------GGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y+ A+ +           GEAS  S+  ++W  +W++   PK++ FIW  C N LAV  NL +R +   G CG C  ++ET  H+  ECD ARAFWF SP
Subjt:  YQSAIMVAE--------GGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAK--GPYSG
        LQLD+      +F  +W  +   L+  + + E +  F FGLW+ WK RN  VF+    D    + ++ +++ EF          +   ++PA    P S 
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAK--GPYSG

Query:  LGPVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIW
          P   L     DAAW    +  G+GW +    G       +      + +  E  A+ H L         ++ V S  ++ + ++NGR +   D E I 
Subjt:  LGPVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIW

Query:  QKIGLMCESFNSCQIDFIRREHNGNAHCLAKY
          I  +  S +     F  R  N  AH +A +
Subjt:  QKIGLMCESFNSCQIDFIRREHNGNAHCLAKY

CAB4303756.1 unnamed protein product [Prunus armeniaca]

1.7e-122

35.56

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Query:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK
        + S++ +S +     R Q+ ++L ++G    GKYLG+  + G SKR+ F  V R +D +L GW EQ+LS AGKEVL+KAVA+A+P YTM+ FKLP+ +CK
Subjt:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK

Query:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE
        +I + +A+FWW++   K  IHW +W  LS+ K+ GGL  +DL  FN+ LLAK GWR+L  P SLLA +   +Y    SF  A  + ++SWGW+ I+ GR 
Subjt:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE

Query:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
        +L+ G RWR+G  + +++  DPWLP P TF+ + R   L ++V EL+    + W +  +  C +PE+A  +L IP+ R    D+ +WH++  G Y+VRSG
Subjt:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAE--------GGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y+ A+ +           GEAS  S+  ++W  +W++   PK++ FIWR C N LAV  NL +R +   G CG C  ++ET  H+  ECD ARAFWF SP
Subjt:  YQSAIMVAE--------GGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAKGPYSGLG
        LQLD+      +F  +W  +   L+  + + E +  F FGLW+ WK RN  VF+    D    + ++ +++ EF  T ++  + +  +   +  P S   
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAKGPYSGLG

Query:  PVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQK
        P   L     DAAW    +  G+GW +    G       +      + +  E  A+ H L         ++ V S  ++ + ++NGR +   D E I   
Subjt:  PVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQK

Query:  IGLMCESFNSCQIDFIRREHNGNAHCLAKY
        I  +  S +     F  R  N  AH +A +
Subjt:  IGLMCESFNSCQIDFIRREHNGNAHCLAKY

XP_028948114.1 uncharacterized protein LOC114820933 [Malus domestica]

1.0e-119

36.21

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Query:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK
        + S+ +F     +  + +I E LGI    G GKYLGL  + G+SK+  FA V   ++ RL+GW EQ+LS AGKEVL+KAVA+ALP Y M+CFKLP+ VC+
Subjt:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK

Query:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE
         +   +  +WW+    KKG+HW +W  L +HK+ GGL  KD+  FNLA LAK GWR++  P SLLA +   +Y    +F EAG   N SWGW+ I   R 
Subjt:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE

Query:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
        +L+ G RWRVG  +KI I +DPW P+P TF    R     T+V +L+      W    +      ED   +L IPL +    DR VWH+T  G YSV++G
Subjt:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAEGGEASDRSA--------TRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y  A+ + E G    +          T  +W  IWNL    K++ FIWR C N  AV  NL +R +R+D +CGVC   +E+ NH+   CD +   WF SP
Subjt:  YQSAIMVAEGGEASDRSA--------TRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAKG------
        L L+       +F  SW      +   + +   +  F+FGLW+ WK RN +VF+  H      + V  + +GE+   M   G  +   V P K       
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAKG------

Query:  ----PYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNC-LHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPV
            P  G      L  DA+W   S   G GW +    G         G+   +C   AE +A+  GL++    GF  V V +  K ++ ++N   +   
Subjt:  ----PYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNC-LHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPV

Query:  DFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKY
         FE I   I ++     S    F+ RE N  AH +AK+
Subjt:  DFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKY

XP_028962235.1 uncharacterized protein LOC114826307 [Malus domestica]

2.0e-115

35.89

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Query:  SNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCKKI
        S+V FS       + +I   LGIQ   G GKYLGL  + G SK+  FA V   V+ RL+GW EQ+LSQAGKEVL+K+VA+ALP Y M+CFKLP+ VC+ I
Subjt:  SNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCKKI

Query:  NSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGREIL
           + KFWW+  + + GIHW +W+ +SK K  GGL  KD+  FNLA+LAK GWRL   P SLLA +   +Y    SF +AG     SWGW+ I   R++L
Subjt:  NSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGREIL

Query:  KMGFRWRVGARSKIRIWEDPWLPRPITFK--PIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
          G RWRVG    I I +DPW P+P +F+  P   L +  T+V +L+      W    + +    EDAD +L IPL     +DR +W ++ +G YSV+SG
Subjt:  KMGFRWRVGARSKIRIWEDPWLPRPITFK--PIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAEG--------GEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y  A+ + E         G  S+    + +W+ IW+L    K++ FIWR C N LAV  N+ +R +RVD +CGVC   +ET NH+   C  + +FWF SP
Subjt:  YQSAIMVAEG--------GEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDR-VEPAKG-----
        L L+       +F  SWG+  E L  +  + E    F+FGLW+ WK RN  VF+  +    + + +  + + EF       G +  +  V P        
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDR-VEPAKG-----

Query:  -----PYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPV
             P  G      +  DAAW + +L  G+GW      G  +         C++   AE  A+ + L+      F+ V + S  K ++ ++    +   
Subjt:  -----PYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPV

Query:  DFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKY
        + + +   I ++ +   S    F+ RE N  AH +AK+
Subjt:  DFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKY

TrEMBL top hits

e value

%identity

Alignment

A0A4Y1R838 Ribonuclease H-like superfamily protein

1.6e-107

36.97

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Query:  AGKEVLLKAVALALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYA
        AGKEVL+K VA+A+P + M+CFKLP+++C++I S +A+FWW+T K +K IHW  WK LS  K+ GG+  +DL  FNLA+LAK GWR+L +P+SLL ++  
Subjt:  AGKEVLLKAVALALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYA

Query:  ARYLGRVSFWEAGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADM
         +Y   V F +A +    SWGWR I+ GR IL  G RWRVG   +IR+ EDPWLP+P TFK   R   L  +V EL+    + W    +     P +  +
Subjt:  ARYLGRVSFWEAGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADM

Query:  VLEIPLCRGLDDDRAVWHYTNSGEYSVRSGYQSAIMVAEG--------GEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDG
        +  +P+ R    DR VWH+   G Y+VRSGY+ A+ +           GE S +    ++W  IW L   PK+R FIW+ACRN LAV  NL  R + VD 
Subjt:  VLEIPLCRGLDDDRAVWHYTNSGEYSVRSGYQSAIMVAEG--------GEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDG

Query:  ICGVCKRENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEE
         C  C  E+ET  H+   CD ARA WF SPLQ D+      +F   W  +RE+ D      E L L +F LW+ WK RN++VF    +   + + ++  +
Subjt:  ICGVCKRENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEE

Query:  MGEF------MGTMERRGREERDRVEPAKGPYSGLGP-VAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMR
        + EF           ++     D V  A   +S   P +  L  D AW   +   G+GW L    G           RC + L AE  A+   L W    
Subjt:  MGEF------MGTMERRGREERDRVEPAKGPYSGLGP-VAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMR

Query:  GFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKYGLCI
        GFD+VAV S    L+ ++N  +   ++ E I   +  +    +  +  +  R+ N  AH +A Y   I
Subjt:  GFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKYGLCI

A0A6J5U034 Reverse transcriptase domain-containing protein

7.8e-102

39.78

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Query:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK
        + S+++F +      R Q+ E+L +Q   G G+YLGL+ + G SK+  F  V   ++ +L GW EQYLSQAGKEVL+KAVA+A+P Y M+CF+LP+N+CK
Subjt:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK

Query:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE
        +I   + ++WW+  K  KGIHW  W+ LS  K  GG+  +DL  FNLA+LAK GWR++  P+SLLA  Y  +Y     F  AG     SWGW+ I+ GR+
Subjt:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE

Query:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
        IL+   RWR       R W       P           +  LV+ L+ +  + W+   +  C    +A  +L +PL R   DDR VWH+T  G YSVR+G
Subjt:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAEGGEASDRSA--------TRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y+ A+ + + GE   ++             W  IW L   PK+R F+WR+CRN LAV  NL +R + VD  C +C  E E+  H+   C+ AR FWFGS 
Subjt:  YQSAIMVAEGGEASDRSA--------TRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIG
        +QLD        F+  W  + +  +K   S+E L +  FGLW+ WK RNS VFE   MD    +G
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIG

A0A6J5UAY2 Reverse transcriptase domain-containing protein

2.3e-114

34.38

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Query:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK
        + S++ F R      + Q+  +LG++ +   GKYLGLN + G SKR  F  V + +  +L GW EQYLS AGKEVL+KAVA+A+P Y+M+CFKLP+++CK
Subjt:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK

Query:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE
        +I   +A FWW+ +K ++GIHW +W+ L + K+ GG+  +DL  FNLA+LAK GWR+L  P SLLAR+   +Y     F  A      SWGW+ I+ GR 
Subjt:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE

Query:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
        IL+ G RWR+G    + I +D WL  P       R   +  +V EL+ +    WD   V  C  P +A  +  IP+ R    D+ VWHYT+ G Y+VRSG
Subjt:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAEG--------GEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y  A+ +           GE+S     R +W  IW L   PK+R F+W+ CRN LAV  NL  RG+ V+  C +C +E E+  HV  +C+ AR  WF SP
Subjt:  YQSAIMVAEG--------GEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEF----------MGTMERRGREERDRVE
        +QLD       +F   W  + +  ++ +   + L + +FGLW+ WK RN  VFE   ++    +    +++ EF          +  + R    + + V 
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEF----------MGTMERRGREERDRVE

Query:  PAKGPYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVD
          + P  G   V  +  DAAW   +   G+GW +   DG       +   R  + L  E  A+   L      G  ++ V S   +++ ++ G  +  + 
Subjt:  PAKGPYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVD

Query:  FEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKY
         + I   I  +   F  C   +  R  N  AH +A +
Subjt:  FEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKY

A0A6J5UE59 Reverse transcriptase domain-containing protein

1.7e-125

36.23

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Query:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK
        + S++ +S +     R Q+ ++L ++G    GKYLG+  + G SKR+ F  V R +DG+L GW EQ+LS AGKEVL+KAVA+A+P YTM+CFKLP+ +CK
Subjt:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK

Query:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE
        +I + +A+FWW++   K GIHW +W  LS+ K+ GGL  +DL  FN+ALLAK GWR+L  P SLLA +   +Y    SF  A  + ++SWGW+ I+ GR 
Subjt:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE

Query:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
        +L+ G RWR+G  + +++  DPWLP P TF+ + R   L  +V EL+    + W +  V  C +PE+A  +L IP+ R    D+ +WH+   G Y+VRSG
Subjt:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAE--------GGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y+ A+ +           GEAS  S+  ++W  +W++   PK++ FIW  C N LAV  NL +R +   G CG C  ++ET  H+  ECD ARAFWF SP
Subjt:  YQSAIMVAE--------GGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAK--GPYSG
        LQLD+      +F  +W  +   L+  + + E +  F FGLW+ WK RN  VF+    D    + ++ +++ EF          +   ++PA    P S 
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAK--GPYSG

Query:  LGPVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIW
          P   L     DAAW    +  G+GW +    G       +      + +  E  A+ H L         ++ V S  ++ + ++NGR +   D E I 
Subjt:  LGPVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIW

Query:  QKIGLMCESFNSCQIDFIRREHNGNAHCLAKY
          I  +  S +     F  R  N  AH +A +
Subjt:  QKIGLMCESFNSCQIDFIRREHNGNAHCLAKY

A0A6J5WPU6 Reverse transcriptase domain-containing protein

8.0e-123

35.56

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Query:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK
        + S++ +S +     R Q+ ++L ++G    GKYLG+  + G SKR+ F  V R +D +L GW EQ+LS AGKEVL+KAVA+A+P YTM+ FKLP+ +CK
Subjt:  EMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCK

Query:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE
        +I + +A+FWW++   K  IHW +W  LS+ K+ GGL  +DL  FN+ LLAK GWR+L  P SLLA +   +Y    SF  A  + ++SWGW+ I+ GR 
Subjt:  KINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGRE

Query:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG
        +L+ G RWR+G  + +++  DPWLP P TF+ + R   L ++V EL+    + W +  +  C +PE+A  +L IP+ R    D+ +WH++  G Y+VRSG
Subjt:  ILKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSG

Query:  YQSAIMVAE--------GGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP
        Y+ A+ +           GEAS  S+  ++W  +W++   PK++ FIWR C N LAV  NL +R +   G CG C  ++ET  H+  ECD ARAFWF SP
Subjt:  YQSAIMVAE--------GGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSP

Query:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAKGPYSGLG
        LQLD+      +F  +W  +   L+  + + E +  F FGLW+ WK RN  VF+    D    + ++ +++ EF  T ++  + +  +   +  P S   
Subjt:  LQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAKGPYSGLG

Query:  PVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQK
        P   L     DAAW    +  G+GW +    G       +      + +  E  A+ H L         ++ V S  ++ + ++NGR +   D E I   
Subjt:  PVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQK

Query:  IGLMCESFNSCQIDFIRREHNGNAHCLAKY
        I  +  S +     F  R  N  AH +A +
Subjt:  IGLMCESFNSCQIDFIRREHNGNAHCLAKY

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

9.7e-41

28.67

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Query:  RETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSF
        ++TF  ++  V  R+SGW E+ LS AG+  L KAV  ++P+++M+   LP ++  +++     F W +   KK  H   W  +   K+ GGL ++   S 
Subjt:  RETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSF

Query:  NLALLAKQGWRLLTRPESLLARIYAARY-LGRV--SFWEAGVKGNASWGWRSIMAG-REILKMGFRWRVGARSKIRIWEDPWLP-RPITFKPIG-RLGSL
        N AL++K GWRLL    SL   +   +Y +G +  S W    KG+ S  WRSI  G R+++  G  W  G   +IR W D W+  +P+     G R    
Subjt:  NLALLAKQGWRLLTRPESLLARIYAARY-LGRV--SFWEAGVKGNASWGWRSIMAG-REILKMGFRWRVGARSKIRIWEDPWLP-RPITFKPIG-RLGSL

Query:  WTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLE---IPLCRGLDDDRAVWHYTNSGEYSVRSGYQSAIMVAEGGEASDRSATRNLWNEIWNLPCTPKVR
         T+V + +  PG GWD  ++       +  + L    + L  G   DR  W ++  G++SVRS Y+   +     +   R    + +N +W +    +V+
Subjt:  WTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLE---IPLCRGLDDDRAVWHYTNSGEYSVRSGYQSAIMVAEGGEASDRSATRNLWNEIWNLPCTPKVR

Query:  NFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREWLDKEDPSREGL------SLFS
         F+W      +       +R L    +C VCK   E++ HVL +C      W     Q    GF    F+ S   + EWL      R G       ++F+
Subjt:  NFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREWLDKEDPSREGL------SLFS

Query:  FGLWKQWKRRNSIVF
          +W  WK R   +F
Subjt:  FGLWKQWKRRNSIVF

P93295 Uncharacterized mitochondrial protein AtMg00310

2.7e-27

39.87

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Query:  LALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKR-CGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFW
        +ALP+Y M+CF+L   +CKK+ S + +FWW + + K+ I W AW+ L K K   GGL  +DL  FN ALLAKQ +R++ +P +LL+R+  +RY    S  
Subjt:  LALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKR-CGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFW

Query:  EAGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWLPRPITFKPI
        E  V    S+ WRSI+ GRE+L  G    +G     ++W D W+       P+
Subjt:  EAGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWLPRPITFKPI

Arabidopsis top hits

e value

%identity

Alignment

AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)

2.5e-07

31.03

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Query:  RIWEDPWLPRPIT--FKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSGY
        R+W+DPW+P  +    K I  +      V +L+ +    W   R+++ + P D  ++L I   R    D   W +T SG Y+V+SGY
Subjt:  RIWEDPWLPRPIT--FKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSGY

AT3G09510.1 Ribonuclease H-like superfamily protein

4.5e-49

28.82

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Query:  ARYLGRVSFWEAGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWL----PRPI----TFKPIGRLGSLWTLVRELMSEPGE--GWDEGRVR
        ARY   VS  +A V+   S+GW S++ G  +LK G R  +G    IRI  D  +    PRP+    T+K +         +  L    G    WD+ ++ 
Subjt:  ARYLGRVSFWEAGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWL----PRPI----TFKPIGRLGSLWTLVRELMSEPGE--GWDEGRVR

Query:  SCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSGYQSAIMVAEGG--EASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGL
          +   D   +  I L +    D+ +W+Y  +GEY+VRSGY              +    + +L   IWNLP  PK+++F+WRA    LA    L  RG+
Subjt:  SCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSGYQSAIMVAEGG--EASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGL

Query:  RVDGICGVCKRENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGV
        R+D  C  C RENE+INH L  C  A   W  S   L        +F  +   I  ++     S     L  + +W+ WK RN++VF          +  
Subjt:  RVDGICGVCKRENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREWLDKEDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGV

Query:  VCEEMGEFMGTMERRGREERDRVEPAKGPYSGLGPVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMR
           E  +++   +   +      + A+       P A       DA ++   L    GW +    G      + K +   N L AE  ALL  L+ T +R
Subjt:  VCEEMGEFMGTMERRGREERDRVEPAKGPYSGLGPVAMLF---VDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMR

Query:  GFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKYG
        G+ +V +   C+ L+N++NG  S         + I      F S Q  FIRR+ N  AH LAKYG
Subjt:  GFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKYG

AT3G25270.1 Ribonuclease H-like superfamily protein

1.5e-17

22.4

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Query:  EIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSPL---QLDMGGF---RRLNFACSWGRIREWLDK
        +IW L   PK+++F+W+     LA   NL +R +R    C  C +E+ET  H+  +C  A+  W  S +   +L   G     ++    S       L  
Subjt:  EIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSPL---QLDMGGF---RRLNFACSWGRIREWLDK

Query:  EDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVV------CEEMGEFMGTMERRGREERDRVEPAKGPYSGLGPVAMLF---VDAAWERVSLN
          P    L+++   LW+ WK RN +VF+   +  +N +          E+   ++ ++ ++    R + +P         P +       D A+   + N
Subjt:  EDPSREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVV------CEEMGEFMGTMERRGREERDRVEPAKGPYSGLGPVAMLF---VDAAWERVSLN

Query:  TGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPI-----WQKIGLMCESFNSCQIDF
           GW +  ++G         GS   + L +E  AL+  ++    +G+ +V      K++  ++N  +     F  I     WQK       F      +
Subjt:  TGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPI-----WQKIGLMCESFNSCQIDF

Query:  IRREHNGNAHCLAKYGL
        + R +N  A  LAK+ L
Subjt:  IRREHNGNAHCLAKYGL

AT4G29090.1 Ribonuclease H-like superfamily protein

1.7e-69

30.67

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Query:  LALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWE
        +ALP YTM CF LP  VCK+I S LA FWW+ K+  KG+HW AW  LS +K  GG+  KD+ +FNLALL KQ WR+L+RPESL+A+++ +RY  +     
Subjt:  LALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWE

Query:  AGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWL---PRPITFK----PIGRLGSLWTL--VRELMSEPGEGWDEGRVRSCLLPEDADMVL
        A +    S+ W+SI A +EIL+ G R  VG    I IW   WL   P     +    P     S+ ++  V +L+ E G  W +  +       +  ++ 
Subjt:  AGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWL---PRPITFK----PIGRLGSLWTL--VRELMSEPGEGWDEGRVRSCLLPEDADMVL

Query:  EIPLCRGLDDDRAVWHYTNSGEYSVRSGY---QSAIMVAEGGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKR
        E+        D   W YT+SG+Y+V+SGY      I      +     +   ++ +IW    +PK+++F+W+   N L V   L  R L  +  C  C  
Subjt:  EIPLCRGLDDDRAVWHYTNSGEYSVRSGY---QSAIMVAEGGEASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKR

Query:  ENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREW---LDKEDPSREGLS-LFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGE
          ET+NH+L +C  AR  W  S + + +GG     +A S      W   L   +P  E  S L  + LW+ WK RN +VF     + +  +    +++ E
Subjt:  ENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREW---LDKEDPSREGLS-LFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGE

Query:  F--------MGTMERRGREERDRVEPAKGPYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGF
        +         GT  +  R    R  P    +           DA W R +   G+GW L  + G  +   AR   +  + L AE  A+   +       +
Subjt:  F--------MGTMERRGREERDRVEPAKGPYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKGSRCMNCLHAEGYALLHGLEWTKMRGF

Query:  DEVAVYSGCKRLVNIVNGRESCPVDFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKYGL
        + V   S  + L+ I+N  E  P   +P  Q +  +   F   +  FI RE N  A  +A+  L
Subjt:  DEVAVYSGCKRLVNIVNGRESCPVDFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKYGL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.9e-28

39.87

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Query:  LALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKR-CGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFW
        +ALP+Y M+CF+L   +CKK+ S + +FWW + + K+ I W AW+ L K K   GGL  +DL  FN ALLAKQ +R++ +P +LL+R+  +RY    S  
Subjt:  LALPMYTMNCFKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKR-CGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFW

Query:  EAGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWLPRPITFKPI
        E  V    S+ WRSI+ GRE+L  G    +G     ++W D W+       P+
Subjt:  EAGVKGNASWGWRSIMAGREILKMGFRWRVGARSKIRIWEDPWLPRPITFKPI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCCTCAGTGCTCACGAATTCACACCGGAGGGAAAGAAAATGGAAAGGAGAGGAAGAGATGAGCAATGTGATATTCAGTAGAAACGTGGGACAGGAGAGGAGAGCCCA
AATCACAGAAGTGTTGGGGATACAAGGGGCTAGTGGGTTGGGGAAGTATTTGGGTTTGAACGTGGAATGTGGTCTGTCTAAGAGGGAAACTTTCGCAAATGTTATGCGAA
CCGTGGATGGAAGGCTGTCGGGATGGGTTGAACAATATTTATCTCAAGCAGGGAAGGAGGTATTGCTGAAGGCAGTAGCGTTAGCTCTTCCAATGTATACCATGAATTGT
TTCAAACTTCCCTTGAATGTGTGTAAGAAGATTAACAGTAGACTTGCTAAGTTTTGGTGGCAGACGAAGAAAGGTAAAAAGGGTATCCATTGGGGAGCTTGGAAAGACCT
GTCAAAGCATAAAAGATGTGGGGGCCTTAATCTGAAAGATCTGCACAGCTTTAACTTGGCTTTATTAGCAAAGCAGGGTTGGCGTTTGCTAACGAGGCCTGAAAGCTTAT
TGGCTCGAATATATGCGGCTAGATATCTTGGGAGGGTGTCATTTTGGGAAGCGGGAGTGAAAGGGAATGCATCATGGGGGTGGAGGAGTATTATGGCAGGGAGGGAAATC
CTAAAAATGGGGTTTAGATGGAGAGTAGGGGCGAGGTCGAAGATAAGGATCTGGGAGGATCCATGGCTCCCTAGGCCGATTACCTTTAAGCCTATTGGCCGATTGGGCAG
CCTATGGACGCTGGTGAGGGAGCTGATGAGTGAGCCTGGCGAGGGATGGGATGAGGGGAGAGTTCGGAGCTGCCTTTTGCCTGAAGATGCTGACATGGTGTTAGAAATCC
CACTGTGTAGGGGGCTTGATGATGATAGAGCGGTCTGGCATTATACAAACTCGGGAGAGTACTCGGTTCGGTCTGGTTATCAATCGGCCATAATGGTGGCGGAGGGAGGG
GAGGCTAGTGACCGGTCAGCCACAAGAAATCTATGGAATGAGATTTGGAATCTTCCATGTACGCCAAAAGTTCGAAATTTCATTTGGCGGGCATGCAGGAATTTCCTTGC
AGTAAATGTGAATTTGTGGAAGAGGGGATTACGAGTGGATGGGATCTGTGGGGTATGTAAGAGAGAGAATGAGACAATAAACCATGTGTTACTAGAGTGCGATCCGGCAA
GGGCCTTTTGGTTTGGGTCACCTCTTCAGCTCGACATGGGCGGGTTTAGGCGGCTAAACTTTGCCTGTAGTTGGGGAAGAATCCGGGAATGGCTGGATAAGGAAGATCCA
TCAAGGGAAGGGTTGAGCCTGTTTTCTTTCGGGTTATGGAAACAGTGGAAGAGGAGGAATAGTATAGTGTTTGAAAACGGTCACATGGATATTGAGAATTGTATCGGTGT
TGTGTGTGAAGAGATGGGGGAGTTTATGGGGACGATGGAGAGGAGGGGACGAGAGGAACGGGACAGGGTGGAACCAGCAAAGGGCCCGTATAGTGGGTTGGGCCCTGTAG
CGATGTTGTTTGTTGATGCTGCATGGGAGAGGGTTTCTCTGAACACAGGTCTAGGATGGCAGTTAACTGCTGACGATGGTGCCACACGGCTTGATGAGGCTAGGAAAGGG
TCGCGCTGCATGAACTGCTTGCATGCAGAAGGCTACGCGCTATTGCATGGATTGGAATGGACCAAGATGAGAGGATTTGACGAGGTAGCTGTATACTCAGGTTGTAAGCG
CTTGGTGAATATAGTGAATGGGCGGGAATCATGTCCAGTGGATTTTGAGCCTATATGGCAAAAAATAGGCCTAATGTGTGAGAGCTTTAATTCCTGTCAGATTGATTTCA
TTCGAAGAGAACATAATGGGAATGCCCACTGTTTAGCCAAGTATGGCTTATGTATTCCTTCTATATGA

mRNA sequence

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Protein sequence

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MSSVLTNSHRRERKWKGEEEMSNVIFSRNVGQERRAQITEVLGIQGASGLGKYLGLNVECGLSKRETFANVMRTVDGRLSGWVEQYLSQAGKEVLLKAVALALPMYTMNC
FKLPLNVCKKINSRLAKFWWQTKKGKKGIHWGAWKDLSKHKRCGGLNLKDLHSFNLALLAKQGWRLLTRPESLLARIYAARYLGRVSFWEAGVKGNASWGWRSIMAGREI
LKMGFRWRVGARSKIRIWEDPWLPRPITFKPIGRLGSLWTLVRELMSEPGEGWDEGRVRSCLLPEDADMVLEIPLCRGLDDDRAVWHYTNSGEYSVRSGYQSAIMVAEGG
EASDRSATRNLWNEIWNLPCTPKVRNFIWRACRNFLAVNVNLWKRGLRVDGICGVCKRENETINHVLLECDPARAFWFGSPLQLDMGGFRRLNFACSWGRIREWLDKEDP
SREGLSLFSFGLWKQWKRRNSIVFENGHMDIENCIGVVCEEMGEFMGTMERRGREERDRVEPAKGPYSGLGPVAMLFVDAAWERVSLNTGLGWQLTADDGATRLDEARKG
SRCMNCLHAEGYALLHGLEWTKMRGFDEVAVYSGCKRLVNIVNGRESCPVDFEPIWQKIGLMCESFNSCQIDFIRREHNGNAHCLAKYGLCIPSI

Lag0007618 (gene) of Sponge gourd (AG-4) v1 genome