; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007621 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007621
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:2074210..2075187
RNA-Seq ExpressionLag0007621
SyntenyLag0007621
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]2.3e-2433.33Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        ++GG W FD  +L+  E +GS  +  L+FRYV FW+   NLP  C  R+    L   +G+ ++ +  + G+  GQ +R+RV ++V  PL+RG  +  G  
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEGAEVKGKLS--FGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRG
             + + YE+LP+FCY+CGK+GH+ ++C     E+    S  FG  MR    ++    G+K         SP G   G
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEGAEVKGKLS--FGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRG

TXG57565.1 hypothetical protein EZV62_015394 [Acer yangbiense]7.3e-2643.94Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        + GG WSFDDA+++ EE TG   I  L+F  V FWVH  NLP +C  ++ A+ L   IGE  + +T   G   G+ LRVRV +++GKPLRR   +     
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECRE
        G+   +P+ +E+LP+FC++CG LGHV + C E
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECRE

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.5e-2331.12Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        MK G W FD A+++ ++   S NI  LEF  V+FW+H  +LP     +  A  L N+IG F D + ++ G   G +LR+RV +++ KPLRRG  I     
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQEC--REEGAEVKGKLS--FGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRGKYFGIGREEKVTSWRKED
            WIP+ YE+LPDFCYFCG +GH   +C  R   A+   + +  +G  +R   +  G  +G+K        +SP            RE+   S     
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQEC--REEGAEVKGKLS--FGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRGKYFGIGREEKVTSWRKED

Query:  KREEVATLNQNISDFGHQAGIAGQNNEVRPKGNPSTVEREHESSG--SGPNRAVG-ESQIQNYQTETELKNSE-RRKELETQVVQK
        K   V    Q +S+  +Q G   Q          +  E+  ++ G  S    A+G ES   ++      K+S+  RK+L + V+ K
Subjt:  KREEVATLNQNISDFGHQAGIAGQNNEVRPKGNPSTVEREHESSG--SGPNRAVG-ESQIQNYQTETELKNSE-RRKELETQVVQK

XP_024955847.1 uncharacterized protein LOC112498636 [Citrus sinensis]9.8e-2336.67Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        M GG W FD A+++  E  G  +I    F +  FWVH +N+P     R   + L   IG  E+ +TD+ G   G+  R+R+ +++ KPLR+   ++T  +
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEGAEVKGKLSFGVEMRET
        G    IP+ YE+LPDFC+ CG +GH ++EC E   + K  L +G  M+ T
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEGAEVKGKLSFGVEMRET

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]7.5e-2335.58Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        +  G W+FD  +L+  E+  +     ++   V FWVH  NLP V   +K  E + N++G+F D + +D G + G+T+R+RV ++V KPLRRG  +     
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEGAEVKG----KLSFGVEMR-ETQTSKGISR
         +  W+   YE+LP +CYFCG+LGH  +EC ++ +   G     L +G  +R +   SKG  R
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEGAEVKG----KLSFGVEMR-ETQTSKGISR

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)2.4e-2234.64Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        M GG W FD A++   E TG  +I   +F +VSFWV   ++P +C  +  A  L   IG+ E+ ETD  G+  GQ LR+R+ +++ KPL++   ++   +
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIP--VTYEKLPDFCYFCGKLGHVHQECREEGAEVKGKLSFGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDR
         D   IP  V YE+LPDFC+ CG++GH ++EC    ++ K +L++G  ++    ++ + +G             RGRDR
Subjt:  GDTKWIP--VTYEKLPDFCYFCGKLGHVHQECREEGAEVKGKLSFGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDR

A0A5C7H9Y2 CCHC-type domain-containing protein1.1e-2433.33Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        ++GG W FD  +L+  E +GS  +  L+FRYV FW+   NLP  C  R+    L   +G+ ++ +  + G+  GQ +R+RV ++V  PL+RG  +  G  
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEGAEVKGKLS--FGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRG
             + + YE+LP+FCY+CGK+GH+ ++C     E+    S  FG  MR    ++    G+K         SP G   G
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEGAEVKGKLS--FGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRG

A0A5C7HLA0 CCHC-type domain-containing protein3.5e-2643.94Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        + GG WSFDDA+++ EE TG   I  L+F  V FWVH  NLP +C  ++ A+ L   IGE  + +T   G   G+ LRVRV +++GKPLRR   +     
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECRE
        G+   +P+ +E+LP+FC++CG LGHV + C E
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECRE

A0A5C7IYW8 CCHC-type domain-containing protein1.1e-2230.26Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        + GG W FD+++L+ E+++G  +++ L F+ V FW+   N P +C  ++    L   IGE  D +    G+  G+ +R+RV ++V KPL+R   +    K
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEG----AEVKGKLSFGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRGKYFGIGREEKVTSWRKED
        G    + + YEKLP++CY CG LGH H+EC + G     ++     FG  MR T    G +RG        +   PR +D G    I   + +   R E+
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEG----AEVKGKLSFGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRGKYFGIGREEKVTSWRKED

Query:  KREEVATL---NQNISDFGHQAGIAGQN
         R    T     Q++    H   +  +N
Subjt:  KREEVATL---NQNISDFGHQAGIAGQN

A0A6J1DU55 uncharacterized protein LOC1110231353.6e-2331.12Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        MK G W FD A+++ ++   S NI  LEF  V+FW+H  +LP     +  A  L N+IG F D + ++ G   G +LR+RV +++ KPLRRG  I     
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQEC--REEGAEVKGKLS--FGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRGKYFGIGREEKVTSWRKED
            WIP+ YE+LPDFCYFCG +GH   +C  R   A+   + +  +G  +R   +  G  +G+K        +SP            RE+   S     
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQEC--REEGAEVKGKLS--FGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRGKYFGIGREEKVTSWRKED

Query:  KREEVATLNQNISDFGHQAGIAGQNNEVRPKGNPSTVEREHESSG--SGPNRAVG-ESQIQNYQTETELKNSE-RRKELETQVVQK
        K   V    Q +S+  +Q G   Q          +  E+  ++ G  S    A+G ES   ++      K+S+  RK+L + V+ K
Subjt:  KREEVATLNQNISDFGHQAGIAGQNNEVRPKGNPSTVEREHESSG--SGPNRAVG-ESQIQNYQTETELKNSE-RRKELETQVVQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding6.2e-0726.87Show/hide
Query:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK
        ++ G WSF+D + + +  T   + DA EF+ + FW+  + +P     R     +  SIGE                             R G  ++T L 
Subjt:  MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLK

Query:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEG
         D   +   YEKL +FC  CG L H   EC   G
Subjt:  GDTKWIPVTYEKLPDFCYFCGKLGHVHQECREEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAGGGTCGTGGAGCTTCGATGATGCCATACTAATCTTTGAGGAGATAACAGGAAGCTGCAACATTGATGCGTTGGAATTCAGGTATGTGTCATTCTGGGTCCA
CTTCCAAAACTTACCGAGAGTTTGCTTTTGCAGAAAATATGCTGAAGCCCTGGCCAACTCTATAGGAGAGTTTGAAGATGCTGAAACAGATGACCATGGGAAGATGGGAG
GACAAACTCTGCGAGTTAGAGTTCGTATGGAAGTAGGGAAACCACTCAGAAGAGGAACGAATATAAAAACTGGGTTAAAAGGAGACACCAAGTGGATACCAGTTACCTAC
GAGAAGCTTCCCGACTTCTGTTATTTCTGTGGTAAATTGGGGCATGTTCATCAGGAATGCAGGGAGGAAGGAGCAGAAGTGAAAGGAAAACTAAGCTTTGGGGTTGAAAT
GCGAGAAACTCAAACAAGCAAAGGGATATCCAGAGGTCAAAAGCCACCATTACGTTTCCAAAACTTCCAAAGCCCTAGAGGAAGAGACAGAGGCAAATATTTTGGAATAG
GAAGAGAGGAAAAGGTTACATCCTGGAGAAAAGAAGACAAGAGGGAAGAGGTAGCTACTCTGAACCAGAACATCTCAGACTTCGGTCATCAGGCCGGAATCGCTGGCCAA
AACAATGAAGTGAGGCCAAAAGGGAACCCATCGACGGTGGAGAGAGAACACGAATCATCGGGAAGCGGTCCCAATAGAGCCGTTGGAGAAAGTCAGATACAGAACTACCA
GACGGAGACAGAGCTAAAGAACAGTGAAAGAAGAAAGGAATTAGAAACCCAAGTGGTACAAAAGGACACAATCATGACTGACAGGGCTATCATGGCCAAGAACGATGGGA
CAAACACAGAAAAGACAAAAAACCAAAGTGGACCAAAAAATGGATTCCATAAAAGCCCAAACCCAAAACCAAAAAAGACCCCCATCCAGAACCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAGGGTCGTGGAGCTTCGATGATGCCATACTAATCTTTGAGGAGATAACAGGAAGCTGCAACATTGATGCGTTGGAATTCAGGTATGTGTCATTCTGGGTCCA
CTTCCAAAACTTACCGAGAGTTTGCTTTTGCAGAAAATATGCTGAAGCCCTGGCCAACTCTATAGGAGAGTTTGAAGATGCTGAAACAGATGACCATGGGAAGATGGGAG
GACAAACTCTGCGAGTTAGAGTTCGTATGGAAGTAGGGAAACCACTCAGAAGAGGAACGAATATAAAAACTGGGTTAAAAGGAGACACCAAGTGGATACCAGTTACCTAC
GAGAAGCTTCCCGACTTCTGTTATTTCTGTGGTAAATTGGGGCATGTTCATCAGGAATGCAGGGAGGAAGGAGCAGAAGTGAAAGGAAAACTAAGCTTTGGGGTTGAAAT
GCGAGAAACTCAAACAAGCAAAGGGATATCCAGAGGTCAAAAGCCACCATTACGTTTCCAAAACTTCCAAAGCCCTAGAGGAAGAGACAGAGGCAAATATTTTGGAATAG
GAAGAGAGGAAAAGGTTACATCCTGGAGAAAAGAAGACAAGAGGGAAGAGGTAGCTACTCTGAACCAGAACATCTCAGACTTCGGTCATCAGGCCGGAATCGCTGGCCAA
AACAATGAAGTGAGGCCAAAAGGGAACCCATCGACGGTGGAGAGAGAACACGAATCATCGGGAAGCGGTCCCAATAGAGCCGTTGGAGAAAGTCAGATACAGAACTACCA
GACGGAGACAGAGCTAAAGAACAGTGAAAGAAGAAAGGAATTAGAAACCCAAGTGGTACAAAAGGACACAATCATGACTGACAGGGCTATCATGGCCAAGAACGATGGGA
CAAACACAGAAAAGACAAAAAACCAAAGTGGACCAAAAAATGGATTCCATAAAAGCCCAAACCCAAAACCAAAAAAGACCCCCATCCAGAACCAATAA
Protein sequenceShow/hide protein sequence
MKGGSWSFDDAILIFEEITGSCNIDALEFRYVSFWVHFQNLPRVCFCRKYAEALANSIGEFEDAETDDHGKMGGQTLRVRVRMEVGKPLRRGTNIKTGLKGDTKWIPVTY
EKLPDFCYFCGKLGHVHQECREEGAEVKGKLSFGVEMRETQTSKGISRGQKPPLRFQNFQSPRGRDRGKYFGIGREEKVTSWRKEDKREEVATLNQNISDFGHQAGIAGQ
NNEVRPKGNPSTVEREHESSGSGPNRAVGESQIQNYQTETELKNSERRKELETQVVQKDTIMTDRAIMAKNDGTNTEKTKNQSGPKNGFHKSPNPKPKKTPIQNQ