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Lag0007641 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007641
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:2324032..2325368
RNA-Seq ExpressionLag0007641
SyntenyLag0007641
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4377212.1 hypothetical protein G4B88_009204 [Cannabis sativa]1.9e-1436.42Show/hide
Query:  DRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKHWRFTGMREMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPI-----QLVIGRNP
        D  G SGGL LLW E+ +VS+++FS+ HID+ +   GK       R+    V  RLDRF  N ++  LFP+ +V N D   SDHRP+      +V  +  
Subjt:  DRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKHWRFTGMREMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPI-----QLVIGRNP

Query:  IKKRSYRFQFEEFLSKREDCKDIITKSVAW----SPIDRSGIKLHQDLHQCAKALNGWGKQQ
         KKR +R  FE    K E+C DI+  +  W     P+D S   +     +CA+ L  W K +
Subjt:  IKKRSYRFQFEEFLSKREDCKDIITKSVAW----SPIDRSGIKLHQDLHQCAKALNGWGKQQ

PNX87709.1 endonuclease/exonuclease/phosphatase family protein, partial [Trifolium pratense]1.3e-1028.5Show/hide
Query:  CSWIGESMGIPKFD---RKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGK-HWRFTGMREMDDQ-----------------------------VST
        C  +G    +PKF    R+G  GGL LLW+  +  +I NFS +HID  IT   +  WR TG      +                             V  
Subjt:  CSWIGESMGIPKFD---RKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGK-HWRFTGMREMDDQ-----------------------------VST

Query:  RLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQLVIGRNPIKKRS---YRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKALNGWGK
        RLDR  AN ++  +FPN K+ NL    SDH PI  ++ R+PI +     ++F+FE       +  +++ +   W+  + S   +   L  CA+ L+ W +
Subjt:  RLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQLVIGRNPIKKRS---YRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKALNGWGK

XP_012851547.1 PREDICTED: uncharacterized protein LOC105971242 [Erythranthe guttata]2.3e-1229.63Show/hide
Query:  AKTPARIYEYYLMECSWIGESMGIPKFDRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKH--WRFTGMREMDDQ------VSTRLDRFGANPNF
        ++T A +     ++  W    +G+ K    G SGGL L W++++ V + ++S +HID+ +    ++  WR TG     +Q       S  LDR  A+  +
Subjt:  AKTPARIYEYYLMECSWIGESMGIPKFDRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKH--WRFTGMREMDDQ------VSTRLDRFGANPNF

Query:  CTLFPNYKVHNLDWAKSDHRPIQLVI---GRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKALNGWGK
         + FP+ +VH+L+++ SDH PI+LV+    R  I  +   F+FE    +RE+C+ II      S    S   +     +C  AL  W K
Subjt:  CTLFPNYKVHNLDWAKSDHRPIQLVI---GRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKALNGWGK

XP_024164679.1 uncharacterized protein LOC112171781 [Rosa chinensis]9.9e-1132.7Show/hide
Query:  RKGLS--GGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKH--WRFTG----------------MREMD-----------------DQVSTRLDRFGANPN
        +KG+S  GGLCLLW ++V V+++ +S  HID  I   G    WRFTG                +R++                  ++V  RLDRF ++  
Subjt:  RKGLS--GGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKH--WRFTG----------------MREMD-----------------DQVSTRLDRFGANPN

Query:  FCTLFPNYKVHNLDWAKSDHRPIQLVIGRNPI--KKRSYRFQFEEFLSKREDCKDIITK
           LFP  +V +LD  KSDH PI L +  +    KKR   F+FEEF    + C++++ +
Subjt:  FCTLFPNYKVHNLDWAKSDHRPIQLVIGRNPI--KKRSYRFQFEEFLSKREDCKDIITK

XP_030963753.1 uncharacterized protein LOC115984908 [Quercus lobata]1.8e-1229.51Show/hide
Query:  KGLSGGLCLLWKEEVDVSIRNFSIHHIDSTIT------------------------------WCGKHWRFTGMREMDDQVSTRLDRFGANPNFCTLFPNY
        +G   GL LLW  +  + I+++S +HID+ IT                              +CG  + +  M+E   ++  RLDR  AN  +   F + 
Subjt:  KGLSGGLCLLWKEEVDVSIRNFSIHHIDSTIT------------------------------WCGKHWRFTGMREMDDQVSTRLDRFGANPNFCTLFPNY

Query:  KVHNLDWAKSDHRPIQLVIGRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWS----PIDRSGIKLHQDLHQCAKALNGWGK
         VH+L  + SDH  +       PI KR+ RF FE   +KR+DC+++I    AW+     I   GI    +L +CA AL+ W +
Subjt:  KVHNLDWAKSDHRPIQLVIGRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWS----PIDRSGIKLHQDLHQCAKALNGWGK

TrEMBL top hitse value%identityAlignment
A0A2N9FYH3 CCHC-type domain-containing protein3.7e-1125Show/hide
Query:  DRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTI-TWCGKHWRFTGM------------------------------------------------------
        DR+   GGL LLW + VD+ I+++S HHID  +    G+ WRFTG                                                       
Subjt:  DRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTI-TWCGKHWRFTGM------------------------------------------------------

Query:  -REMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQL---VIGRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQ
         R   + V  RLDR  A   +  LFP   + +  +A SDH  + L    +     +++  RF FE    + E C+++I ++     +     +L Q + Q
Subjt:  -REMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQL---VIGRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQ

Query:  CAKALNGWGKQQ
        C  AL  W K Q
Subjt:  CAKALNGWGKQQ

A0A7J6G362 Uncharacterized protein9.3e-1536.42Show/hide
Query:  DRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKHWRFTGMREMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPI-----QLVIGRNP
        D  G SGGL LLW E+ +VS+++FS+ HID+ +   GK       R+    V  RLDRF  N ++  LFP+ +V N D   SDHRP+      +V  +  
Subjt:  DRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKHWRFTGMREMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPI-----QLVIGRNP

Query:  IKKRSYRFQFEEFLSKREDCKDIITKSVAW----SPIDRSGIKLHQDLHQCAKALNGWGKQQ
         KKR +R  FE    K E+C DI+  +  W     P+D S   +     +CA+ L  W K +
Subjt:  IKKRSYRFQFEEFLSKREDCKDIITKSVAW----SPIDRSGIKLHQDLHQCAKALNGWGKQQ

A0A803P371 Uncharacterized protein2.1e-1124.81Show/hide
Query:  DNKGPTLEVPNISSPRN-SVRLATDTKDMDDNKTSKKKGAMWKKRALSRICSLWNDSGRTCGPAKTPARIYEYYLMECSWIGESM---------------
        DNKG   E+ +++S +N  V L  +  + DD++        W+        ++ +D       +K   R+    +++  W+ +S                
Subjt:  DNKGPTLEVPNISSPRN-SVRLATDTKDMDDNKTSKKKGAMWKKRALSRICSLWNDSGRTCGPAKTPARIYEYYLMECSWIGESM---------------

Query:  -GIPKFDRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTIT----WCGKHWRFTGM-REMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQL
         G    + +G SGG+ LLW+ + +V +      +ID  I+     C   WR T + R+ DD V  R+DR   N ++  LFP  K+ NL+ + S+H P+ L
Subjt:  -GIPKFDRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTIT----WCGKHWRFTGM-REMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQL

Query:  VIGRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKALNGWGK
        V     +   +  F+FE    K   C  +I + V+   +D     + + +  C + L  WGK
Subjt:  VIGRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKALNGWGK

A0A803PIN7 Uncharacterized protein5.6e-1230.23Show/hide
Query:  DRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGK-HWRFTGM-------------------REMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWA
        D +G SGGL LLWK+  +V I+ FS +H+D+T+   G   WRFTG+                   R  +D +  RLD+     ++ ++FP   ++NL+  
Subjt:  DRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGK-HWRFTGM-------------------REMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWA

Query:  KSDHRPIQLVIGRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQD-LHQCAKALNGWGK
         SDH PI L++         + F FE    +   CK ++     W     SG+   QD + +C + L  WG+
Subjt:  KSDHRPIQLVIGRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQD-LHQCAKALNGWGK

A0A803PUH4 Uncharacterized protein9.6e-1230.77Show/hide
Query:  GLSGGLCLLWKEEVDVSIRNFSIHHIDSTI-TWCGKHWRFTG-------------------------------------MREMD--------------DQ
        G SGGL LLW   VD +I +FS  HIDS I    G+ WRFTG                                     +RE++              + 
Subjt:  GLSGGLCLLWKEEVDVSIRNFSIHHIDSTI-TWCGKHWRFTG-------------------------------------MREMD--------------DQ

Query:  VSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQLVI------GRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKA
        +  RLDR   NP +  LFP  KV++LD   SDH PI L          N  +  S RF FE   +  E C +I+T+S        + + L   L  C KA
Subjt:  VSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQLVI------GRNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKA

Query:  LNGWGKQQ
        L  W K +
Subjt:  LNGWGKQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTGGATCTTACTCTAAAGGCCCAACTATGATGGATCAAAAAAGTTCTTGTGTTAAACGTCTTGTGTTGGAGGATGACGGTATGCAATCAATTGTGGAGCCCAT
AATGACCGACAATAAAGGCCCAACTTTGGAGGTGCCAAATATTAGTTCTCCACGAAATTCGGTAAGGCTCGCTACTGATACGAAGGACATGGACGACAATAAAACTTCCA
AAAAGAAAGGAGCAATGTGGAAAAAGAGAGCTCTGAGCAGGATTTGTTCCCTTTGGAATGATTCTGGACGTACATGTGGACCTGCAAAAACTCCCGCCAGGATATATGAA
TATTATCTGATGGAATGTTCGTGGATTGGGGAGTCCATGGGCATTCCGAAATTTGATAGAAAGGGTCTTAGTGGAGGGTTGTGTTTGTTATGGAAAGAAGAAGTAGATGT
ATCTATTCGAAATTTCTCCATTCATCATATAGATTCTACTATTACATGGTGTGGGAAACACTGGAGGTTCACAGGAATGCGTGAAATGGACGATCAGGTGAGTACCAGGC
TAGATCGGTTCGGGGCAAATCCAAACTTTTGTACTCTATTTCCCAACTACAAGGTACATAATTTGGATTGGGCAAAGTCTGATCATAGACCTATTCAATTAGTTATTGGT
AGGAATCCAATAAAAAAAAGGTCTTATAGATTCCAATTTGAAGAATTCTTGTCCAAGCGTGAAGACTGTAAAGATATTATAACCAAATCAGTGGCATGGAGTCCAATTGA
CCGTTCGGGAATAAAGTTGCATCAGGATCTACATCAGTGTGCCAAAGCCCTTAATGGCTGGGGAAAACAACAGAATTGTACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGTGGATCTTACTCTAAAGGCCCAACTATGATGGATCAAAAAAGTTCTTGTGTTAAACGTCTTGTGTTGGAGGATGACGGTATGCAATCAATTGTGGAGCCCAT
AATGACCGACAATAAAGGCCCAACTTTGGAGGTGCCAAATATTAGTTCTCCACGAAATTCGGTAAGGCTCGCTACTGATACGAAGGACATGGACGACAATAAAACTTCCA
AAAAGAAAGGAGCAATGTGGAAAAAGAGAGCTCTGAGCAGGATTTGTTCCCTTTGGAATGATTCTGGACGTACATGTGGACCTGCAAAAACTCCCGCCAGGATATATGAA
TATTATCTGATGGAATGTTCGTGGATTGGGGAGTCCATGGGCATTCCGAAATTTGATAGAAAGGGTCTTAGTGGAGGGTTGTGTTTGTTATGGAAAGAAGAAGTAGATGT
ATCTATTCGAAATTTCTCCATTCATCATATAGATTCTACTATTACATGGTGTGGGAAACACTGGAGGTTCACAGGAATGCGTGAAATGGACGATCAGGTGAGTACCAGGC
TAGATCGGTTCGGGGCAAATCCAAACTTTTGTACTCTATTTCCCAACTACAAGGTACATAATTTGGATTGGGCAAAGTCTGATCATAGACCTATTCAATTAGTTATTGGT
AGGAATCCAATAAAAAAAAGGTCTTATAGATTCCAATTTGAAGAATTCTTGTCCAAGCGTGAAGACTGTAAAGATATTATAACCAAATCAGTGGCATGGAGTCCAATTGA
CCGTTCGGGAATAAAGTTGCATCAGGATCTACATCAGTGTGCCAAAGCCCTTAATGGCTGGGGAAAACAACAGAATTGTACGTGA
Protein sequenceShow/hide protein sequence
MGRGSYSKGPTMMDQKSSCVKRLVLEDDGMQSIVEPIMTDNKGPTLEVPNISSPRNSVRLATDTKDMDDNKTSKKKGAMWKKRALSRICSLWNDSGRTCGPAKTPARIYE
YYLMECSWIGESMGIPKFDRKGLSGGLCLLWKEEVDVSIRNFSIHHIDSTITWCGKHWRFTGMREMDDQVSTRLDRFGANPNFCTLFPNYKVHNLDWAKSDHRPIQLVIG
RNPIKKRSYRFQFEEFLSKREDCKDIITKSVAWSPIDRSGIKLHQDLHQCAKALNGWGKQQNCT