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Lag0007643 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007643
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:2326253..2326639
RNA-Seq ExpressionLag0007643
SyntenyLag0007643
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV65310.1 DUF4283 domain-containing protein, partial [Cephalotus follicularis]1.7e-1032.77Show/hide
Query:  WSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFEKYLLIV
        W  L LT  EE+  +  D S ++        CL+G L   K  + EV +   +++WR   GL++  +G ++F+F F N+ED  R+L   PW F+K++L+ 
Subjt:  WSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFEKYLLIV

Query:  EFLIRAQKPSEYSFSFVAF
        E L +  +PS  S    +F
Subjt:  EFLIRAQKPSEYSFSFVAF

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.7e-1535.94Show/hide
Query:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRID-RGLQVEILGKDMFIFRFRNEEDLVRILNQGP
        M  S+L+++W    LT  E+ ++VD D SA+E TG+ L   L+ KLL  + +S  V + T K  W++D +   V+I+G ++F+F F    D  RIL  GP
Subjt:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRID-RGLQVEILGKDMFIFRFRNEEDLVRILNQGP

Query:  WLFEKYLLIVEFLIRAQKPSEYSFSFVA
        W F++ L+I++  +   KP +  F  V+
Subjt:  WLFEKYLLIVEFLIRAQKPSEYSFSFVA

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.2e-1736.72Show/hide
Query:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPW
        MD  +L+ DW K  LT  E+++++D D  AV+   Q L   L+GKLL  +++SA+V  +     W+++  L VE +GK++F+F F  E D+ R++  GPW
Subjt:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPW

Query:  LFEKYLLIVEFLIRAQKPSEYSFSFVAF
         F+K L++++    ++  SE  F+ VAF
Subjt:  LFEKYLLIVEFLIRAQKPSEYSFSFVAF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.0e-1130.83Show/hide
Query:  LMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRID-RGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFEK
        L+++W    LT  EE+ ++D D SA   TG  L   L+GKL + + ++  V + T +  W+++    +V+ LG ++F+F F    D  +I   GPW F++
Subjt:  LMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRID-RGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFEK

Query:  YLLIVEFLIRAQKPSEYSFS
         L+++   +    PSE  F+
Subjt:  YLLIVEFLIRAQKPSEYSFS

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.2e-1036.22Show/hide
Query:  SLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILG---CCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWL
        SL+D    LSLT +EED  V   R   E T  ++G    CL+GKLL  +  + E  + T  +VW+  +G+QV ++G ++F+F F +  D  R+L+ GPW 
Subjt:  SLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILG---CCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWL

Query:  FEKYLLIVEFLIRAQKPSEYSFSFVAF
        F+K+LL++  +    +PS+   + V F
Subjt:  FEKYLLIVEFLIRAQKPSEYSFSFVAF

TrEMBL top hitse value%identityAlignment
A0A1Q3BBD8 DUF4283 domain-containing protein (Fragment)8.2e-1132.77Show/hide
Query:  WSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFEKYLLIV
        W  L LT  EE+  +  D S ++        CL+G L   K  + EV +   +++WR   GL++  +G ++F+F F N+ED  R+L   PW F+K++L+ 
Subjt:  WSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFEKYLLIV

Query:  EFLIRAQKPSEYSFSFVAF
        E L +  +PS  S    +F
Subjt:  EFLIRAQKPSEYSFSFVAF

A0A2N9IG44 CCHC-type domain-containing protein7.4e-1236.36Show/hide
Query:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPW
        M   +L++DW K SLT+ E   S   +   + ++  I   CLLGKL+  K+ S EV + T   +W   RG+    +  ++F F+F NE + +R+LN  PW
Subjt:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPW

Query:  LFEKYLLIVE
        LF+ YLL ++
Subjt:  LFEKYLLIVE

A0A6J1BSZ1 uncharacterized protein LOC1110054818.4e-1635.94Show/hide
Query:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRID-RGLQVEILGKDMFIFRFRNEEDLVRILNQGP
        M  S+L+++W    LT  E+ ++VD D SA+E TG+ L   L+ KLL  + +S  V + T K  W++D +   V+I+G ++F+F F    D  RIL  GP
Subjt:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRID-RGLQVEILGKDMFIFRFRNEEDLVRILNQGP

Query:  WLFEKYLLIVEFLIRAQKPSEYSFSFVA
        W F++ L+I++  +   KP +  F  V+
Subjt:  WLFEKYLLIVEFLIRAQKPSEYSFSFVA

A0A6J1DU55 uncharacterized protein LOC1110231351.5e-1736.72Show/hide
Query:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPW
        MD  +L+ DW K  LT  E+++++D D  AV+   Q L   L+GKLL  +++SA+V  +     W+++  L VE +GK++F+F F  E D+ R++  GPW
Subjt:  MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPW

Query:  LFEKYLLIVEFLIRAQKPSEYSFSFVAF
         F+K L++++    ++  SE  F+ VAF
Subjt:  LFEKYLLIVEFLIRAQKPSEYSFSFVAF

A0A803MW53 Uncharacterized protein4.3e-1232Show/hide
Query:  SLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQI-LGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFE
        SLM DW +L LT  E  +   +D S  E+     +   L+GKLL  K  + E  ++  K +WRID  + +  +  ++F+F+F N +D  ++L   PW+F+
Subjt:  SLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQI-LGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFE

Query:  KYLLIVEFLIRAQKPSEYSFSFVAF
          +L+++ +   ++PSE SF    F
Subjt:  KYLLIVEFLIRAQKPSEYSFSFVAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCTTCGTCTTTAATGGATGATTGGTCAAAACTCAGCCTCACTCAGGCTGAAGAGGATGTTTCTGTTGATGCGGATCGTTCAGCGGTGGAGCAGACTGGGCAAAT
TTTGGGTTGTTGTTTGCTCGGTAAATTGTTGTTGCACAAGATGCTGTCTGCTGAAGTCAGGAGGAAAACGTTTAAAGCGGTGTGGAGAATTGATCGTGGACTACAAGTTG
AAATCCTTGGTAAGGATATGTTTATTTTCAGGTTCCGTAATGAAGAAGATCTTGTCCGGATCCTCAACCAAGGGCCATGGTTGTTTGAAAAATATCTTTTAATTGTGGAA
TTCCTGATCCGTGCTCAAAAGCCTTCTGAGTATAGTTTCTCATTCGTGGCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCCTTCGTCTTTAATGGATGATTGGTCAAAACTCAGCCTCACTCAGGCTGAAGAGGATGTTTCTGTTGATGCGGATCGTTCAGCGGTGGAGCAGACTGGGCAAAT
TTTGGGTTGTTGTTTGCTCGGTAAATTGTTGTTGCACAAGATGCTGTCTGCTGAAGTCAGGAGGAAAACGTTTAAAGCGGTGTGGAGAATTGATCGTGGACTACAAGTTG
AAATCCTTGGTAAGGATATGTTTATTTTCAGGTTCCGTAATGAAGAAGATCTTGTCCGGATCCTCAACCAAGGGCCATGGTTGTTTGAAAAATATCTTTTAATTGTGGAA
TTCCTGATCCGTGCTCAAAAGCCTTCTGAGTATAGTTTCTCATTCGTGGCTTTCTAG
Protein sequenceShow/hide protein sequence
MDPSSLMDDWSKLSLTQAEEDVSVDADRSAVEQTGQILGCCLLGKLLLHKMLSAEVRRKTFKAVWRIDRGLQVEILGKDMFIFRFRNEEDLVRILNQGPWLFEKYLLIVE
FLIRAQKPSEYSFSFVAF