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Lag0007664 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007664
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:2611623..2612993
RNA-Seq ExpressionLag0007664
SyntenyLag0007664
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4372682.1 hypothetical protein F8388_000849, partial [Cannabis sativa]2.1e-1839.44Show/hide
Query:  GLAEGGEDVLLVDAEGHAGQGGRDNGERCLLRNVCWVLTI-AFVLIVMDGVIVWDDCR-WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNA
        G AEG    +      H    G+  G   LL N  W +++ +F +  +D ++       WR TGFYG P A  R  +W LL RL+G  D PW+ GGDFN 
Subjt:  GLAEGGEDVLLVDAEGHAGQGGRDNGERCLLRNVCWVLTI-AFVLIVMDGVIVWDDCR-WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNA

Query:  ILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW
        +L  +EK GG D+ L+ +S FQ  +  C L+D GF G  FTW
Subjt:  ILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW

KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]2.5e-1943.8Show/hide
Query:  GRDNGERCLLRNVCWVLTIAFVLIVMDGVIV-WDDCRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQ
        GR  G   L +    V   +F L  +D +I   D   WR TG YG P    R  TW+LL RL   VD PWL+GGDFN +L  +EK GGR +   ++ AF+
Subjt:  GRDNGERCLLRNVCWVLTIAFVLIVMDGVIV-WDDCRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQ

Query:  NVVYSCGLLDPGFVGDHFTWC
        NV++ C L D GF G  +TWC
Subjt:  NVVYSCGLLDPGFVGDHFTWC

XP_042939562.1 uncharacterized protein LOC122274604 [Carya illinoinensis]1.2e-1842.86Show/hide
Query:  VLIVMDGVIVWDDCRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW
        VL+ ++G        W +TGFYG P  ++R ++W LL  L+   + PWL  GDFN ILC +EK+G   KP +++  F+  +Y CGL+D GF+G  FTW
Subjt:  VLIVMDGVIVWDDCRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW

XP_042972796.1 uncharacterized protein LOC122304603 [Carya illinoinensis]1.6e-1841.8Show/hide
Query:  GRDNGERCLLRNVCWVLTIAFVLIVMDGVIVWDD--CRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAF
        GR  G   L RN   +   +F L  +D  I   D    W+ TG YG    ++R +TWSLL  LR   + PWL+ GDFN +L Q EK GGR +P   + AF
Subjt:  GRDNGERCLLRNVCWVLTIAFVLIVMDGVIVWDD--CRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAF

Query:  QNVVYSCGLLDPGFVGDHFTWC
        ++V+  C L+D GF G  +TWC
Subjt:  QNVVYSCGLLDPGFVGDHFTWC

XP_042988712.1 uncharacterized protein LOC122316247 [Carya illinoinensis]7.2e-1944.83Show/hide
Query:  DCRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTWC
        D +W+ TG YG P  + R +TW+ +  LRG V  PWL+ GDFN +LC  EK GGR++P  ++  F+ ++  C  +D GF+G  FTWC
Subjt:  DCRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTWC

TrEMBL top hitse value%identityAlignment
A0A2N9GJ35 Uncharacterized protein3.5e-1948.42Show/hide
Query:  MDGVIVWDD-CRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW
        +DG +V +D  RWRLTGFYG+P A  R ++WSLL  LR   D PW+I GDFN I   +EK G  D+   +++AF+  +  C L D GF G  FTW
Subjt:  MDGVIVWDD-CRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW

A0A7J6DPD3 CCHC-type domain-containing protein1.3e-1851.81Show/hide
Query:  WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW
        WR TGFYG P A  RS++W LL RL+   D PW+ GGDFN IL  +EK GG D+ ++ ++ FQN +  C L D GF G  FTW
Subjt:  WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW

A0A7J6FPV7 CCHC-type domain-containing protein1.0e-1839.44Show/hide
Query:  GLAEGGEDVLLVDAEGHAGQGGRDNGERCLLRNVCWVLTI-AFVLIVMDGVIVWDDCR-WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNA
        G AEG    +      H    G+  G   LL N  W +++ +F +  +D ++       WR TGFYG P A  R  +W LL RL+G  D PW+ GGDFN 
Subjt:  GLAEGGEDVLLVDAEGHAGQGGRDNGERCLLRNVCWVLTI-AFVLIVMDGVIVWDDCR-WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNA

Query:  ILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW
        +L  +EK GG D+ L+ +S FQ  +  C L+D GF G  FTW
Subjt:  ILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW

A0A7J6GGL8 CCHC-type domain-containing protein1.3e-1851.81Show/hide
Query:  WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW
        WR TGFYG P A  RS++W LL RL+   D PW+ GGDFN IL  +EK GG D+ ++ ++ FQN +  C L D GF G  FTW
Subjt:  WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW

A0A7J6GL46 CCHC-type domain-containing protein1.3e-1851.81Show/hide
Query:  WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW
        WR TGFYG P A  RS++W LL RL+   D PW+ GGDFN IL  +EK GG D+ ++ ++ FQN +  C L D GF G  FTW
Subjt:  WRLTGFYGFPSADQRSQTWSLLSRLRGCVDTPWLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTTGTCTGAGGATAGATCGGTCGCTCAAAGAGATTTCCGATTGCAGGATTAAGAGGGGAAAGTGTTCCGGTGTCCAGTATTGTATGAGCGTATTCCAGACTTT
TGTTATGAGTGTGGTTGTTTGGGGCATTCGAGAAGGGAGTGCGGGGTTGTTGGGGAAGGTGTATTGGAGTAGGGGTGAGCAATATGGTGAATGGTTGAGAGCAGGGGTGG
GGTTAGGTGAGGTTAGGCGGTGGGTTCAGGAGGGAGGGCCGAAAAGTGTGGCAAACCGAGTGTCTGAGAAGCCTAAGCCTTCTTCTGATGGTGTAGGTGCAGTAGGGAGT
GGGGCGAGTCTGGTGAATAAGGAGGAGGGAAAGCAGAAAGTTGGGAGTGTTTTGGTAGAAAATGGACTCGCTGAAGGAGGTGAGGATGTGTTGCTGGTTGATGCTGAGGG
GCATGCAGGTCAAGGCGGCAGAGACAATGGGGAGAGATGTCTTCTGCGAAACGTTTGCTGGGTTTTGACCATTGCTTTTGTGTTGATTGTCATGGACGGAGTGATCGTAT
GGGATGATTGTCGGTGGCGGCTCACTGGTTTCTATGGTTTCCCTTCAGCGGATCAACGTTCTCAGACATGGTCCCTTCTCTCTAGATTGAGAGGTTGTGTGGATACGCCC
TGGCTGATTGGAGGTGATTTTAATGCAATCTTATGTCAGGATGAGAAGGATGGGGGTAGGGATAAGCCATTGGCTGAGCTTTCTGCTTTCCAGAATGTGGTTTATTCATG
TGGTCTTCTAGATCCGGGCTTTGTTGGGGATCATTTTACTTGGTGTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTTGTCTGAGGATAGATCGGTCGCTCAAAGAGATTTCCGATTGCAGGATTAAGAGGGGAAAGTGTTCCGGTGTCCAGTATTGTATGAGCGTATTCCAGACTTT
TGTTATGAGTGTGGTTGTTTGGGGCATTCGAGAAGGGAGTGCGGGGTTGTTGGGGAAGGTGTATTGGAGTAGGGGTGAGCAATATGGTGAATGGTTGAGAGCAGGGGTGG
GGTTAGGTGAGGTTAGGCGGTGGGTTCAGGAGGGAGGGCCGAAAAGTGTGGCAAACCGAGTGTCTGAGAAGCCTAAGCCTTCTTCTGATGGTGTAGGTGCAGTAGGGAGT
GGGGCGAGTCTGGTGAATAAGGAGGAGGGAAAGCAGAAAGTTGGGAGTGTTTTGGTAGAAAATGGACTCGCTGAAGGAGGTGAGGATGTGTTGCTGGTTGATGCTGAGGG
GCATGCAGGTCAAGGCGGCAGAGACAATGGGGAGAGATGTCTTCTGCGAAACGTTTGCTGGGTTTTGACCATTGCTTTTGTGTTGATTGTCATGGACGGAGTGATCGTAT
GGGATGATTGTCGGTGGCGGCTCACTGGTTTCTATGGTTTCCCTTCAGCGGATCAACGTTCTCAGACATGGTCCCTTCTCTCTAGATTGAGAGGTTGTGTGGATACGCCC
TGGCTGATTGGAGGTGATTTTAATGCAATCTTATGTCAGGATGAGAAGGATGGGGGTAGGGATAAGCCATTGGCTGAGCTTTCTGCTTTCCAGAATGTGGTTTATTCATG
TGGTCTTCTAGATCCGGGCTTTGTTGGGGATCATTTTACTTGGTGTAAATAG
Protein sequenceShow/hide protein sequence
MRVCLRIDRSLKEISDCRIKRGKCSGVQYCMSVFQTFVMSVVVWGIREGSAGLLGKVYWSRGEQYGEWLRAGVGLGEVRRWVQEGGPKSVANRVSEKPKPSSDGVGAVGS
GASLVNKEEGKQKVGSVLVENGLAEGGEDVLLVDAEGHAGQGGRDNGERCLLRNVCWVLTIAFVLIVMDGVIVWDDCRWRLTGFYGFPSADQRSQTWSLLSRLRGCVDTP
WLIGGDFNAILCQDEKDGGRDKPLAELSAFQNVVYSCGLLDPGFVGDHFTWCK