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Lag0007683 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007683
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr9:3036030..3036377
RNA-Seq ExpressionLag0007683
SyntenyLag0007683
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041883.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.7e-2354.84Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSE-QAKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIET---------PAVKNN
        IW Q+++  +G +V++ENP  D   S SE  ++E ++P++MSVM+ D+ T E RM ELE+KV+MLMK +EERDYEIASLKN+IE+           VKN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSE-QAKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIET---------PAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        DK K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]4.5e-2354.03Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN
        IW Q+++  +G +V++ENP  D   S SE++ +E   P++MSVM+ D+ T E+RMAELE+KV+MLMKA+EERD+EIA LKN+IE         T  +KN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        +K K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

KAA0050518.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.0e-2253.23Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN
        IW Q+++  +G +V++ENP  D   S SE++ +E   P++MSVM+ D+ T E+RMAELE+KV+MLMKA+EE+D+EIA LKN+IE         T  +KN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        +K K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

KAA0051994.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-2354.84Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN
        IW Q+++  +G +V++ENP  D   S SE++ +E   P++MSVM+ D+ T E+RMAELE+KV+MLMKA+EERD+EIASLKN+IE         T  +KN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        +K K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

TYK19797.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.5e-2354.03Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQ-AKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIET---------PAVKNN
        IW Q+++  +G +V++ENP+ D   SSS+  ++E  +P++MS+M+ D+ T E RMAELE+KV+MLMK +EERDYEIA LKN+IE+           VKN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQ-AKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIET---------PAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        DK K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H2.2e-2354.03Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN
        IW Q+++  +G +V++ENP  D   S SE++ +E   P++MSVM+ D+ T E+RMAELE+KV+MLMKA+EERD+EIA LKN+IE         T  +KN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        +K K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

A0A5A7U5H1 Ty3-gypsy retrotransposon protein4.9e-2353.23Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN
        IW Q+++  +G +V++ENP  D   S SE++ +E   P++MSVM+ D+ T E+RMAELE+KV+MLMKA+EE+D+EIA LKN+IE         T  +KN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        +K K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

A0A5A7U9H0 Ty3-gypsy retrotransposon protein7.6e-2454.84Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN
        IW Q+++  +G +V++ENP  D   S SE++ +E   P++MSVM+ D+ T E+RMAELE+KV+MLMKA+EERD+EIASLKN+IE         T  +KN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQA-KETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIE---------TPAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        +K K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

A0A5D3C4W1 Ty3-gypsy retrotransposon protein1.3e-2354.84Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSE-QAKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIET---------PAVKNN
        IW Q+++  +G +V++ENP  D   S SE  ++E ++P++MSVM+ D+ T E RM ELE+KV+MLMK +EERDYEIASLKN+IE+           VKN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSE-QAKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIET---------PAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        DK K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

A0A5D3D8A2 Ty3-gypsy retrotransposon protein2.2e-2354.03Show/hide
Query:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQ-AKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIET---------PAVKNN
        IW Q+++  +G +V++ENP+ D   SSS+  ++E  +P++MS+M+ D+ T E RMAELE+KV+MLMK +EERDYEIA LKN+IE+           VKN 
Subjt:  IWTQMAEKNQGEMVMQENPLFDYSTSSSEQ-AKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIET---------PAVKNN

Query:  DKRKDFMQENQPQHSTSIASLSVQ
        DK K  MQE+QPQ+STSIASLSVQ
Subjt:  DKRKDFMQENQPQHSTSIASLSVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATGGACTCAAATGGCAGAGAAAAACCAAGGCGAAATGGTCATGCAAGAAAATCCTTTATTTGACTATTCTACTTCATCTTCTGAGCAGGCAAAGGAGACATCAAA
TCCTGACGTGATGTCTGTAATGATGGCTGACATAGGTACAGGCGAAGAAAGAATGGCTGAATTGGAAAGAAAAGTCAGCATGTTGATGAAGGCGATTGAGGAGAGAGATT
ATGAAATTGCATCTCTGAAGAATTACATAGAAACACCCGCTGTAAAGAATAATGACAAAAGGAAGGATTTCATGCAAGAAAACCAACCTCAACATTCCACTTCAATTGCT
TCGTTGTCCGTTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATATGGACTCAAATGGCAGAGAAAAACCAAGGCGAAATGGTCATGCAAGAAAATCCTTTATTTGACTATTCTACTTCATCTTCTGAGCAGGCAAAGGAGACATCAAA
TCCTGACGTGATGTCTGTAATGATGGCTGACATAGGTACAGGCGAAGAAAGAATGGCTGAATTGGAAAGAAAAGTCAGCATGTTGATGAAGGCGATTGAGGAGAGAGATT
ATGAAATTGCATCTCTGAAGAATTACATAGAAACACCCGCTGTAAAGAATAATGACAAAAGGAAGGATTTCATGCAAGAAAACCAACCTCAACATTCCACTTCAATTGCT
TCGTTGTCCGTTCAGTAG
Protein sequenceShow/hide protein sequence
MIWTQMAEKNQGEMVMQENPLFDYSTSSSEQAKETSNPDVMSVMMADIGTGEERMAELERKVSMLMKAIEERDYEIASLKNYIETPAVKNNDKRKDFMQENQPQHSTSIA
SLSVQ