CuGenDBv2

Gene ID	Lag0007703
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr9:3311755..3313230
RNA-Seq Expression	Lag0007703
Synteny	Lag0007703
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR026960 - Reverse transcriptase zinc-binding domain IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]

1.5e-78

34.8

Show/hide

Query:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS
        +E FNQALL KQ W+++   +SL +R  R +Y PS  FL A++G +PS+IWRS+ WG+ELL+KGLRW++G G  + VY   W+P  +  ++ S P LP+S
Subjt:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS

Query:  TRVCDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNM-IQWWNRFWQMQLPSKIKIF
        T VCDL   SG WN P +   F  +E +  L +        D  IWHYE+ G Y+VKSGYR+A + K + S   S + ++  ++W + W +++P+KIK F
Subjt:  TRVCDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNM-IQWWNRFWQMQLPSKIKIF

Query:  LWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQR
        LWR   + LP    L  R +     C  C R+ E V H  W C+ A   W  S +  +       +  +L   LQ  +  E     A L W LWNRRN  
Subjt:  LWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQR

Query:  VVGGGHISSASQCPATWAADYYQVYKSAQ----AKSLSLHSPHVVRSNIR-----WVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFF
         +  G   +A+Q         +++ K AQ    A +LS H+ H  +S+ +     W PPP G YK+N DGA +      G GV++R++ G  M + +R  
Subjt:  VVGGGHISSASQCPATWAADYYQVYKSAQ----AKSLSLHSPHVVRSNIR-----WVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFF

Query:  PYCGSSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME
             +  TE +AT  G   A +MGF   +LE+D++     +          G ++E V   +    +  C +T R GN+ AH LA  A    +   W+E
Subjt:  PYCGSSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]

1.5e-102

40.89

Show/hide

Query:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS
        +ELFN+ALL KQ W+++N  +S+ SR L+G+YF    F+ A++  +PSYIWRSILWGR+LL KGLRW+IG G+ V +Y  NW+P    L++ S P LP+ 
Subjt:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS

Query:  TRVCDL-RLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVK-LQSSPSSSSKSNMIQWWNRFWQMQLPSKIKI
        +RV  L     GGW    +   F  +EA  IL +  G G   D+ IW+YEKTG Y+V+SGY+VA++      +PSSSS   +  WWN FW+M +P+KIK+
Subjt:  TRVCDL-RLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVK-LQSSPSSSSKSNMIQWWNRFWQMQLPSKIKI

Query:  FLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQ
        FLWRLCL+RLPT  NL +RGV+I N C FCGR  ED  H+FW CK+A   W  SKF  L+  L      + +           FEE  V++W LWN+RN 
Subjt:  FLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQ

Query:  RVVGGG--HISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSS
        R        +         WA  Y   ++  +AKS  +       + I W PP EG YK+N D +F  S   +G G+II + RG+VM +A ++     S 
Subjt:  RVVGGG--HISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSS

Query:  DLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME
        D+ E +A   G  LA E+G  P                 + D+SE G ++   K     S      F  REGN+AAH+LA  AL L +   WME
Subjt:  DLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]

1.6e-77

34.21

Show/hide

Query:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV
        FNQAL+ KQGW+++    SL +R L+ +YF    F+ A LG  PS++WRSI+WGR++LHKG RW+IG G+ V VY  NWIPR    +  S PS+   T V
Subjt:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV

Query:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL
         +L      W    I QHF  E+A  I+ +        DQ IWHY+K G+Y+VKSGY+VA+ +K    PS S+    +  W   W++ +P K+KIFLWR 
Subjt:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL

Query:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQC----HTKWEAFEECAVLLWALWNRRNQR
          + LPT  NL ++ V     C  C    E V H    C  A + W   ++S L   L      D++WMLQ     H K E   E A LLWA+W  RN+ 
Subjt:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQC----HTKWEAFEECAVLLWALWNRRNQR

Query:  VVGGGHISSASQCPATWAAD---YYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSS
        +  G       + P    A+     + +K  +   +   +        +W PPP G  KVN D A    +  +G GV++RDS G    +A++     GS 
Subjt:  VVGGGHISSASQCPATWAAD---YYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSS

Query:  DLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME
         + E  A  +G  +A +      I E DS  V  ++  +   ++E+G ++  ++  +    +F+   + R+ N AAH LA  AL  +++  W++
Subjt:  DLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]

4.9e-74

32.52

Show/hide

Query:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV
        FNQAL+ KQ W+L+   +SL SR L+ +YF +  FLCA+ G + SYIWRSI+WGR+++ KG+RW+IG G+ ++++  NW+PR    +     SLPVS+ V
Subjt:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV

Query:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL
         DL      W+   + QHF   +   IL +     +  D+ +WHY+K G+Y+VKSGY++A+  K   S S +  S+  ++W+  W ++LP K+KIF+WR 
Subjt:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL

Query:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQRVVGG
          N LP+  NL +R V     C  C    E + H    CK A + W QS FS      + +  F  +  +    +    E    L W+ W  RN+ +  G
Subjt:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQRVVGG

Query:  GHIS---SASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTE
          ++   SA++  +   A  +Q  +  Q   +S+    +      W+PPP+  +KVN D AF   +  +G G +IRDS G+++ + +      GS+ L E
Subjt:  GHIS---SASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTE

Query:  GLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWM
          A  +G  LA       +I+E D   V Q+V       SE+   + A++ ++            R  N  AH LA  AL       W+
Subjt:  GLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWM

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]

4.9e-74

33.81

Show/hide

Query:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV
        FNQALL KQGW++    DSL +R L+ +YF S +FL A++G +PSYIWRSILWGR+++  G RW+IG G+ V ++  NWIP+    +   +P++P    V
Subjt:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV

Query:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL
         +L      W+   I++HF++ +A++I  +        D+ IWH+ K+G YTVKSGY+ A+ ++  + PSSS  S     WN  W + LP KI+IF+WR 
Subjt:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL

Query:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQRVVGG
          N LP+  NL +R +     C  C    E+VFH    CK A + W  S F +       +    L+  ++        +  AV+LWA WN RNQ +  G
Subjt:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQRVVGG

Query:  GHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTEGLA
               Q     A    + YK  Q  +   H      + + W PP EG  K+N D A       +G G +IRD  G+V  +A++   + GS    E  A
Subjt:  GHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTEGLA

Query:  TTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQW
          +G  +A +     VI+E DS+ V  +V       SE+  V+  ++          C +T R  N  AH L   AL   ++  W
Subjt:  TTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQW

TrEMBL top hits

e value

%identity

Alignment

A0A1S8AC01 Ribonuclease H-like superfamily protein

2.4e-74

34.67

Show/hide

Query:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV
        FNQAL+ KQGW+L+   DSL +R L  KYF   DFL A+LG +PS+IWRSI+WGR+++  G RW+IG+G+ V +Y  +WIPR +  +  SRP+LP ++ V
Subjt:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV

Query:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL
          L      W+   I+ HF++ +A+ I+ +        DQ +WHY+K G Y+VKSGY+VA+ +K  + PSSS   N    W   W + LP K++IF+WR 
Subjt:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL

Query:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQ---CHTKWEAFEECAVLLWALWNRRNQRV
          N LP+  NL +R V     C  C    E +FH    CK A + W  ++F+     L  E   DL+ +L+   C  +    E    + W +W+ RNQ +
Subjt:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQ---CHTKWEAFEECAVLLWALWNRRNQRV

Query:  VGGGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTE
                  Q     A    + YK     +         ++   W PP  G +K+N D A       SG GV+IR++ G V+ +A+    +CG     E
Subjt:  VGGGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTE

Query:  GLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVK
          A  FG  +AG      +I+E DS+ V   V  +   + E+  V+ A++
Subjt:  GLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVK

A0A1S8ACU2 Ribonuclease H-like superfamily protein

1.5e-76

33.74

Show/hide

Query:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV
        FNQAL+ KQ W++I   +SL ++ L+ KYF   DFL A+LG  PS++WRSI+WGR+++  G+RW+IG G+ V +Y ++WIPR    +  S P+L +   V
Subjt:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRV

Query:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL
         +L   +  W    I QHF  E+A +I  +Q       DQ +WHY+K G+Y+VKSGY++A+ +K  + PSSSS SN+ Q WN  W ++LP KIKIF+W+ 
Subjt:  CDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRL

Query:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLL---WALWNRRNQRV
          N LPT  NL +R +     C  C  + ED+ H    CK A + W   K +     +      DL+ MLQ      + +E  +++   W  W+ RN  V
Subjt:  CLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLL---WALWNRRNQRV

Query:  VGGGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTE
                  Q     A    + Y   +   +   +  +     +W+PPP+G +K N D A        G GV+IRD  G ++++A+    Y G     E
Subjt:  VGGGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTE

Query:  GLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAG-SSSFRCGFTLREGNEAAHLLASSALTLRDSDQW
          A  FG  +  E    P+ILE D + V   V       +E+   +  ++ ++   +S        R  N  AH LA  AL  R+S  W
Subjt:  GLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAG-SSSFRCGFTLREGNEAAHLLASSALTLRDSDQW

A0A5E4FZN9 PREDICTED: retrotransposon

7.1e-79

34.8

Show/hide

Query:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS
        +E FNQALL KQ W+++   +SL +R  R +Y PS  FL A++G +PS+IWRS+ WG+ELL+KGLRW++G G  + VY   W+P  +  ++ S P LP+S
Subjt:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS

Query:  TRVCDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNM-IQWWNRFWQMQLPSKIKIF
        T VCDL   SG WN P +   F  +E +  L +        D  IWHYE+ G Y+VKSGYR+A + K + S   S + ++  ++W + W +++P+KIK F
Subjt:  TRVCDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNM-IQWWNRFWQMQLPSKIKIF

Query:  LWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQR
        LWR   + LP    L  R +     C  C R+ E V H  W C+ A   W  S +  +       +  +L   LQ  +  E     A L W LWNRRN  
Subjt:  LWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQR

Query:  VVGGGHISSASQCPATWAADYYQVYKSAQ----AKSLSLHSPHVVRSNIR-----WVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFF
         +  G   +A+Q         +++ K AQ    A +LS H+ H  +S+ +     W PPP G YK+N DGA +      G GV++R++ G  M + +R  
Subjt:  VVGGGHISSASQCPATWAADYYQVYKSAQ----AKSLSLHSPHVVRSNIR-----WVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFF

Query:  PYCGSSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME
             +  TE +AT  G   A +MGF   +LE+D++     +          G ++E V   +    +  C +T R GN+ AH LA  A    +   W+E
Subjt:  PYCGSSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME

A0A6J1DAR4 uncharacterized protein LOC111018954

7.0e-103

40.89

Show/hide

Query:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS
        +ELFN+ALL KQ W+++N  +S+ SR L+G+YF    F+ A++  +PSYIWRSILWGR+LL KGLRW+IG G+ V +Y  NW+P    L++ S P LP+ 
Subjt:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS

Query:  TRVCDL-RLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVK-LQSSPSSSSKSNMIQWWNRFWQMQLPSKIKI
        +RV  L     GGW    +   F  +EA  IL +  G G   D+ IW+YEKTG Y+V+SGY+VA++      +PSSSS   +  WWN FW+M +P+KIK+
Subjt:  TRVCDL-RLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVK-LQSSPSSSSKSNMIQWWNRFWQMQLPSKIKI

Query:  FLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQ
        FLWRLCL+RLPT  NL +RGV+I N C FCGR  ED  H+FW CK+A   W  SKF  L+  L      + +           FEE  V++W LWN+RN 
Subjt:  FLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQ

Query:  RVVGGG--HISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSS
        R        +         WA  Y   ++  +AKS  +       + I W PP EG YK+N D +F  S   +G G+II + RG+VM +A ++     S 
Subjt:  RVVGGG--HISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSS

Query:  DLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME
        D+ E +A   G  LA E+G  P                 + D+SE G ++   K     S      F  REGN+AAH+LA  AL L +   WME
Subjt:  DLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)

5.8e-73

33.47

Show/hide

Query:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS
        +E FNQALL KQ W+++   +SL +R  R +Y PS  FL A++G +PS+IWRS+ WG+ELL+KGLRW++G G  + VY   W+P  +  ++ S P LP+S
Subjt:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVS

Query:  TRVCDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNM-IQWWNRFWQMQLPSKIKIF
        TRVCDL   SG WN P +   F  +E + IL +        D  IWHYE+ G Y+VKSGYR+A + K + S   S++ ++  ++W + W +++P+KIK F
Subjt:  TRVCDLRLPSGGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNM-IQWWNRFWQMQLPSKIKIF

Query:  LWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQR
        LWR   + LP    L  R +     C  C R+ E V H  W C+ A   W  S +  +       +  +L   LQ  +  E     A L W LWNRRN  
Subjt:  LWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQR

Query:  VVGGGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIR-----WVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCG
        +  G      S+      +   ++ +     +  LH+ H  +S+ +     W PPP          A +      G GV++R++ G  M + +R      
Subjt:  VVGGGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIR-----WVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCG

Query:  SSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME
         +  TE +AT  G   A +MGF   ILE+D++     +          G +LE V   +    +  C +T R GN+ AH LA  A    +   W+E
Subjt:  SSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWME

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

3.4e-30

Show/hide

Query:  NQALLGKQGWKLINESDSLFSRTLRGKY-----------FPSGDFLCAQLGCSPSYIWRSILWG-RELLHKGLRWKIGRGEMVSVYDTNWI------PRD
        N+AL+ K GW+L+ E +SL++  L+ KY            P G +         S  WRSI  G R+++  G+ W  G G+ +  +   W+        D
Subjt:  NQALLGKQGWKLINESDSLFSRTLRGKY-----------FPSGDFLCAQLGCSPSYIWRSILWG-RELLHKGLRWKIGRGEMVSVYDTNWI------PRD

Query:  NGLQVRSRPSLPVSTRVCDLRLPSGGWN----RPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQ
        NG     RP+   +    DL +P  GW+     P+   +   E   ++L L  G     D+  W + + G ++V+S Y    M+ +   P    + NM  
Subjt:  NGLQVRSRPSLPVSTRVCDLRLPSGGWN----RPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQ

Query:  WWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAW-------------NQSKFSMLTGRLHFET-CFD
        ++N  W++++P ++K FLW +    + T+    +R +   N C  C    E + HV   C   +  W             ++S F  L   L   + C D
Subjt:  WWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAW-------------NQSKFSMLTGRLHFET-CFD

Query:  LIWMLQCHTKWEAFEECAVLLWALWNRRNQRVVG-GGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSY
        + W              AV++W  W  R   + G         +    WA + Y+ +       + +  P V R  I WV P  G  KVN DGA RG+  
Subjt:  LIWMLQCHTKWEAFEECAVLLWALWNRRNQRVVG-GGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSY

Query:  GSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTEGLATT---------FGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSS
         + AG ++RD  G           +CG   L  G  +          +G   A E     V LEVDS  +   ++  I D   L  ++      +     
Subjt:  GSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTEGLATT---------FGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSS

Query:  FRCGFTLREGNEAAHLLASSALTL
         R     RE N  A  LA+ A +L
Subjt:  FRCGFTLREGNEAAHLLASSALTL

P93295 Uncharacterized mitochondrial protein AtMg00310

3.4e-14

47.5

Show/hide

Query:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWI
        FNQALL KQ +++I++  +L SR LR +YFP    +   +G  PSY WRSI+ GRELL +GL   IG G    V+   WI
Subjt:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWI

Arabidopsis top hits

e value

%identity

Alignment

AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

7.1e-07

26.4

Show/hide

Query:  KSNMIQWWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLI-WMLQC
        +S+++ W    W      K    +W   L+RLPTK  L   G+ +   C  C    ED  H+F  C++A   W+     +      F    DL+ W LQ 
Subjt:  KSNMIQWWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLI-WMLQC

Query:  HTKWEAFEECAV---LLWALWNRRN
        + +        +   +L+A+W +RN
Subjt:  HTKWEAFEECAV---LLWALWNRRN

AT3G09510.1 Ribonuclease H-like superfamily protein

4.8e-35

26.81

Show/hide

Query:  LRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTR-------VCDLRLPSGG---WNRPF
        ++ +YF     L A++    SY W S+L G  LL KG R  IG G+ +       I  DN   V S P  P++T        + +L    G    W+   
Subjt:  LRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTR-------VCDLRLPSGG---WNRPF

Query:  IFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQR
        I Q  +Q +   I  +     +  D+ IW+Y  TG YTV+SGY +       + P+ +     I    R W + +  K+K FLWR     L T   L  R
Subjt:  IFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQR

Query:  GVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRL---HFETCFDLIWMLQCHTKWEAFEEC--AVLLWALWNRRNQRVVGGGHISSASQC
        G+ I   C  C R +E + H  + C +A  AW  S  S++  +L    FE     I      T    F +     L+W +W  RN  VV      S S+ 
Subjt:  GVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRL---HFETCFDLIWMLQCHTKWEAFEEC--AVLLWALWNRRNQRVVGGGHISSASQC

Query:  PATWAADYYQVYKSAQA-KSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTEGLATTFGCTLA
          +  A+ +    + Q+ K     +  +  + I W  PP    K N D  F      +  G IIR+  G  +        +  +    E  A        
Subjt:  PATWAADYYQVYKSAQA-KSLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTEGLATTFGCTLA

Query:  GEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALT
           G+  V +E D + +  ++ G I   S L + LE +       +S + GF  R+GN+ AH+LA    T
Subjt:  GEMGFCPVILEVDSRRVYQIVQGEIPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALT

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.0e-05

32.31

Show/hide

Query:  WWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVR
        W    W +++  KIK+ +W+   N LP    L+ R + I  FC  C R  E + H+ + C +A R
Subjt:  WWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVR

AT4G29090.1 Ribonuclease H-like superfamily protein

5.2e-50

28.57

Show/hide

Query:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWI---PRDNGLQVRSRP--
        +E FN ALLGKQ W++++  +SL ++  + +YF   D L A LG  PS++W+SI   +E+L +G R  +G GE + ++   W+   P    L+++  P  
Subjt:  MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWI---PRDNGLQVRSRP--

Query:  ---SLPVSTRVCDLRLPSG-GWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAV-MVKLQSSPSSSSKSNMIQWWNRFWQM
           S+    +V DL   SG  W +  I   F + E  +I  L+ G  ++ D   W Y  +G YTVKSGY V   ++  +SSP   S+ ++   + + W+ 
Subjt:  ---SLPVSTRVCDLRLPSG-GWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAV-MVKLQSSPSSSSKSNMIQWWNRFWQM

Query:  QLPSKIKIFLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCF-DLIWMLQC---HTKWE-AFEEC
        Q   KI+ FLW+   N LP    L  R +   + C+ C    E V H+ + C +A   W  S   +  G    ++ + +L W+      + +WE A +  
Subjt:  QLPSKIKIFLWRLCLNRLPTKVNLIQRGVDIPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCF-DLIWMLQC---HTKWE-AFEEC

Query:  AVLLWALWNRRNQRVVGGGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNI-RWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVML
          LLW LW  RN+ V  G   +  +Q     A D  + ++           P V RS+  RW PPP    K N D  +   +   G G ++R+ +G V  
Subjt:  AVLLWALWNRRNQRVVGGGHISSASQCPATWAADYYQVYKSAQAKSLSLHSPHVVRSNI-RWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVML

Query:  SAMRFFPYCGSSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGE---------IPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLL
           R  P   S    E  A  +         +  VI E DS+ + +I+  +         I D+  L S    VK            F  REGN  A  +
Subjt:  SAMRFFPYCGSSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGE---------IPDISELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLL

Query:  ASSALTLRDSD
        A  +L+  + D
Subjt:  ASSALTLRDSD

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.5e-15

47.5

Show/hide

Query:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWI
        FNQALL KQ +++I++  +L SR LR +YFP    +   +G  PSY WRSI+ GRELL +GL   IG G    V+   WI
Subjt:  FNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAATTATTCAATCAAGCACTTTTAGGGAAACAAGGGTGGAAATTGATAAATGAGTCGGACTCTCTTTTCTCTCGAACTCTTCGAGGAAAGTACTTCCCTTCGGGTGA
TTTCCTGTGTGCTCAGCTGGGTTGCTCGCCTTCATATATTTGGCGTAGTATTTTATGGGGGAGGGAGCTGCTTCACAAAGGGTTGCGGTGGAAAATTGGGCGTGGTGAGA
TGGTTTCTGTGTATGACACGAACTGGATTCCGAGGGATAATGGTTTACAGGTGCGTTCGCGACCGTCCTTGCCTGTTTCAACTCGAGTCTGTGACCTGCGGCTTCCCTCA
GGGGGTTGGAATCGCCCTTTCATTTTCCAACACTTTGAGCAGGAAGAAGCAAATATTATTTTGGGTCTTCAGAAGGGGTATGGGCAGGTTGCAGATCAACAAATCTGGCA
TTACGAGAAAACTGGTCATTATACGGTCAAGAGTGGATATCGGGTGGCGGTAATGGTTAAATTGCAGTCGTCTCCCTCGTCATCTTCCAAGTCAAATATGATTCAATGGT
GGAATCGGTTCTGGCAAATGCAACTTCCCTCTAAAATTAAAATATTCCTGTGGCGCCTCTGTCTCAATCGACTCCCAACTAAGGTCAATCTGATTCAGAGAGGGGTAGAC
ATCCCAAATTTCTGTTTGTTCTGTGGGAGGAGGGATGAAGATGTGTTTCACGTTTTCTGGTACTGTAAGTACGCGGTGAGGGCCTGGAATCAATCAAAGTTTTCGATGCT
GACTGGAAGGCTTCATTTTGAAACTTGTTTTGATCTCATCTGGATGCTCCAGTGTCATACCAAGTGGGAGGCTTTTGAGGAATGTGCAGTGCTTTTGTGGGCCTTGTGGA
ACCGCCGAAATCAGAGAGTAGTTGGGGGAGGGCATATCTCGTCTGCCTCGCAGTGTCCGGCGACGTGGGCGGCGGATTACTACCAAGTGTATAAGTCTGCTCAGGCCAAG
AGTTTAAGTTTGCATTCTCCTCACGTGGTTCGTTCGAATATTCGGTGGGTTCCACCTCCGGAGGGGACTTATAAAGTAAACTGTGATGGGGCATTTCGAGGGTCTTCGTA
TGGTTCAGGAGCAGGGGTGATTATTCGAGATAGCCGAGGTCGAGTGATGCTGTCGGCAATGAGGTTCTTTCCTTATTGTGGTTCGTCTGATTTGACTGAAGGACTGGCGA
CGACATTCGGATGTACCCTTGCCGGGGAAATGGGATTCTGTCCAGTTATTCTAGAGGTTGATTCTCGGCGTGTTTATCAAATTGTGCAGGGTGAGATCCCGGATATTTCT
GAATTGGGGTCGGTGCTAGAAGCGGTTAAGATCAGGGTGGCTGGCTCGTCGTCGTTCCGGTGTGGCTTTACTCTTCGGGAGGGCAATGAAGCGGCACATCTCTTGGCGTC
TTCAGCTTTGACTTTGCGAGATTCTGATCAGTGGATGGAAGCGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MELFNQALLGKQGWKLINESDSLFSRTLRGKYFPSGDFLCAQLGCSPSYIWRSILWGRELLHKGLRWKIGRGEMVSVYDTNWIPRDNGLQVRSRPSLPVSTRVCDLRLPS
GGWNRPFIFQHFEQEEANIILGLQKGYGQVADQQIWHYEKTGHYTVKSGYRVAVMVKLQSSPSSSSKSNMIQWWNRFWQMQLPSKIKIFLWRLCLNRLPTKVNLIQRGVD
IPNFCLFCGRRDEDVFHVFWYCKYAVRAWNQSKFSMLTGRLHFETCFDLIWMLQCHTKWEAFEECAVLLWALWNRRNQRVVGGGHISSASQCPATWAADYYQVYKSAQAK
SLSLHSPHVVRSNIRWVPPPEGTYKVNCDGAFRGSSYGSGAGVIIRDSRGRVMLSAMRFFPYCGSSDLTEGLATTFGCTLAGEMGFCPVILEVDSRRVYQIVQGEIPDIS
ELGSVLEAVKIRVAGSSSFRCGFTLREGNEAAHLLASSALTLRDSDQWMEA

Lag0007703 (gene) of Sponge gourd (AG-4) v1 genome