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Lag0007731 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007731
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:3962086..3963145
RNA-Seq ExpressionLag0007731
SyntenyLag0007731
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017258036.1 PREDICTED: uncharacterized protein LOC108227417 isoform X1 [Daucus carota subsp. sativus]5.0e-0836.47Show/hide
Query:  TFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQK-HNSSLQYDKSLRYGG
        T   + +R RV +D ++ L RG  +NLD   +  W+  RY++L + CSFCG I H+ ++C+   + +++ HN +LQY  SL+  G
Subjt:  TFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQK-HNSSLQYDKSLRYGG

XP_017258051.1 PREDICTED: uncharacterized protein LOC108227417 isoform X3 [Daucus carota subsp. sativus]5.0e-0836.47Show/hide
Query:  TFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQK-HNSSLQYDKSLRYGG
        T   + +R RV +D ++ L RG  +NLD   +  W+  RY++L + CSFCG I H+ ++C+   + +++ HN +LQY  SL+  G
Subjt:  TFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQK-HNSSLQYDKSLRYGG

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.0e-1247.56Show/hide
Query:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNSSLQYDKSLRYGG
        WG+ LRVRV  DV + L RGIK+NLDGPM G WIPI+Y++L +    CG + H+ ++CS     V   + +LQY   LR+ G
Subjt:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNSSLQYDKSLRYGG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.7e-1944.25Show/hide
Query:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHN-SSLQYDKSLRY-----GGKGGLLARSPVKD
        WGASLR+RV ID+++ LRRGIKIN+DGPM G WIPI+Y++L + C FCG+IGH S +C   Y   Q  + ++ +Y   LR+     G + G   +SP ++
Subjt:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHN-SSLQYDKSLRY-----GGKGGLLARSPVKD

Query:  SNAGTNSFRTLDR
         + G++S  + +R
Subjt:  SNAGTNSFRTLDR

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.4e-1150Show/hide
Query:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNSSLQYDKSLRYGG
        WG++LRVRV +D+S+ LRRGIK+NLDGP+ G+WIPI+Y++L + C  CGL    SR         +KH    QY   LRY G
Subjt:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNSSLQYDKSLRYGG

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054819.6e-1347.56Show/hide
Query:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNSSLQYDKSLRYGG
        WG+ LRVRV  DV + L RGIK+NLDGPM G WIPI+Y++L +    CG + H+ ++CS     V   + +LQY   LR+ G
Subjt:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNSSLQYDKSLRYGG

A0A6J1DU55 uncharacterized protein LOC1110231358.1e-2044.25Show/hide
Query:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHN-SSLQYDKSLRY-----GGKGGLLARSPVKD
        WGASLR+RV ID+++ LRRGIKIN+DGPM G WIPI+Y++L + C FCG+IGH S +C   Y   Q  + ++ +Y   LR+     G + G   +SP ++
Subjt:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHN-SSLQYDKSLRY-----GGKGGLLARSPVKD

Query:  SNAGTNSFRTLDR
         + G++S  + +R
Subjt:  SNAGTNSFRTLDR

A0A6J1DX30 uncharacterized protein LOC1110248743.1e-1150Show/hide
Query:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNSSLQYDKSLRYGG
        WG++LRVRV +D+S+ LRRGIK+NLDGP+ G+WIPI+Y++L + C  CGL    SR         +KH    QY   LRY G
Subjt:  WGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNSSLQYDKSLRYGG

A0A7J6HKV1 Uncharacterized protein3.2e-0836.78Show/hide
Query:  TFSFATFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNS--SLQYDKSL
        T S    WG  LRVR+EIDV++ L RG   +  G  +  W+  R++ LL+ C FCG + H+   C +F       ++   LQYD +L
Subjt:  TFSFATFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNS--SLQYDKSL

A0A803NHU1 Uncharacterized protein3.2e-0836.78Show/hide
Query:  TFSFATFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNS--SLQYDKSL
        T S    WG  LRVR+EIDV++ L RG   +  G  +  W+  R++ LL+ C FCG + H+   C +F       ++   LQYD +L
Subjt:  TFSFATFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKHNS--SLQYDKSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAATGCACATGATTTATCATGTGAAGCAAGGGCGTTAGCTTTTGAGAAATCATTGCTGATTCTGGAATTCCCGATTCGTGTCCAAAAGCCATCCGATTACACATT
CTCTTTTGCAACGTTTTGGGGAGCAAGCCTACGTGTGCGTGTTGAAATCGATGTATCTCGACTGTTGAGAAGGGGAATCAAGATTAATCTAGATGGCCCGATGAACGGTA
GCTGGATCCCAATCCGCTATAAAAAGTTACTGGAGCTTTGCTCTTTCTGTGGATTAATTGGTCATGTCTCTAGGGAATGCAGTCAATTTTACAAATATGTTCAAAAGCAT
AACTCTTCTCTACAGTACGACAAATCGCTTCGTTATGGTGGCAAAGGTGGGTTGCTTGCTCGATCACCAGTAAAGGACTCCAATGCTGGAACAAATTCGTTTAGGACACT
AGATCGGATTTGGAGTTCCATCTCTCTATGGCTATGGATACCAAAACCTCAAATGATTCGCCAGTGTAGGCTGCTCCACATTTTCCTTTTGATCAAAGACGGAGAAGCCT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTGCAATGCACATGATTTATCATGTGAAGCAAGGGCGTTAGCTTTTGAGAAATCATTGCTGATTCTGGAATTCCCGATTCGTGTCCAAAAGCCATCCGATTACACATT
CTCTTTTGCAACGTTTTGGGGAGCAAGCCTACGTGTGCGTGTTGAAATCGATGTATCTCGACTGTTGAGAAGGGGAATCAAGATTAATCTAGATGGCCCGATGAACGGTA
GCTGGATCCCAATCCGCTATAAAAAGTTACTGGAGCTTTGCTCTTTCTGTGGATTAATTGGTCATGTCTCTAGGGAATGCAGTCAATTTTACAAATATGTTCAAAAGCAT
AACTCTTCTCTACAGTACGACAAATCGCTTCGTTATGGTGGCAAAGGTGGGTTGCTTGCTCGATCACCAGTAAAGGACTCCAATGCTGGAACAAATTCGTTTAGGACACT
AGATCGGATTTGGAGTTCCATCTCTCTATGGCTATGGATACCAAAACCTCAAATGATTCGCCAGTGTAGGCTGCTCCACATTTTCCTTTTGATCAAAGACGGAGAAGCCT
AG
Protein sequenceShow/hide protein sequence
MCNAHDLSCEARALAFEKSLLILEFPIRVQKPSDYTFSFATFWGASLRVRVEIDVSRLLRRGIKINLDGPMNGSWIPIRYKKLLELCSFCGLIGHVSRECSQFYKYVQKH
NSSLQYDKSLRYGGKGGLLARSPVKDSNAGTNSFRTLDRIWSSISLWLWIPKPQMIRQCRLLHIFLLIKDGEA