; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007742 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007742
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr9:4152681..4153022
RNA-Seq ExpressionLag0007742
SyntenyLag0007742
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]2.5e-0538.74Show/hide
Query:  VADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLND
        VAD T    P+ + Q   P+P  + P +R  AE  M Q+TTYN LYDILVGQY  P  K  Q  QIP            ++ +  PE    P  V NL  
Subjt:  VADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLND

Query:  PEVKKELVAPS
          VK + V  S
Subjt:  PEVKKELVAPS
XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]3.2e-0535.51Show/hide
Query:  ADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLNDP
        AD      PI  PQ   P+P  + P +R  AE  MPQ+TTYN LYD+ +GQY     K  Q  QIP            ++ +  PE    P  V NL   
Subjt:  ADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLNDP

Query:  EVKKELV
          K + V
Subjt:  EVKKELV
TrEMBL top hitse value%identityAlignment
A0A6J1D7T3 uncharacterized protein LOC1110178121.2e-0538.74Show/hide
Query:  VADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLND
        VAD T    P+ + Q   P+P  + P +R  AE  M Q+TTYN LYDILVGQY  P  K  Q  QIP            ++ +  PE    P  V NL  
Subjt:  VADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLND

Query:  PEVKKELVAPS
          VK + V  S
Subjt:  PEVKKELVAPS
A0A6J1DZ90 Ribonuclease H1.6e-0535.51Show/hide
Query:  ADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLNDP
        AD      PI  PQ   P+P  + P +R  AE  MPQ+TTYN LYD+ +GQY     K  Q  QIP            ++ +  PE    P  V NL   
Subjt:  ADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLNDP

Query:  EVKKELV
          K + V
Subjt:  EVKKELV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCAGATCTGACTGCATTAGATACTCCGATTGAAAATCCTCAAGTGTGCCTGCCATTTCCATCCAGCTTCGCTCCATATATTCGTACGACGGCAGAAGTGTCCAT
GCCGCAACATACCACCTATAATTCCCTATATGATATACTTGTAGGACAATATCTTTTTCCACTATTTAAAGAAGGCCAAATTCCCCAAATCCCCATGACTAGCCAAACTG
ACGTTTCTTATTTAAATCCTGACGTTTCTTATTTAAATCCAGAAGTTTCAAAAATACCTTTTGTGGTCCCTAACCTGAATGATCCAGAAGTGAAGAAGGAGCTAGTTGCG
CCGTCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCAGATCTGACTGCATTAGATACTCCGATTGAAAATCCTCAAGTGTGCCTGCCATTTCCATCCAGCTTCGCTCCATATATTCGTACGACGGCAGAAGTGTCCAT
GCCGCAACATACCACCTATAATTCCCTATATGATATACTTGTAGGACAATATCTTTTTCCACTATTTAAAGAAGGCCAAATTCCCCAAATCCCCATGACTAGCCAAACTG
ACGTTTCTTATTTAAATCCTGACGTTTCTTATTTAAATCCAGAAGTTTCAAAAATACCTTTTGTGGTCCCTAACCTGAATGATCCAGAAGTGAAGAAGGAGCTAGTTGCG
CCGTCTAATTAA
Protein sequenceShow/hide protein sequence
MVADLTALDTPIENPQVCLPFPSSFAPYIRTTAEVSMPQHTTYNSLYDILVGQYLFPLFKEGQIPQIPMTSQTDVSYLNPDVSYLNPEVSKIPFVVPNLNDPEVKKELVA
PSN