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Lag0007743 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007743
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr9:4158340..4158855
RNA-Seq ExpressionLag0007743
SyntenyLag0007743
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.5e-0545.1Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTLDALKGLN
        +++PR+KGYV+ +V+K+F  IE+ +NP IP+ TET R LN+C +   +  N
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTLDALKGLN
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]2.2e-0454.76Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYC
        V++P+ +GYVD  V+KLFF +E+ +NP IP+  ET R LNYC
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYC
KAA0037618.1 uncharacterized protein E6C27_scaffold277G002790 [Cucumis melo var. makuwa]1.7e-0454.76Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYC
        V++P+ +GYVD  V+KLFF +E+ +NP IP+  ET R LNYC
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYC
KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.2e-0450Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTL
        V++PR+KGYV+ +V+K+F  IE+ +NP IP+  ET R LN+C +
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTL
TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]7.6e-0550Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTL
        +++PR+KGYV+ +V+K+F  IE+ +NP IP+ TET R LN+C +
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTL
TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like7.4e-0645.1Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTLDALKGLN
        +++PR+KGYV+ +V+K+F  IE+ +NP IP+ TET R LN+C +   +  N
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTLDALKGLN
A0A5A7SUT0 Reverse transcriptase1.1e-0450Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTL
        V++PR+KGYV+ +V+K+F  IE+ +NP IP+  ET R LN+C +
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTL
A0A5A7T494 Uncharacterized protein8.2e-0554.76Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYC
        V++P+ +GYVD  V+KLFF +E+ +NP IP+  ET R LNYC
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYC
A0A5A7T6E2 Girdin-like1.1e-0454.76Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYC
        V++P+ +GYVD  V+KLFF +E+ +NP IP+  ET R LNYC
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYC
A0A5D3D0S2 Glial fibrillary acidic protein-like3.7e-0550Show/hide
Query:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTL
        +++PR+KGYV+ +V+K+F  IE+ +NP IP+ TET R LN+C +
Subjt:  VLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTGTATCCTAGAGTAAAAGGGTATGTGGATGTCGATGTCTTGAAGCTCTTCTTCAGCATTGAGCAAAGGATGAATCCAGCCATACCTCTTCCGACAGAAACAGT
TCGGATGCTCAATTATTGCACATTGGATGCCCTTAAAGGCCTTAATCTACAAATGCGGGAGCTTCCACACAGTTCCTCTGGTATCCTTGCGGGTGCGTCCATTATGCTCC
GTGGTTGGCCTGGTGGCAAAGCTGGTTTAAGAAATTCATACCAGCAACTCATGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTGTATCCTAGAGTAAAAGGGTATGTGGATGTCGATGTCTTGAAGCTCTTCTTCAGCATTGAGCAAAGGATGAATCCAGCCATACCTCTTCCGACAGAAACAGT
TCGGATGCTCAATTATTGCACATTGGATGCCCTTAAAGGCCTTAATCTACAAATGCGGGAGCTTCCACACAGTTCCTCTGGTATCCTTGCGGGTGCGTCCATTATGCTCC
GTGGTTGGCCTGGTGGCAAAGCTGGTTTAAGAAATTCATACCAGCAACTCATGGTCTAA
Protein sequenceShow/hide protein sequence
MVLYPRVKGYVDVDVLKLFFSIEQRMNPAIPLPTETVRMLNYCTLDALKGLNLQMRELPHSSSGILAGASIMLRGWPGGKAGLRNSYQQLMV