; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007757 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007757
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr9:4345646..4346182
RNA-Seq ExpressionLag0007757
SyntenyLag0007757
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.9e-3761.59Show/hide
Query:  EEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNND
        EEVDNS + +Q+TSVFDRIKP TTR SVFQR+S+T  EEENQC  ST TR SAF+ LS+ST KK +PSTS FD LK+ +DQ +R+M +L+VK   E N+D
Subjt:  EEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS
         K+ S +PSRMKRK SV INTEGSL VKP  II TN  ++G ++  DE+KS
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-3761.59Show/hide
Query:  EEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNND
        EEVDNS + +Q+TSVFDRIKP TTR SVFQR+SM   EEENQC  ST  R SAF+RLS+ST KK +PSTS FD LK+T+DQ +R+M +L+ K   E N+D
Subjt:  EEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS
         K+ S +PSRMKRK SV INTEGSL VKP  II TN  ++G ++  DE+KS
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.3e-3758.18Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +Q+TSVFDRIKP TTR SVFQR+SM   EEENQC MST TR SAF+RLS+S  KK +PSTS FD LK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD

Query:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKSF
        +L+ K   E N+D K+ S +PSR+KRK S+ INTEGSL VKP  II TN  ++G ++  DE+K F
Subjt:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKSF

KAA0068201.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.8e-3759.15Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QKTSVFDRIKP TTR SVFQR+SM   EEENQC M T  + SAF+RLS+ST  K +PSTS FD LK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD

Query:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS
        +L+ K   E N+D K+ S +PSRMKRK SV INTEGSL VKP  II TN  ++G +Q  DE+KS
Subjt:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS

TYK18884.1 gag protease polyprotein [Cucumis melo var. makuwa]8.6e-3757.93Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD
        E +N   SY    EE+DNS + +QKTS+FDRIKP TTR SVFQR+SM   EEENQC  ST  R SAF+RLS+ST KK +PSTS FD LK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD

Query:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS
        +L+ K   E N+D K+ S +PSRMKRK S+ INT+GSL VKP LII TN  ++G ++  DE+KS
Subjt:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS

TrEMBL top hitse value%identityAlignment
A0A5A7TGM1 Retrotransposon gag protein1.4e-3761.59Show/hide
Query:  EEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNND
        EEVDNS + +Q+TSVFDRIKP TTR SVFQR+S+T  EEENQC  ST TR SAF+ LS+ST KK +PSTS FD LK+ +DQ +R+M +L+VK   E N+D
Subjt:  EEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS
         K+ S +PSRMKRK SV INTEGSL VKP  II TN  ++G ++  DE+KS
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS

A0A5A7TQ06 Retrotransposon gag protein8.4e-3861.59Show/hide
Query:  EEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNND
        EEVDNS + +Q+TSVFDRIKP TTR SVFQR+SM   EEENQC  ST  R SAF+RLS+ST KK +PSTS FD LK+T+DQ +R+M +L+ K   E N+D
Subjt:  EEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNND

Query:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS
         K+ S +PSRMKRK SV INTEGSL VKP  II TN  ++G ++  DE+KS
Subjt:  KKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS

A0A5A7U974 Retrotransposon gag protein1.1e-3758.18Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +Q+TSVFDRIKP TTR SVFQR+SM   EEENQC MST TR SAF+RLS+S  KK +PSTS FD LK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD

Query:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKSF
        +L+ K   E N+D K+ S +PSR+KRK S+ INTEGSL VKP  II TN  ++G ++  DE+K F
Subjt:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKSF

A0A5A7VRG7 Retrotransposon gag protein1.9e-3759.15Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QKTSVFDRIKP TTR SVFQR+SM   EEENQC M T  + SAF+RLS+ST  K +PSTS FD LK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD

Query:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS
        +L+ K   E N+D K+ S +PSRMKRK SV INTEGSL VKP  II TN  ++G +Q  DE+KS
Subjt:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS

A0A5D3D5Q0 Gag protease polyprotein4.1e-3757.93Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD
        E +N   SY    EE+DNS + +QKTS+FDRIKP TTR SVFQR+SM   EEENQC  ST  R SAF+RLS+ST KK +PSTS FD LK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMD

Query:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS
        +L+ K   E N+D K+ S +PSRMKRK S+ INT+GSL VKP LII TN  ++G ++  DE+KS
Subjt:  NLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATAAATCCTTCTCCAAAACTCTCCACAAAAAGGAAAAAGAAAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACA
AAAGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGACCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCT
CCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCACCTCAAAGTAACAAGCGATCAACCTAAAAGA
AAGATGGATAACTTGGAGGTGAAACTTTTGGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATAC
AGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATTCTACAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATAAATCCTTCTCCAAAACTCTCCACAAAAAGGAAAAAGAAAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACA
AAAGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGACCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCT
CCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCACCTCAAAGTAACAAGCGATCAACCTAAAAGA
AAGATGGATAACTTGGAGGTGAAACTTTTGGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATAC
AGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATTCTACAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAA
Protein sequenceShow/hide protein sequence
MLNKSFSKTLHKKEKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKR
KMDNLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKSF