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Lag0007780 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007780
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr9:4588982..4590707
RNA-Seq ExpressionLag0007780
SyntenyLag0007780
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031952.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.4e-1343.75Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDP
        EA+IQ K NLCGF+PATIE+ D   GN++L+FG +S  + P  +   L   +FSN +D+ R++QVM+DEG       P  +Y      IPS+ R+P
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDP

KAA0063414.1 uncharacterized protein E6C27_scaffold508G00510 [Cucumis melo var. makuwa]4.7e-1453.42Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNS
        EA+I+V  NLCGF+PA +EL+D+FR N++L+FGD+  L++PK+I  +L +S  +N +DL RINQV+ DEG  S
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNS

TYK16775.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-1343.75Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDP
        EA+IQ K NLCGF+PATIE+ D   GN++L+FG +S  + P  +   L   +FSN +D+ R++QVM+DEG       P  +Y      IPS+ R+P
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDP

TYK28792.1 pseudouridylate synthase 7-like protein isoform X1 [Cucumis melo var. makuwa]8.3e-1153.62Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDE
        EA+IQ+K NLCGFMPATIE+ D  RG  +L++GD+  L     +   L L DF NP+DL R+ QVM+DE
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDE

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]2.8e-1152.86Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEG
        +A I+VK NLCGF+PATIE+ +  RG++YL+FGD+ST + P  +   L  SDF+NP+DL R+N+V   EG
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEG

TrEMBL top hitse value%identityAlignment
A0A5A7SLN9 Retrotransposable element Tf26.6e-1443.75Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDP
        EA+IQ K NLCGF+PATIE+ D   GN++L+FG +S  + P  +   L   +FSN +D+ R++QVM+DEG       P  +Y      IPS+ R+P
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDP

A0A5A7U128 Uncharacterized protein8.9e-1144.19Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEG----FNSQIQNPDVEY
        EARIQVK NLCGF+P+TIE+ D  RGN++L+FGD   L+ P     ++ +SDF   + L RI +V++DEG    F  + + P++ +
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEG----FNSQIQNPDVEY

A0A5A7V878 DUF4283 domain-containing protein2.3e-1453.42Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNS
        EA+I+V  NLCGF+PA +EL+D+FR N++L+FGD+  L++PK+I  +L +S  +N +DL RINQV+ DEG  S
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNS

A0A5D3CZ35 DNA/RNA polymerases superfamily protein6.6e-1443.75Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDP
        EA+IQ K NLCGF+PATIE+ D   GN++L+FG +S  + P  +   L   +FSN +D+ R++QVM+DEG       P  +Y      IPS+ R+P
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDP

A0A5D3DYX0 Pseudouridylate synthase 7-like protein isoform X14.0e-1153.62Show/hide
Query:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDE
        EA+IQ+K NLCGFMPATIE+ D  RG  +L++GD+  L     +   L L DF NP+DL R+ QVM+DE
Subjt:  EARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAACTAGAACGGAGGAAGGAACGAGGAGAGAGGAGAGAGCATTCGGGGGGGAAGCTAGAATTCAGGTTAAATCAAATTTATGTGGTTTTATGCCAGCTACAAT
TGAACTTAAAGATAGTTTTAGAGGGAATGTTTATCTTCATTTTGGTGATGTGTCTACTTTGGATTCTCCGAAAATTATTCACCATAGTCTTGAGTTGAGCGATTTTTCCA
ACCCAATGGACCTTTTTCGAATCAATCAAGTAATGGAAGATGAAGGGTTTAATTCTCAAATTCAAAATCCAGATGTTGAATACTATGGAAAAATTCTGGAAATTCCTTCT
GTATCAAGGGACCCTAAGGTAATTTACAAGTTTGTTCAATTACCTTGTGATGATTGTAAAATTAAAGGACTTTCTGTTTTGCCGAATATTTCTGAAGTTGAAGAGTCAAC
GAGATTTAATTTTGATGATGCTTTATTATCAAGAAAGTCCTTTTCAGATTCCCCTGTAATAGGAAAGGACTTTTCGAATATTGTAAAGGCCCGTGATAAGTCTTTATCTC
AGGGGCAATCTTTCAAATGTCCAGCAATTAATAACTTAGAGGCTTCTTCAAATGTGAACTCGGTTCAGGATATTTTCAATTCCGATTTAAATGAAAATTATTCTTTGTCT
GAATACTTGGACTCCGGTATTCCATCTAGTGTTAAAGAAGTGCATGATAATTTCTGTAAATCTTATTCTAAATATTATGTGCGAAAGAAAGGACCAAGTGTGGAAGGTGA
TATTTTAAAGGATTCTTCAAAGGCAGCAGATAAGTCAGGTGATTTTGCAATCAATAGTTGTAATATTGGGCCAGAAGGTGTGCTTTTCACAAGAGTTCTTTTTCCCTCTT
CTAATGATAGTTTGCCGGCAAATGCTTCATCTCATTGTGGTAATAAAAATTCAGATGATGAGTCAGAGGTTAGTATGAGCAGTGAAGAGATTGATTTTCCTCCAGAAAAT
CTTTTGAATGTTGATAGTTGTGATATCTCGGTAAATGATGATTTGAATTTGCTCTTTACTTCTCCATCAAAGTCTAATGCTTCAAGCAAGAAGATTGTGGATGACTTTAA
GTCTTCAATTCCATCTGCTTCAGATAATTTAGATACTTTTTCTGCTCTTATTAAAGCCAGTGGTCTACAGTTCAAGGAAATTCTGTCATCCCCATTGTTGGAAGCAACTA
AGCAGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAACTAGAACGGAGGAAGGAACGAGGAGAGAGGAGAGAGCATTCGGGGGGGAAGCTAGAATTCAGGTTAAATCAAATTTATGTGGTTTTATGCCAGCTACAAT
TGAACTTAAAGATAGTTTTAGAGGGAATGTTTATCTTCATTTTGGTGATGTGTCTACTTTGGATTCTCCGAAAATTATTCACCATAGTCTTGAGTTGAGCGATTTTTCCA
ACCCAATGGACCTTTTTCGAATCAATCAAGTAATGGAAGATGAAGGGTTTAATTCTCAAATTCAAAATCCAGATGTTGAATACTATGGAAAAATTCTGGAAATTCCTTCT
GTATCAAGGGACCCTAAGGTAATTTACAAGTTTGTTCAATTACCTTGTGATGATTGTAAAATTAAAGGACTTTCTGTTTTGCCGAATATTTCTGAAGTTGAAGAGTCAAC
GAGATTTAATTTTGATGATGCTTTATTATCAAGAAAGTCCTTTTCAGATTCCCCTGTAATAGGAAAGGACTTTTCGAATATTGTAAAGGCCCGTGATAAGTCTTTATCTC
AGGGGCAATCTTTCAAATGTCCAGCAATTAATAACTTAGAGGCTTCTTCAAATGTGAACTCGGTTCAGGATATTTTCAATTCCGATTTAAATGAAAATTATTCTTTGTCT
GAATACTTGGACTCCGGTATTCCATCTAGTGTTAAAGAAGTGCATGATAATTTCTGTAAATCTTATTCTAAATATTATGTGCGAAAGAAAGGACCAAGTGTGGAAGGTGA
TATTTTAAAGGATTCTTCAAAGGCAGCAGATAAGTCAGGTGATTTTGCAATCAATAGTTGTAATATTGGGCCAGAAGGTGTGCTTTTCACAAGAGTTCTTTTTCCCTCTT
CTAATGATAGTTTGCCGGCAAATGCTTCATCTCATTGTGGTAATAAAAATTCAGATGATGAGTCAGAGGTTAGTATGAGCAGTGAAGAGATTGATTTTCCTCCAGAAAAT
CTTTTGAATGTTGATAGTTGTGATATCTCGGTAAATGATGATTTGAATTTGCTCTTTACTTCTCCATCAAAGTCTAATGCTTCAAGCAAGAAGATTGTGGATGACTTTAA
GTCTTCAATTCCATCTGCTTCAGATAATTTAGATACTTTTTCTGCTCTTATTAAAGCCAGTGGTCTACAGTTCAAGGAAATTCTGTCATCCCCATTGTTGGAAGCAACTA
AGCAGTACTAG
Protein sequenceShow/hide protein sequence
MDETRTEEGTRREERAFGGEARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPS
VSRDPKVIYKFVQLPCDDCKIKGLSVLPNISEVEESTRFNFDDALLSRKSFSDSPVIGKDFSNIVKARDKSLSQGQSFKCPAINNLEASSNVNSVQDIFNSDLNENYSLS
EYLDSGIPSSVKEVHDNFCKSYSKYYVRKKGPSVEGDILKDSSKAADKSGDFAINSCNIGPEGVLFTRVLFPSSNDSLPANASSHCGNKNSDDESEVSMSSEEIDFPPEN
LLNVDSCDISVNDDLNLLFTSPSKSNASSKKIVDDFKSSIPSASDNLDTFSALIKASGLQFKEILSSPLLEATKQY