; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007782 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007782
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc CCHC-type-like protein
Genome locationchr9:4603147..4604265
RNA-Seq ExpressionLag0007782
SyntenyLag0007782
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCH80348.1 hypothetical protein [Trifolium medium]8.3e-3429.57Show/hide
Query:  MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDN
        M  AW++ +  ++++L+KN++ F F +K + +   +NGPW FDRNLLIL + S +++ ++L    V  W RV +LP+  R+E IA+K+G+ +G F+E D 
Subjt:  MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDN

Query:  NQLSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYE-----FGSWMKFQGFIKQGRQ
         ++ +  G  +R+R +VD+ KPLKRG    N + KE  W+ Y+YERLP+ CF CGRI H  +DC D    D    +  E     FG W++     K   +
Subjt:  NQLSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYE-----FGSWMKFQGFIKQGRQ

Query:  QDIPEAEENQPDTNEEENDEQPTQTTETGVGLEVDLNQESPVFD--GSEDILKNFMGEDNNGNETLNINDIGDNMEWRTQYPKENNQHIDLPIMIP-NEG
             +  N   +          Q + T   ++ ++ Q+    D    + I K  M +D  G+ +        N++   +   E+   + +       EG
Subjt:  QDIPEAEENQPDTNEEENDEQPTQTTETGVGLEVDLNQESPVFD--GSEDILKNFMGEDNNGNETLNINDIGDNMEWRTQYPKENNQHIDLPIMIP-NEG

Query:  TSKLPKGMGSPQRKKSWTRRKNVIHKDKSSKETVGPPKRKTDTDV
        T  + +G G     + W R+K    K + + +TVG   +++  DV
Subjt:  TSKLPKGMGSPQRKKSWTRRKNVIHKDKSSKETVGPPKRKTDTDV

MCH84017.1 zinc CCHC-type-like protein [Trifolium medium]9.8e-3541.05Show/hide
Query:  MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDN
        M  AW+  +   +++L+KN+F F F +K++     K GPW FDRNLLIL   S +++ ++LE  +V  W RV +LP+  R+E +A+K+G+I+G+F+E D 
Subjt:  MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDN

Query:  NQLSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDC---SDKTTDDVPNLNSYE--FGSWMK
           + + G  +RIR ++D+ KPLKRG   K S   +D W+ Y+YERLP+ CF CGRI H  +DC    D  TD    L   +  FG W++
Subjt:  NQLSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDC---SDKTTDDVPNLNSYE--FGSWMK

MCH84359.1 zinc CCHC-type-like protein [Trifolium medium]1.9e-3341.67Show/hide
Query:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL
        AW+  +   +++L+KN+F F F +K++ +   KNGPW FDRNL+IL   S +++ ++LE  KV  W R+ +LP+  R+E +A+K+G+ +G F+E D  + 
Subjt:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL

Query:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDD
         +  G  +RIR+ +D+ KPLKRG   K     +D W+ Y+YERLP+ CF CGRI H  KDC +    D
Subjt:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDD

MCI00644.1 zinc CCHC-type-like protein [Trifolium medium]1.1e-3341.57Show/hide
Query:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL
        AW+  +  +V++L+KN+F F F SK+D +  +KNGPW FDRNLL+L+  S  ++ +DLE    + W RV +LP+  R+  +A+K+GD++G F + DN + 
Subjt:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL

Query:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYEFG
        SS  G  +R+++T+D+ KPLKRG + K     +   + ++YERLP  CF CG+I H  KDC     +DV + +  EFG
Subjt:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYEFG

XP_024642377.1 uncharacterized protein LOC112422874 [Medicago truncatula]5.8e-3537.97Show/hide
Query:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL
        AW+  +  ++++L+KN+F F F S+ D    + +GPW FDRNLLIL+  S+ ++ ++L+   V  W R+ +LP+  R++++A K+GD++G F E D    
Subjt:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL

Query:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYE-----FGSWMK
        ++  G SIRI+  +D+  PLKRG + K    K   W+ ++YERLP+ C++CGRI H  K+C ++T  D       E     +GSWM+
Subjt:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYE-----FGSWMK

TrEMBL top hitse value%identityAlignment
A0A392M033 CCHC-type domain-containing protein (Fragment)4.0e-3429.57Show/hide
Query:  MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDN
        M  AW++ +  ++++L+KN++ F F +K + +   +NGPW FDRNLLIL + S +++ ++L    V  W RV +LP+  R+E IA+K+G+ +G F+E D 
Subjt:  MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDN

Query:  NQLSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYE-----FGSWMKFQGFIKQGRQ
         ++ +  G  +R+R +VD+ KPLKRG    N + KE  W+ Y+YERLP+ CF CGRI H  +DC D    D    +  E     FG W++     K   +
Subjt:  NQLSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYE-----FGSWMKFQGFIKQGRQ

Query:  QDIPEAEENQPDTNEEENDEQPTQTTETGVGLEVDLNQESPVFD--GSEDILKNFMGEDNNGNETLNINDIGDNMEWRTQYPKENNQHIDLPIMIP-NEG
             +  N   +          Q + T   ++ ++ Q+    D    + I K  M +D  G+ +        N++   +   E+   + +       EG
Subjt:  QDIPEAEENQPDTNEEENDEQPTQTTETGVGLEVDLNQESPVFD--GSEDILKNFMGEDNNGNETLNINDIGDNMEWRTQYPKENNQHIDLPIMIP-NEG

Query:  TSKLPKGMGSPQRKKSWTRRKNVIHKDKSSKETVGPPKRKTDTDV
        T  + +G G     + W R+K    K + + +TVG   +++  DV
Subjt:  TSKLPKGMGSPQRKKSWTRRKNVIHKDKSSKETVGPPKRKTDTDV

A0A392M948 Zinc CCHC-type-like protein (Fragment)4.8e-3541.05Show/hide
Query:  MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDN
        M  AW+  +   +++L+KN+F F F +K++     K GPW FDRNLLIL   S +++ ++LE  +V  W RV +LP+  R+E +A+K+G+I+G+F+E D 
Subjt:  MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDN

Query:  NQLSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDC---SDKTTDDVPNLNSYE--FGSWMK
           + + G  +RIR ++D+ KPLKRG   K S   +D W+ Y+YERLP+ CF CGRI H  +DC    D  TD    L   +  FG W++
Subjt:  NQLSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDC---SDKTTDDVPNLNSYE--FGSWMK

A0A392MB81 Zinc CCHC-type-like protein (Fragment)9.0e-3441.67Show/hide
Query:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL
        AW+  +   +++L+KN+F F F +K++ +   KNGPW FDRNL+IL   S +++ ++LE  KV  W R+ +LP+  R+E +A+K+G+ +G F+E D  + 
Subjt:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL

Query:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDD
         +  G  +RIR+ +D+ KPLKRG   K     +D W+ Y+YERLP+ CF CGRI H  KDC +    D
Subjt:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDD

A0A392NMN9 Zinc CCHC-type-like protein (Fragment)5.3e-3441.57Show/hide
Query:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL
        AW+  +  +V++L+KN+F F F SK+D +  +KNGPW FDRNLL+L+  S  ++ +DLE    + W RV +LP+  R+  +A+K+GD++G F + DN + 
Subjt:  AWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQL

Query:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYEFG
        SS  G  +R+++T+D+ KPLKRG + K     +   + ++YERLP  CF CG+I H  KDC     +DV + +  EFG
Subjt:  SSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYEFG

A0A6J1BSZ1 uncharacterized protein LOC1110054812.0e-3336.56Show/hide
Query:  AWK-TMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQ
        AWK     F V+ +  N+F F F    DRN  ++ GPW FDR L+I++ P +  +  D++F+ V LW    +L +   N+ +A ++G+ IG+F++ ++N 
Subjt:  AWK-TMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQ

Query:  LSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYEFGSWMKFQG
         +  WG+ +R+R   D+ KPL RG            W+  +YERLPD  + CGR+DH  KDCSD   D V    + ++G W++FQG
Subjt:  LSSSWGNSIRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYEFGSWMKFQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGAGCTTGGAAAACAATGAGTGATTTCAAAGTAGAAAATCTCAGCAAGAACGTTTTTACTTTCATCTTTGAAAGTAAAGAAGATAGAAACTGGACAATGAAGAA
TGGCCCCTGGCTCTTTGACCGAAATCTGTTAATTCTTGAAGTACCTTCAAATAGCCAAAGAACAGCAGACCTTGAATTCAAGAAGGTGGATTTATGGCCAAGGGTAATCA
ATCTTCCAATAGGGTATCGTAATGAAATTATTGCTGAGAAAATTGGAGATATTATTGGGGTCTTTCAGGAATGGGACAACAATCAACTTAGCTCATCTTGGGGCAATAGT
ATTAGGATCCGTTCAACAGTGGACATATCAAAACCCCTTAAACGAGGATTCATGTTCAAGAACAGCAAGAACAAAGAAGATTTCTGGCTTACATATCGTTATGAGAGGCT
TCCTGATTTGTGTTTTCAATGTGGAAGAATAGACCATTTTGCAAAAGATTGCTCAGACAAAACCACAGATGATGTTCCTAACCTTAATAGTTACGAATTTGGCTCATGGA
TGAAGTTCCAAGGCTTTATAAAGCAAGGAAGACAGCAAGACATACCAGAGGCAGAGGAAAATCAACCGGATACAAATGAGGAAGAGAATGATGAACAACCTACTCAAACT
ACAGAAACAGGGGTGGGGTTGGAAGTTGATTTGAATCAAGAAAGCCCAGTGTTTGATGGTTCAGAAGACATTCTGAAAAATTTTATGGGTGAAGACAATAATGGCAATGA
GACTTTAAACATAAATGATATTGGAGATAATATGGAATGGAGAACTCAATACCCAAAAGAAAATAACCAGCACATTGATCTCCCCATCATGATACCAAACGAAGGAACAA
GCAAATTACCTAAAGGTATGGGATCACCACAACGGAAAAAGAGCTGGACAAGAAGGAAAAATGTGATACATAAGGACAAATCTTCTAAGGAGACCGTTGGACCACCAAAA
AGGAAGACTGATACAGATGTTGAAAAGGATGCAAAAAGAAGGAAATATGAATCTGAGGAAGACAGGAACCAAGTGACACAATCTGAAAATTTGGTAATGGCTAGAAACCA
GCCCTGCCTTGACCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGAGCTTGGAAAACAATGAGTGATTTCAAAGTAGAAAATCTCAGCAAGAACGTTTTTACTTTCATCTTTGAAAGTAAAGAAGATAGAAACTGGACAATGAAGAA
TGGCCCCTGGCTCTTTGACCGAAATCTGTTAATTCTTGAAGTACCTTCAAATAGCCAAAGAACAGCAGACCTTGAATTCAAGAAGGTGGATTTATGGCCAAGGGTAATCA
ATCTTCCAATAGGGTATCGTAATGAAATTATTGCTGAGAAAATTGGAGATATTATTGGGGTCTTTCAGGAATGGGACAACAATCAACTTAGCTCATCTTGGGGCAATAGT
ATTAGGATCCGTTCAACAGTGGACATATCAAAACCCCTTAAACGAGGATTCATGTTCAAGAACAGCAAGAACAAAGAAGATTTCTGGCTTACATATCGTTATGAGAGGCT
TCCTGATTTGTGTTTTCAATGTGGAAGAATAGACCATTTTGCAAAAGATTGCTCAGACAAAACCACAGATGATGTTCCTAACCTTAATAGTTACGAATTTGGCTCATGGA
TGAAGTTCCAAGGCTTTATAAAGCAAGGAAGACAGCAAGACATACCAGAGGCAGAGGAAAATCAACCGGATACAAATGAGGAAGAGAATGATGAACAACCTACTCAAACT
ACAGAAACAGGGGTGGGGTTGGAAGTTGATTTGAATCAAGAAAGCCCAGTGTTTGATGGTTCAGAAGACATTCTGAAAAATTTTATGGGTGAAGACAATAATGGCAATGA
GACTTTAAACATAAATGATATTGGAGATAATATGGAATGGAGAACTCAATACCCAAAAGAAAATAACCAGCACATTGATCTCCCCATCATGATACCAAACGAAGGAACAA
GCAAATTACCTAAAGGTATGGGATCACCACAACGGAAAAAGAGCTGGACAAGAAGGAAAAATGTGATACATAAGGACAAATCTTCTAAGGAGACCGTTGGACCACCAAAA
AGGAAGACTGATACAGATGTTGAAAAGGATGCAAAAAGAAGGAAATATGAATCTGAGGAAGACAGGAACCAAGTGACACAATCTGAAAATTTGGTAATGGCTAGAAACCA
GCCCTGCCTTGACCAATGA
Protein sequenceShow/hide protein sequence
MWGAWKTMSDFKVENLSKNVFTFIFESKEDRNWTMKNGPWLFDRNLLILEVPSNSQRTADLEFKKVDLWPRVINLPIGYRNEIIAEKIGDIIGVFQEWDNNQLSSSWGNS
IRIRSTVDISKPLKRGFMFKNSKNKEDFWLTYRYERLPDLCFQCGRIDHFAKDCSDKTTDDVPNLNSYEFGSWMKFQGFIKQGRQQDIPEAEENQPDTNEEENDEQPTQT
TETGVGLEVDLNQESPVFDGSEDILKNFMGEDNNGNETLNINDIGDNMEWRTQYPKENNQHIDLPIMIPNEGTSKLPKGMGSPQRKKSWTRRKNVIHKDKSSKETVGPPK
RKTDTDVEKDAKRRKYESEEDRNQVTQSENLVMARNQPCLDQ