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Lag0007783 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007783
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr9:4612342..4612950
RNA-Seq ExpressionLag0007783
SyntenyLag0007783
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8658284.1 hypothetical protein F3Y22_tig00116971pilonHSYRG00034 [Hibiscus syriacus]2.5e-0833.33Show/hide
Query:  TVPFIRFVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNL
        T  + +F  D A+A +Q    R   FE GF      D      +   +  L W++F   P  VN+++V+EFYAN+   N   + V+G  ++++P AIN  
Subjt:  TVPFIRFVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNL

Query:  FDLQD
        F LQD
Subjt:  FDLQD

KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]7.3e-0832.38Show/hide
Query:  TVPFIRFVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNL
        T  + +F  D A+A++Q   K+   FE GF      D      +   +  L W++F   P  VN+++V+EFYAN+   N   + V+G  + ++P AI   
Subjt:  TVPFIRFVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNL

Query:  FDLQD
        F LQD
Subjt:  FDLQD

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]3.8e-0935.71Show/hide
Query:  FVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDLQ
        FV + A+  YQ +  R   FE GF      ++NL   +   +    W++F   P PVN+ IV+EFY+N+   N   V+V+G+ ++++P AIN  F LQ
Subjt:  FVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDLQ

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]3.3e-0839.22Show/hide
Query:  IRFVSDLARAKYQE-VLKRDFLFERGFDSNLPR------FLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDL
        ++F ++ A  +Y+E + K+    E+GF  N         F+   I    WRQFCA PE     +VREFYANL    +  V V+GV V W+ EAIN +F L
Subjt:  IRFVSDLARAKYQE-VLKRDFLFERGFDSNLPR------FLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDL

Query:  QD
         D
Subjt:  QD

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]2.9e-0942.16Show/hide
Query:  IRFVSDLARAKYQEVLKRDFL-FERGFDSN------LPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDL
        ++F S+ A A+Y+E +K   L  E+GF  N       P F+   I+   W+ FCA  E     +VREFYANL    +  V V+GV V WS EAIN LF L
Subjt:  IRFVSDLARAKYQEVLKRDFL-FERGFDSN------LPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDL

Query:  QD
         D
Subjt:  QD

TrEMBL top hitse value%identityAlignment
A0A2P5EK98 Uncharacterized protein (Fragment)1.6e-0839.22Show/hide
Query:  IRFVSDLARAKYQE-VLKRDFLFERGFDSNLPR------FLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDL
        ++F ++ A  +Y+E + K+    E+GF  N         F+   I    WRQFCA PE     +VREFYANL    +  V V+GV V W+ EAIN +F L
Subjt:  IRFVSDLARAKYQE-VLKRDFLFERGFDSNLPR------FLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDL

Query:  QD
         D
Subjt:  QD

A0A2P5EYL5 Uncharacterized protein1.4e-0942.16Show/hide
Query:  IRFVSDLARAKYQEVLKRDFL-FERGFDSN------LPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDL
        ++F S+ A A+Y+E +K   L  E+GF  N       P F+   I+   W+ FCA  E     +VREFYANL    +  V V+GV V WS EAIN LF L
Subjt:  IRFVSDLARAKYQEVLKRDFL-FERGFDSN------LPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDL

Query:  QD
         D
Subjt:  QD

A0A6A2WM54 Uncharacterized protein3.5e-0832.38Show/hide
Query:  TVPFIRFVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNL
        T  + +F +D A+A++Q    R   FE GF      D      +   +  L W++F   P  VN+++V+EFYAN+   N + + V+G  ++++  AIN+ 
Subjt:  TVPFIRFVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNL

Query:  FDLQD
        F LQD
Subjt:  FDLQD

A0A6A2XVV9 Uncharacterized protein1.2e-0833.33Show/hide
Query:  TVPFIRFVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNL
        T  + +F  D A+A +Q    R   FE GF      D      +   +  L W++F   P  VN+++V+EFYAN+   N   + V+G  ++++P AIN  
Subjt:  TVPFIRFVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNL

Query:  FDLQD
        F LQD
Subjt:  FDLQD

A0A6A2ZUE4 Uncharacterized protein1.9e-0935.71Show/hide
Query:  FVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDLQ
        FV + A+  YQ +  R   FE GF      ++NL   +   +    W++F   P PVN+ IV+EFY+N+   N   V+V+G+ ++++P AIN  F LQ
Subjt:  FVSDLARAKYQEVLKRDFLFERGF------DSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAAAAAGAGAAAACACCGGAGCCGGTGCAGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCGCCGCCGCATCAAACGGAAGGCGGGTCGCGTGAG
GGTGATTCGGAACACTCCATCACCGCCGACGACGGACTCTGAGAAAGAAAAGAGGGAAGCTGAAAATAAGACAAAGGAAGAAGAGGCAAGGAAGGTAGAGGAAGAGATTT
TGCGAGAGCAACGAGGTGACAAGGGCAAAGGAATTGCCGGAGCATCGGGTGAGATTGAGGAACCAACGGTACCGTTCATTCGCTTTGTCAGCGATCTTGCTCGAGCAAAA
TACCAAGAGGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGACAGTAATTTGCCTAGGTTCTTAAAGTCTGGAATCGTGAACCTCGGGTGGAGGCAATTTTGTGC
GAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAACCTTGACGTTAAGAATGATTTTGAAGTTATTGTGCAAGGAGTGCCTGTACAATGGAGCCCAG
AAGCCATTAATAATTTGTTTGATCTCCAGGATTTCCACATGCAGTTTTCAATGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGAAAAAGAGAAAACACCGGAGCCGGTGCAGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCGCCGCCGCATCAAACGGAAGGCGGGTCGCGTGAG
GGTGATTCGGAACACTCCATCACCGCCGACGACGGACTCTGAGAAAGAAAAGAGGGAAGCTGAAAATAAGACAAAGGAAGAAGAGGCAAGGAAGGTAGAGGAAGAGATTT
TGCGAGAGCAACGAGGTGACAAGGGCAAAGGAATTGCCGGAGCATCGGGTGAGATTGAGGAACCAACGGTACCGTTCATTCGCTTTGTCAGCGATCTTGCTCGAGCAAAA
TACCAAGAGGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGACAGTAATTTGCCTAGGTTCTTAAAGTCTGGAATCGTGAACCTCGGGTGGAGGCAATTTTGTGC
GAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAACCTTGACGTTAAGAATGATTTTGAAGTTATTGTGCAAGGAGTGCCTGTACAATGGAGCCCAG
AAGCCATTAATAATTTGTTTGATCTCCAGGATTTCCACATGCAGTTTTCAATGAGATGA
Protein sequenceShow/hide protein sequence
MPEKEKTPEPVQEAHVEVVMPEPPKRRRIKRKAGRVRVIRNTPSPPTTDSEKEKREAENKTKEEEARKVEEEILREQRGDKGKGIAGASGEIEEPTVPFIRFVSDLARAK
YQEVLKRDFLFERGFDSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDLQDFHMQFSMR