; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007796 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007796
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:4887289..4888455
RNA-Seq ExpressionLag0007796
SyntenyLag0007796
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.5e-4150.87Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G+++AIR R F FTLT STR WF++LKR+SIS FK+LARAF+ QF G   + +P   LL +KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQ

Query:  QSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELLKSK
        ++ ESL+DY+ RFN E LQVEG ++   L+   +G++DE+ +   GK    T++E  SRAQ YMS  EL+ SK
Subjt:  QSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELLKSK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.0e-4251.7Show/hide
Query:  EEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLA
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS+A++ R F  TL+ S R WF +LKR SIS FK LA+AF+ QF+G R + +P   LL 
Subjt:  EEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLA

Query:  VKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELLKSK
        +KQ++ ESL DY+ RFN+E LQVEG +   +L+A  + + DE      GK  P T++E +SRAQKYMSA E   SK
Subjt:  VKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELLKSK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]6.6e-4251.18Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + + +AIR R F FTLT S R+WF +LKR SIS FK+LA AF+ QF+G R + KP   LL +KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQ

Query:  QSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELL
        ++ ESL++Y+ RFN+E LQVEG ++   L+A  +G++DER +   GK  P T+ E +SRAQKYMSA EL+
Subjt:  QSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELL

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]6.2e-4841.39Show/hide
Query:  EGSLIRDPKKGKEPVEYVDESETESKGKKTNNATSKVR-GLKHTERTVLRSLEPSTSRRTDLRNLIEEKCRVTKTAEFEAKVAEAE-AKAAKAKAAEAEA
        E  L+RDPKKGK P     ES+TE   + TN+  SK+R G    +RT  R  +P  +++       + K       + +     +E     K K A+   
Subjt:  EGSLIRDPKKGKEPVEYVDESETESKGKKTNNATSKVR-GLKHTERTVLRSLEPSTSRRTDLRNLIEEKCRVTKTAEFEAKVAEAE-AKAAKAKAAEAEA

Query:  KKNHLPWKTELLNTLKELGNPQGDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFF
             P  +E  ++ KE               G D+EEL+DQ D PF EE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS+A+R R F 
Subjt:  KKNHLPWKTELLNTLKELGNPQGDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFF

Query:  FTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQ
         TL  S R WF +LKR SIS FK LARAF+ QF+G R + +P   LL +KQ++ ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE      GK  
Subjt:  FTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQ

Query:  PRTYAEFVSRAQKYMSAEELLKSKIRNESTR
        P T++E +SRAQ+YMSA E   SK   +  R
Subjt:  PRTYAEFVSRAQKYMSAEELLKSKIRNESTR

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.8e-4847.96Show/hide
Query:  LNTLKELGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHW
        LN  K +  P+  + +  +   G D+EEL+ Q D PF EE+M+ +VP KFK+PT K +DG  +PV HL+AY+ WMD +GVSDAIR R F  TL  S R W
Subjt:  LNTLKELGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHW

Query:  FERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSR
        F +LKR SIS FK LARAF+ QF+G R + +P   LL +KQ++ ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE       K  P T++E +SR
Subjt:  FERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSR

Query:  AQKYMSAEELLKSKIRNESTR
        AQ+YMSA E   SK   +  R
Subjt:  AQKYMSAEELLKSKIRNESTR

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166197.1e-4250.87Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQ
        MK +VP KFK+P  K YDG  DP+ HL+ Y  W D +G+++AIR R F FTLT STR WF++LKR+SIS FK+LARAF+ QF G   + +P   LL +KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQ

Query:  QSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELLKSK
        ++ ESL+DY+ RFN E LQVEG ++   L+   +G++DE+ +   GK    T++E  SRAQ YMS  EL+ SK
Subjt:  QSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELLKSK

A0A6J1D7D2 uncharacterized protein LOC1110183071.4e-4251.7Show/hide
Query:  EEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLA
        EE+MK +VP KFK+PT K +DG  D V HL+AY+ WMD +GVS+A++ R F  TL+ S R WF +LKR SIS FK LA+AF+ QF+G R + +P   LL 
Subjt:  EEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLA

Query:  VKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELLKSK
        +KQ++ ESL DY+ RFN+E LQVEG +   +L+A  + + DE      GK  P T++E +SRAQKYMSA E   SK
Subjt:  VKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELLKSK

A0A6J1DWY0 uncharacterized protein LOC1110252933.0e-4841.39Show/hide
Query:  EGSLIRDPKKGKEPVEYVDESETESKGKKTNNATSKVR-GLKHTERTVLRSLEPSTSRRTDLRNLIEEKCRVTKTAEFEAKVAEAE-AKAAKAKAAEAEA
        E  L+RDPKKGK P     ES+TE   + TN+  SK+R G    +RT  R  +P  +++       + K       + +     +E     K K A+   
Subjt:  EGSLIRDPKKGKEPVEYVDESETESKGKKTNNATSKVR-GLKHTERTVLRSLEPSTSRRTDLRNLIEEKCRVTKTAEFEAKVAEAE-AKAAKAKAAEAEA

Query:  KKNHLPWKTELLNTLKELGNPQGDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFF
             P  +E  ++ KE               G D+EEL+DQ D PF EE+M+ +VP KFK+PT K +D   DPV HL+AY+ WMD +GVS+A+R R F 
Subjt:  KKNHLPWKTELLNTLKELGNPQGDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFF

Query:  FTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQ
         TL  S R WF +LKR SIS FK LARAF+ QF+G R + +P   LL +KQ++ ESLRDY+ RFN+E LQVEG ++  +L+A  +G+ DE      GK  
Subjt:  FTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQ

Query:  PRTYAEFVSRAQKYMSAEELLKSKIRNESTR
        P T++E +SRAQ+YMSA E   SK   +  R
Subjt:  PRTYAEFVSRAQKYMSAEELLKSKIRNESTR

A0A6J1DZ49 uncharacterized protein LOC1110248513.2e-4251.18Show/hide
Query:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQ
        MK +   KFK+P    YDG  DP+ HL+AY+ W D + + +AIR R F FTLT S R+WF +LKR SIS FK+LA AF+ QF+G R + KP   LL +KQ
Subjt:  MKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQ

Query:  QSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELL
        ++ ESL++Y+ RFN+E LQVEG ++   L+A  +G++DER +   GK  P T+ E +SRAQKYMSA EL+
Subjt:  QSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSRAQKYMSAEELL

A0A6J1E1E7 uncharacterized protein LOC1110255481.3e-4847.96Show/hide
Query:  LNTLKELGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHW
        LN  K +  P+  + +  +   G D+EEL+ Q D PF EE+M+ +VP KFK+PT K +DG  +PV HL+AY+ WMD +GVSDAIR R F  TL  S R W
Subjt:  LNTLKELGNPQ-GDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFFFTLTESTRHW

Query:  FERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSR
        F +LKR SIS FK LARAF+ QF+G R + +P   LL +KQ++ ESL DY+ RFN+E LQ+EG ++  +L+A  +G+ DE       K  P T++E +SR
Subjt:  FERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSR

Query:  AQKYMSAEELLKSKIRNESTR
        AQ+YMSA E   SK   +  R
Subjt:  AQKYMSAEELLKSKIRNESTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGAGCTTGATTAGAGACCCGAAGAAGGGGAAGGAGCCAGT
TGAATACGTGGATGAATCAGAGACAGAATCCAAAGGAAAGAAGACCAACAACGCAACCAGCAAGGTTAGGGGGCTGAAGCACACAGAACGCACAGTACTGAGGAGCCTTG
AGCCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGTGCAGAGTGACCAAAACTGCCGAGTTCGAGGCCAAAGTTGCCGAAGCCGAGGCTAAGGCT
GCCAAGGCCAAGGCAGCCGAGGCCGAGGCTAAGAAAAACCATCTCCCTTGGAAGACCGAGCTTCTAAACACCCTAAAGGAGCTTGGAAATCCTCAGGGAGACCTGCAGAA
GTTGAAGGACTCGGGAGGGCAAGACATGGAAGAATTAATCGACCAAGTCGACCCACCCTTCGCAGAAGAAGTCATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCTA
CATTCAAGTCGTATGATGGCAAGAAAGACCCTGTCCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTCCCGTGCATTCTTT
TTCACCCTAACAGAATCAACCAGGCATTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAGGATTTAGCCCGTGCATTCCTTGCACAGTTCATGGGAGCCAG
AGAACAACGCAAGCCTCACATCAACCTTTTAGCAGTCAAACAGCAGTCGGGGGAGAGCTTGCGTGATTACATAACGCGCTTTAATGATGAAGCACTGCAGGTTGAGGGAT
ACAGTGAGGGAGCGACCCTAGTAGCCATCACAACCGGACTGGAAGACGAAAGACAACTCAACTTAATAGGTAAGAGCCAACCCCGAACCTATGCAGAGTTCGTCTCCCGG
GCGCAGAAATACATGAGCGCAGAGGAGTTGCTCAAGTCAAAGATACGGAACGAGAGCACAAGAGGTTTTCTTCATCTAACTACGACAGTAAGAATGACAAAAGGCAGCGG
ATCGACGAGGGAGGCCGAGGCCGAGCAGACCATGGTCGAGGCGGACCAGACCAAGGAGGCTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGAGCTTGATTAGAGACCCGAAGAAGGGGAAGGAGCCAGT
TGAATACGTGGATGAATCAGAGACAGAATCCAAAGGAAAGAAGACCAACAACGCAACCAGCAAGGTTAGGGGGCTGAAGCACACAGAACGCACAGTACTGAGGAGCCTTG
AGCCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGTGCAGAGTGACCAAAACTGCCGAGTTCGAGGCCAAAGTTGCCGAAGCCGAGGCTAAGGCT
GCCAAGGCCAAGGCAGCCGAGGCCGAGGCTAAGAAAAACCATCTCCCTTGGAAGACCGAGCTTCTAAACACCCTAAAGGAGCTTGGAAATCCTCAGGGAGACCTGCAGAA
GTTGAAGGACTCGGGAGGGCAAGACATGGAAGAATTAATCGACCAAGTCGACCCACCCTTCGCAGAAGAAGTCATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCTA
CATTCAAGTCGTATGATGGCAAGAAAGACCCTGTCCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTCCCGTGCATTCTTT
TTCACCCTAACAGAATCAACCAGGCATTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAGGATTTAGCCCGTGCATTCCTTGCACAGTTCATGGGAGCCAG
AGAACAACGCAAGCCTCACATCAACCTTTTAGCAGTCAAACAGCAGTCGGGGGAGAGCTTGCGTGATTACATAACGCGCTTTAATGATGAAGCACTGCAGGTTGAGGGAT
ACAGTGAGGGAGCGACCCTAGTAGCCATCACAACCGGACTGGAAGACGAAAGACAACTCAACTTAATAGGTAAGAGCCAACCCCGAACCTATGCAGAGTTCGTCTCCCGG
GCGCAGAAATACATGAGCGCAGAGGAGTTGCTCAAGTCAAAGATACGGAACGAGAGCACAAGAGGTTTTCTTCATCTAACTACGACAGTAAGAATGACAAAAGGCAGCGG
ATCGACGAGGGAGGCCGAGGCCGAGCAGACCATGGTCGAGGCGGACCAGACCAAGGAGGCTACTTGA
Protein sequenceShow/hide protein sequence
MNQSLSRILQILDKPDPSTKLHEGSLIRDPKKGKEPVEYVDESETESKGKKTNNATSKVRGLKHTERTVLRSLEPSTSRRTDLRNLIEEKCRVTKTAEFEAKVAEAEAKA
AKAKAAEAEAKKNHLPWKTELLNTLKELGNPQGDLQKLKDSGGQDMEELIDQVDPPFAEEVMKAEVPQKFKVPTFKSYDGKKDPVQHLNAYKSWMDFHGVSDAIRSRAFF
FTLTESTRHWFERLKRRSISCFKDLARAFLAQFMGAREQRKPHINLLAVKQQSGESLRDYITRFNDEALQVEGYSEGATLVAITTGLEDERQLNLIGKSQPRTYAEFVSR
AQKYMSAEELLKSKIRNESTRGFLHLTTTVRMTKGSGSTREAEAEQTMVEADQTKEAT