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Lag0007814 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007814
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:5388334..5388693
RNA-Seq ExpressionLag0007814
SyntenyLag0007814
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RDX87927.1 hypothetical protein CR513_30539, partial [Mucuna pruriens]8.1e-0738.27Show/hide
Query:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN
        + +EI  I Q P E  H YW+ FN LCA   H+ ++E+ L+ +F +GL + DR ++D+AS G    +T R A  +IS+  +
Subjt:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN

XP_021602164.1 uncharacterized protein LOC110607373 [Manihot esculenta]1.4e-0642.86Show/hide
Query:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIIS
        + REI  I Q   E  H YW+ F  LCA    + +S + L+LHF EGL   +R+++D AS G    RT REA ++IS
Subjt:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIIS

XP_021626891.1 uncharacterized protein LOC110625565 [Manihot esculenta]4.7e-0744.16Show/hide
Query:  VTREIIYITQTPEEYFHRYWDCFNGLCALS-HYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIIS
        + REI  I Q   E  H YW+ F  LCA S  + +S++ L+LHF EGL   +R+++D AS G    RT REA ++IS
Subjt:  VTREIIYITQTPEEYFHRYWDCFNGLCALS-HYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIIS

XP_021629666.1 uncharacterized protein LOC110627626 [Manihot esculenta]4.7e-0743.59Show/hide
Query:  VTREIIYITQTPEEYFHRYWDCFNGLCALS-HYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISS
        + REI  I Q   E  H YW+ F  LCA S  + +S++ L+LHF EGL   +R+++D AS G    RT REA ++IS+
Subjt:  VTREIIYITQTPEEYFHRYWDCFNGLCALS-HYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISS

XP_027102996.1 uncharacterized protein LOC113724276 [Coffea arabica]6.2e-0741.25Show/hide
Query:  LDVTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISS
        + + REI  I Q P E+ + YW+ FN LC     Y +SE+ L+ +F EGL   DR+++D AS G    +T REA  +I S
Subjt:  LDVTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISS

TrEMBL top hitse value%identityAlignment
A0A371GBJ2 Retrotrans_gag domain-containing protein (Fragment)3.9e-0738.27Show/hide
Query:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN
        + +EI  I Q P E  H YW+ FN LCA   H+ ++E+ L+ +F +GL + DR ++D+AS G    +T R A  +IS+  +
Subjt:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN

A0A371HU33 Uncharacterized protein (Fragment)8.7e-0739.51Show/hide
Query:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN
        + +EI  I Q   E  H YW+ FN LCA   H+ +SE+ L+ +F EGL++ DR ++D AS+G    +TL  A  +IS+  +
Subjt:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN

A0A371HXJ2 Retrotrans_gag domain-containing protein (Fragment)8.7e-0739.51Show/hide
Query:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN
        + +EI  I Q   E  H YW+CFN LCA   H+ +SE+ L+ +F EGL + DR ++D AS G    +T   A  +IS+  +
Subjt:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN

A0A371I4R1 Retrotrans_gag domain-containing protein (Fragment)8.7e-0738.27Show/hide
Query:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN
        + +EI  I Q   E  H YW+ FN LCA   H+ +SE+ L+ +F EGL++ DR ++D+AS G    +T   A ++IS+  +
Subjt:  VTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGN

A0A6P6VJX3 uncharacterized protein LOC1137242763.0e-0741.25Show/hide
Query:  LDVTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISS
        + + REI  I Q P E+ + YW+ FN LC     Y +SE+ L+ +F EGL   DR+++D AS G    +T REA  +I S
Subjt:  LDVTREIIYITQTPEEYFHRYWDCFNGLCA-LSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCAATACCTTGCAGCTTCTGATTCGAGTCATCTCTCATCTCTTGGAGACCTCGATGTCACAAGAGAAATCATATACATCACCCAAACACCTGAGGAATACTTTCA
CAGGTACTGGGACTGCTTCAATGGGTTATGTGCACTTTCTCATTACCCATTATCTGAGGAGTCCTTGTTGTTGCACTTCATTGAAGGATTGTTACTTGATGACAGAAAGT
TGTTGGATATAGCGAGTAGTGGTGATGCGCCTTACAGAACACTGCGTGAGGCTATGAAGATCATTTCGAGCTTTGGCAACGTGTATTCAGTTCCTGGCATGAAAAGTTCG
AGAGGCAAATTCTTCCAATCCTTCGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCCAATACCTTGCAGCTTCTGATTCGAGTCATCTCTCATCTCTTGGAGACCTCGATGTCACAAGAGAAATCATATACATCACCCAAACACCTGAGGAATACTTTCA
CAGGTACTGGGACTGCTTCAATGGGTTATGTGCACTTTCTCATTACCCATTATCTGAGGAGTCCTTGTTGTTGCACTTCATTGAAGGATTGTTACTTGATGACAGAAAGT
TGTTGGATATAGCGAGTAGTGGTGATGCGCCTTACAGAACACTGCGTGAGGCTATGAAGATCATTTCGAGCTTTGGCAACGTGTATTCAGTTCCTGGCATGAAAAGTTCG
AGAGGCAAATTCTTCCAATCCTTCGGATAG
Protein sequenceShow/hide protein sequence
MIQYLAASDSSHLSSLGDLDVTREIIYITQTPEEYFHRYWDCFNGLCALSHYPLSEESLLLHFIEGLLLDDRKLLDIASSGDAPYRTLREAMKIISSFGNVYSVPGMKSS
RGKFFQSFG