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Lag0007853 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007853
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr9:6496943..6497577
RNA-Seq ExpressionLag0007853
SyntenyLag0007853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]1.9e-1538.17Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLA--KRYSKKKSQEVEKVQYVGNRAFTQPKAYRIC-AIMRTFRIR
        MA  S QWP++R+ + K A +YEIDE SSLKAQ+ +LTNA++KL+      S   +A    YS  +   +E+ Q+  + A  +     +  A +   R R
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLA--KRYSKKKSQEVEKVQYVGNRAFTQPKAYRIC-AIMRTFRIR

Query:  IIRMFCNHHRGLLLQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLENCSNEEKK
          R          ++  V  +   +  +  ++KNMEV++GQI   +NT+QKGKFPSD EV PRE  K  TLRSG+ L+    E+KK
Subjt:  IIRMFCNHHRGLLLQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLENCSNEEKK

XP_022846365.1 uncharacterized protein LOC111369115 [Olea europaea var. sylvestris]1.6e-1436.08Show/hide
Query:  STSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTS---SKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAYRICAIMRTFRIR--
        S S +WP + A++ K A +YE+D  ++L AQM+SLTN +  L S    K  + I   +  Y +K  +E EK+QYV ++ F Q + Y      + F  +  
Subjt:  STSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTS---SKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAYRICAIMRTFRIR--

Query:  --------IIRMFCNHHRGLLL--QTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLENCSNEE
                I+  F    R      +  ++ + T + N   A+KN+EV++GQI  AI + QKG+FPSDTEVNP E     TLRSG+ +E C   E
Subjt:  --------IIRMFCNHHRGLLL--QTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLENCSNEE

XP_022851217.1 uncharacterized protein LOC111373002 [Olea europaea var. sylvestris]2.3e-1637.89Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLT---SSKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAY---------RIC
        + + S QWP++R+++ K A +YE+D  ++L AQM+SLTN +  LT   S K  KSI   +  Y +K  +E E++QYV +R F Q   Y            
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLT---SSKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAY---------RIC

Query:  AIMRTFRIR-IIRMFCNHHRGLLL--QTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLE
        A  R   +  I+  F +  R      +  ++++ T + N    +KN+EV++GQI  AI + QKG+FPSDTEVNPRE     TLRSG+ +E
Subjt:  AIMRTFRIR-IIRMFCNHHRGLLL--QTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLE

XP_022852858.1 uncharacterized protein LOC111374418 [Olea europaea var. sylvestris]1.2e-1436.32Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLT---SSKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAYRICAIMRTFRIR
        +A+ S QW ++R+++ K A +YE+D   +L AQM+SLTN + +LT   S K  +SI   +  Y +K  +E E++QYV +R F Q   Y      + F  +
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLT---SSKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAYRICAIMRTFRIR

Query:  ----------IIRMFCNHHRGLLL--QTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLE
                  I+  F +  R      +  ++ + T + N    +KN+EV +GQI  AI + QKG+FPSDTEVNPRE+    TL SG+ +E
Subjt:  ----------IIRMFCNHHRGLLL--QTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLE

XP_022866538.1 uncharacterized protein LOC111386305 [Olea europaea var. sylvestris]3.3e-1536.22Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLT---SSKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAY------------
        +A+ S QWP++R+++ K A +YE+D  + L AQM+SLTN +  LT   S K  +SI   +  Y +K  +E E++QYV +R F Q   Y            
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLT---SSKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAY------------

Query:  ------RICAIMRTFRIRIIRMFCNHHRGLLLQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLE
               +  I+ TF    I  F         +  ++++ T + N    +KN+EV++GQI  AI + QKG+FPSD EVNPRE     TLRSG+ +E
Subjt:  ------RICAIMRTFRIRIIRMFCNHHRGLLLQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLE

TrEMBL top hitse value%identityAlignment
A0A2I4FP56 uncharacterized protein LOC1090008373.4e-1027.98Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEV--EKVQYVGNRAFT------------------
        MAS++ QWPTKR  + K A I+E++  +++ AQ+A+L++ ++ L + ++ +S   +A       S E   E+VQY+ N+ +                   
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEV--EKVQYVGNRAFT------------------

Query:  --------------QPKAYRICAIMRTFRI-RIIRMFCNHHRGLLLQT--LVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQY
                       P  +   +  +   +   +  F         +T   ++ + T  +N   A+KN+EV++GQ+   IN  Q+  FPS+TEVNP EQ 
Subjt:  --------------QPKAYRICAIMRTFRI-RIIRMFCNHHRGLLLQT--LVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQY

Query:  KVTTLRSGRRLENCSNEE
        K  TLRSGR +E   ++E
Subjt:  KVTTLRSGRRLENCSNEE

A0A2I4G4Q3 uncharacterized protein LOC1090047121.3e-0929.58Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEV--EKVQYVGNRAFT------------------
        MAS + QWP +R  + K A I+E++  ++L AQ+A+L++ ++ LT+ ++ +S   +        S EV  E+VQY+ NR +                   
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEV--EKVQYVGNRAFT------------------

Query:  --------------QPKAYRICAIMRTFRIR---IIRMFCNHHRGLLLQTLVNTLVTSVNNHDIAL-KNMEVRMGQITLAINTLQKGKFPSDTEVNPREQ
                       P  +   +  +   +    I  +   + R     + ++ + T  +N   A+ KN+EV++GQ+   IN  Q+G FPS+TEVNPREQ
Subjt:  --------------QPKAYRICAIMRTFRIR---IIRMFCNHHRGLLLQTLVNTLVTSVNNHDIAL-KNMEVRMGQITLAINTLQKGKFPSDTEVNPREQ

Query:  YKVTTLRSGRRLE
         K   LRSGR LE
Subjt:  YKVTTLRSGRRLE

A0A6J1DU19 uncharacterized protein LOC1110243619.2e-1638.17Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLA--KRYSKKKSQEVEKVQYVGNRAFTQPKAYRIC-AIMRTFRIR
        MA  S QWP++R+ + K A +YEIDE SSLKAQ+ +LTNA++KL+      S   +A    YS  +   +E+ Q+  + A  +     +  A +   R R
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLA--KRYSKKKSQEVEKVQYVGNRAFTQPKAYRIC-AIMRTFRIR

Query:  IIRMFCNHHRGLLLQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLENCSNEEKK
          R          ++  V  +   +  +  ++KNMEV++GQI   +NT+QKGKFPSD EV PRE  K  TLRSG+ L+    E+KK
Subjt:  IIRMFCNHHRGLLLQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLENCSNEEKK

A0A6P9DWY0 uncharacterized protein LOC1183440263.3e-1331.02Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEV--EKVQYVGNRAFT-----QPKAYRI-CAIMR
        MAS + QWP +R  + K A I+E++  ++L AQ+ASL++ ++ LT+ ++ +S   +A       S E   E+VQY+ NR +       P  Y +      
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEV--EKVQYVGNRAFT-----QPKAYRI-CAIMR

Query:  TFRIRIIRMFCNHHRGLLLQ---------------------------TLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKV
            +  +     H G   Q                           + ++ + T  +N   A+KN+EV++GQ+   IN  Q+G FPS+TEVNPREQ K 
Subjt:  TFRIRIIRMFCNHHRGLLLQ---------------------------TLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKV

Query:  TTLRSGRRLENCSNEE
         TLRSGR L+   + E
Subjt:  TTLRSGRRLENCSNEE

A0A6P9E7J9 uncharacterized protein LOC1183442381.5e-1029.83Show/hide
Query:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEV--EKVQYVGNRAF----TQPKAYRICAIMRTF
        MAS + QWPT+R  + K   I+E++  ++L AQ A+L++ ++ LT+ ++ +S   +        S E   E+VQY+ N  +    +  ++      +   
Subjt:  MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEV--EKVQYVGNRAF----TQPKAYRICAIMRTF

Query:  RIRIIRMFCNHHRGLLLQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLE
         +  ++    + R   + + +  + T  +N +  +KN+EV++GQ+   IN  Q+G  P +T+VNP EQ K  TLRSGR +E
Subjt:  RIRIIRMFCNHHRGLLLQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACTAGTTGCCAATGGCCCACGAAGAGGGCAACATCATCAAAGAAGGCTGAAATTTATGAAATTGATGAGTCAAGCTCGTTGAAGGCACAAATGGCTTCTCT
GACAAATGCATTGAACAAATTGACTTCTTCTAAGGTGGTTAAATCCATTTCCACCTTAGCAAAGAGATATTCAAAGAAGAAGAGCCAAGAAGTGGAAAAAGTTCAGTACG
TAGGCAATCGTGCATTCACTCAACCCAAGGCCTACCGAATTTGCGCAATCATGAGAACTTTTCGTATTCGAATAATAAGAATGTTTTGCAACCACCACCGAGGTTTGCTT
CTACAAACGTTAGTGAACACCTTGGTAACATCTGTAAACAACCATGACATAGCTTTAAAAAATATGGAAGTTCGGATGGGGCAGATAACATTAGCAATAAACACCCTTCA
AAAGGGTAAGTTTCCTAGTGATACTGAAGTGAACCCTAGAGAGCAATACAAGGTGACTACCCTTCGAAGTGGGAGACGACTGGAGAATTGCTCAAATGAAGAGAAGAAAT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAACTAGTTGCCAATGGCCCACGAAGAGGGCAACATCATCAAAGAAGGCTGAAATTTATGAAATTGATGAGTCAAGCTCGTTGAAGGCACAAATGGCTTCTCT
GACAAATGCATTGAACAAATTGACTTCTTCTAAGGTGGTTAAATCCATTTCCACCTTAGCAAAGAGATATTCAAAGAAGAAGAGCCAAGAAGTGGAAAAAGTTCAGTACG
TAGGCAATCGTGCATTCACTCAACCCAAGGCCTACCGAATTTGCGCAATCATGAGAACTTTTCGTATTCGAATAATAAGAATGTTTTGCAACCACCACCGAGGTTTGCTT
CTACAAACGTTAGTGAACACCTTGGTAACATCTGTAAACAACCATGACATAGCTTTAAAAAATATGGAAGTTCGGATGGGGCAGATAACATTAGCAATAAACACCCTTCA
AAAGGGTAAGTTTCCTAGTGATACTGAAGTGAACCCTAGAGAGCAATACAAGGTGACTACCCTTCGAAGTGGGAGACGACTGGAGAATTGCTCAAATGAAGAGAAGAAAT
AG
Protein sequenceShow/hide protein sequence
MASTSCQWPTKRATSSKKAEIYEIDESSSLKAQMASLTNALNKLTSSKVVKSISTLAKRYSKKKSQEVEKVQYVGNRAFTQPKAYRICAIMRTFRIRIIRMFCNHHRGLL
LQTLVNTLVTSVNNHDIALKNMEVRMGQITLAINTLQKGKFPSDTEVNPREQYKVTTLRSGRRLENCSNEEKK