; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007865 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007865
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:6743948..6744685
RNA-Seq ExpressionLag0007865
SyntenyLag0007865
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.4e-3738.19Show/hide
Query:  MRCTFKSAWNIPTD-LMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRF
        ++ T K AW +      V+ +G N+FLF+    + +NR+LR  PW  D+ L+++  P+ + +P  M F+ V+ W+HF DL +   N++MA RLGNAIG F
Subjt:  MRCTFKSAWNIPTD-LMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRF

Query:  QEYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSG--RSSNV
        ++  +    + W   LRVR+  D+  P  RGIK+ L+ P+G  W  I+YE++P+   +CGR+ H+ KDC+    D  S   Q YG W+ F G   SSN+
Subjt:  QEYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSG--RSSNV

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.5e-4141.97Show/hide
Query:  AWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQEYGNGGR
        AW +   L VE +G NLFLF    E   NRV++  PW  DK L+VL KP      + ++F  V FWIH  DLPM   N++MA RLGNAIG F +     +
Subjt:  AWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQEYGNGGR

Query:  GYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCN--FAFNDDGSARCQEYGMWMAFSGRSSNVYR
        G+ W  SLR+R+++DI+ P RRGIK+ ++ P+G  W  I+YE++P+ C +CG I H + DC+  +    D S    EYG W+ F G  +   +
Subjt:  GYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCN--FAFNDDGSARCQEYGMWMAFSGRSSNVYR

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.2e-3333.19Show/hide
Query:  MRCTFKSAWNIPTDLM-VEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRF
        M+ T ++AW +  +   V+ +G NLFLFS      +N++ +  PW  D+ L++++KP+ ++ P+ + F  +  W+ F DLP+    + MA RLGNA+G F
Subjt:  MRCTFKSAWNIPTDLM-VEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRF

Query:  QEYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSG--------
        +E         W  +LRVR++LDIS P RRGIK+ L+ P+G  W  I+YE++P+ C +CG  S              S +  +YG W+ + G        
Subjt:  QEYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSG--------

Query:  ----------RSSNVYRSPSTSPVGTNRMLIEVSP
                  +S N   S STSPVG     ++ +P
Subjt:  ----------RSSNVYRSPSTSPVGTNRMLIEVSP

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]1.1e-2933.33Show/hide
Query:  MRCTFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQ
        M+ T  S W     + V  +G NLF+F       + R+L   PW  DK LL+L +  P V+P+ ++  +V FW+H C+LP+ L N+ + + +GNA+G+F 
Subjt:  MRCTFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQ

Query:  EYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQ--EYGMWM
        +      G  W  ++ +R+ LD+  P RRG+K+ L+  +  IW   KYE++P  C +CGR+ H  ++C+   +     R    +YG W+
Subjt:  EYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQ--EYGMWM

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]8.2e-3035.08Show/hide
Query:  MRCTFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQ
        M+ T  S W     + V  +G NLF+F       + RVL   PW  DK LL+L +  P V+P+ ++   V FW+H C+LP+ L N+ + + +GNA+G+F 
Subjt:  MRCTFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQ

Query:  EYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLN--DPLGSIWTLIKYEKMPEICSYCGRISHVTKDCN--FAFNDDGSARCQEYGMWM
        +      G  W  ++R+R+ +D+  P RRG+K+ L+  DP   IW   KYE++P  C +CGR+ H  ++C+   +F D       +YG W+
Subjt:  EYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLN--DPLGSIWTLIKYEKMPEICSYCGRISHVTKDCN--FAFNDDGSARCQEYGMWM

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein4.1e-2731.88Show/hide
Query:  RCTFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQE
        + T  + W    ++ +E MG N+F F  ++   + R+L   PWL DK LLVL +     + T ++F+YV FWI   +LP+   N+ +   LG  +G+ +E
Subjt:  RCTFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQE

Query:  YGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWM-AFSGRSSNVYRSP
           G  G    + +R+R+++D+  P +RG++V L D       +I YE++P  C YCG+I H+ +DC     +  S+   ++G WM A S   S      
Subjt:  YGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWM-AFSGRSSNVYRSP

Query:  STSPVGT
          SP G+
Subjt:  STSPVGT

A0A5E4G034 PREDICTED: DUF4283 domain-containing1.2e-2635.14Show/hide
Query:  TFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQEYG
        T    W+   +++V+ +G NLFLF   +E  + RVLR  PW  DK L++L  P   + P+ M  KY  FWI   ++P+   + ++  ++GN+ GR  +  
Subjt:  TFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQEYG

Query:  NGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLG-SIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWM
         G  G      LR+R+ +D+S P RRG K+ L  P G +++   +YE++PE C  CGR+ HV K+C+F       A  + YG W+
Subjt:  NGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLG-SIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWM

A0A6J1BSZ1 uncharacterized protein LOC1110054811.2e-3738.19Show/hide
Query:  MRCTFKSAWNIPTD-LMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRF
        ++ T K AW +      V+ +G N+FLF+    + +NR+LR  PW  D+ L+++  P+ + +P  M F+ V+ W+HF DL +   N++MA RLGNAIG F
Subjt:  MRCTFKSAWNIPTD-LMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRF

Query:  QEYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSG--RSSNV
        ++  +    + W   LRVR+  D+  P  RGIK+ L+ P+G  W  I+YE++P+   +CGR+ H+ KDC+    D  S   Q YG W+ F G   SSN+
Subjt:  QEYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSG--RSSNV

A0A6J1DU55 uncharacterized protein LOC1110231351.7e-4141.97Show/hide
Query:  AWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQEYGNGGR
        AW +   L VE +G NLFLF    E   NRV++  PW  DK L+VL KP      + ++F  V FWIH  DLPM   N++MA RLGNAIG F +     +
Subjt:  AWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQEYGNGGR

Query:  GYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCN--FAFNDDGSARCQEYGMWMAFSGRSSNVYR
        G+ W  SLR+R+++DI+ P RRGIK+ ++ P+G  W  I+YE++P+ C +CG I H + DC+  +    D S    EYG W+ F G  +   +
Subjt:  GYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCN--FAFNDDGSARCQEYGMWMAFSGRSSNVYR

A0A6J1DX30 uncharacterized protein LOC1110248745.9e-3433.19Show/hide
Query:  MRCTFKSAWNIPTDLM-VEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRF
        M+ T ++AW +  +   V+ +G NLFLFS      +N++ +  PW  D+ L++++KP+ ++ P+ + F  +  W+ F DLP+    + MA RLGNA+G F
Subjt:  MRCTFKSAWNIPTDLM-VEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRF

Query:  QEYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSG--------
        +E         W  +LRVR++LDIS P RRGIK+ L+ P+G  W  I+YE++P+ C +CG  S              S +  +YG W+ + G        
Subjt:  QEYGNGGRGYGWKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSG--------

Query:  ----------RSSNVYRSPSTSPVGTNRMLIEVSP
                  +S N   S STSPVG     ++ +P
Subjt:  ----------RSSNVYRSPSTSPVGTNRMLIEVSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGCACTTTTAAGTCCGCTTGGAACATTCCAACTGACCTTATGGTGGAGAAGATGGGTCCTAATTTGTTCCTTTTTTCATTGCGATCGGAAGCTTATCAGAATCG
GGTACTTCGCCAGGAGCCATGGCTTTTAGATAAATTTCTCCTCGTTCTATCGAAGCCAATTCCCATGGTGAGACCTACAGTGATGAAATTTAAATATGTGACGTTTTGGA
TTCACTTTTGTGATTTACCGATGGACCTCTACAACCAATCAATGGCGGAAAGATTGGGTAACGCAATTGGTCGTTTCCAGGAGTATGGTAACGGCGGGCGCGGTTATGGC
TGGAAGGAAAGTTTACGAGTGCGAATTATTCTTGACATTTCGTTTCCTTTTCGACGAGGCATCAAGGTCCGCCTTAATGATCCATTGGGGAGCATTTGGACTCTCATCAA
ATACGAAAAAATGCCAGAGATATGTTCATATTGCGGAAGGATCAGTCATGTTACAAAGGATTGTAACTTTGCTTTCAATGATGATGGTTCTGCTCGGTGCCAAGAGTACG
GGATGTGGATGGCCTTTTCGGGTCGTTCTTCGAATGTGTATCGTTCACCATCTACTAGCCCGGTGGGTACTAATCGCATGCTTATAGAGGTATCACCGATTCAACATGAC
CAACATGCTCAAATTCATGGCGTCACGGAAGCCCACGGTTTGTCAGCGGGAATAGAGCAGCGGTCATCTCCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTGCACTTTTAAGTCCGCTTGGAACATTCCAACTGACCTTATGGTGGAGAAGATGGGTCCTAATTTGTTCCTTTTTTCATTGCGATCGGAAGCTTATCAGAATCG
GGTACTTCGCCAGGAGCCATGGCTTTTAGATAAATTTCTCCTCGTTCTATCGAAGCCAATTCCCATGGTGAGACCTACAGTGATGAAATTTAAATATGTGACGTTTTGGA
TTCACTTTTGTGATTTACCGATGGACCTCTACAACCAATCAATGGCGGAAAGATTGGGTAACGCAATTGGTCGTTTCCAGGAGTATGGTAACGGCGGGCGCGGTTATGGC
TGGAAGGAAAGTTTACGAGTGCGAATTATTCTTGACATTTCGTTTCCTTTTCGACGAGGCATCAAGGTCCGCCTTAATGATCCATTGGGGAGCATTTGGACTCTCATCAA
ATACGAAAAAATGCCAGAGATATGTTCATATTGCGGAAGGATCAGTCATGTTACAAAGGATTGTAACTTTGCTTTCAATGATGATGGTTCTGCTCGGTGCCAAGAGTACG
GGATGTGGATGGCCTTTTCGGGTCGTTCTTCGAATGTGTATCGTTCACCATCTACTAGCCCGGTGGGTACTAATCGCATGCTTATAGAGGTATCACCGATTCAACATGAC
CAACATGCTCAAATTCATGGCGTCACGGAAGCCCACGGTTTGTCAGCGGGAATAGAGCAGCGGTCATCTCCTTTGTAA
Protein sequenceShow/hide protein sequence
MRCTFKSAWNIPTDLMVEKMGPNLFLFSLRSEAYQNRVLRQEPWLLDKFLLVLSKPIPMVRPTVMKFKYVTFWIHFCDLPMDLYNQSMAERLGNAIGRFQEYGNGGRGYG
WKESLRVRIILDISFPFRRGIKVRLNDPLGSIWTLIKYEKMPEICSYCGRISHVTKDCNFAFNDDGSARCQEYGMWMAFSGRSSNVYRSPSTSPVGTNRMLIEVSPIQHD
QHAQIHGVTEAHGLSAGIEQRSSPL