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Lag0007872 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007872
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:6869534..6869935
RNA-Seq ExpressionLag0007872
SyntenyLag0007872
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]6.2e-1648.51Show/hide
Query:  GEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVASYFKELFSTSNPNQEAINEILSC
        GEEIRK E ++ N+L +EE YW+ RSR DWLK GD+NTK+FHSKA+ R++K NK+ G+ + +G WV + + +      +F++LF++SNP+Q  I+E L  
Subjt:  GEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVASYFKELFSTSNPNQEAINEILSC

Query:  L
        L
Subjt:  L

XP_015382608.1 uncharacterized protein LOC107175577 [Citrus sinensis]1.4e-1544.35Show/hide
Query:  WKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVASYFKEL
        WK+R +Q    + SR   +EI+  E +++N++ +EE YW+ RSR DWLK GD+NTK+FH KA+ RKKK N++ GI N  G W++ +K V +   +YF EL
Subjt:  WKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVASYFKEL

Query:  FSTSNPNQEAINEIL
        F+T+ P+Q  +  +L
Subjt:  FSTSNPNQEAINEIL

XP_015382878.1 uncharacterized protein LOC107175701 [Citrus sinensis]2.0e-1442.27Show/hide
Query:  EEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVASYFKELFSTSNPNQEAINEIL
        EE+++ E +++N+L +EE +W+ RSR DWLK GD+N K+FH+KA+ +KKK N++ G+ ++ G W+ E  KV + +  YF  +F+T+NP+Q  ++  L
Subjt:  EEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVASYFKELFSTSNPNQEAINEIL

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]2.6e-1439.73Show/hide
Query:  MESREAEGSIASTISWKEREI------------QVLSSHSSR---AKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRN
        M  + ++ S+A  I W + E             Q+ S   SR    KG +I++ ER+++ +L ++E YW+ RSR DWLK GD+NTK+FH KA+ RKKK N
Subjt:  MESREAEGSIASTISWKEREI------------QVLSSHSSR---AKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRN

Query:  KMEGITNKEGVWVRESKKVGETVASYFKELFSTSNPNQEAINEILS
        ++ GI N  G W+  ++ V      YF  LF+TS PNQ+ I   LS
Subjt:  KMEGITNKEGVWVRESKKVGETVASYFKELFSTSNPNQEAINEILS

XP_024043217.1 uncharacterized protein LOC112099919 [Citrus clementina]3.4e-1438.76Show/hide
Query:  SREAEGSIASTISWKERE-IQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRES
        S++  G++ + ++  +R+ +++  +H       EIR  E+++ENLL +EE YWR RSR +WLK GD+NTK+F+SKA     K+N + G+ N++ VWV + 
Subjt:  SREAEGSIASTISWKERE-IQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRES

Query:  KKVGETVASYFKELFSTSNPNQEAINEIL
        ++V     +YF  LF+TS+P +E I + L
Subjt:  KKVGETVASYFKELFSTSNPNQEAINEIL

TrEMBL top hitse value%identityAlignment
A0A2N9FJU7 CCHC-type domain-containing protein1.3e-1440.46Show/hide
Query:  SREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESK
        SRE  GS+A+TI  +   +Q L   SS      I + + EL +LLE EE YW  RSR  W+K GD+NTK+FH+  N +++  N + G+ +  GVW  E  
Subjt:  SREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESK

Query:  KVGETVASYFKELFSTSNPNQEAINEILSCL
        K+ +    YF+ LF++S+P  E IN  L+ L
Subjt:  KVGETVASYFKELFSTSNPNQEAINEILSCL

A0A2N9GPZ7 Reverse transcriptase domain-containing protein4.4e-1538.28Show/hide
Query:  SREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESK
        SRE  GS+AS+I  K  ++Q L + +       I + + +L  LLE+EE +WR RSR  W+  GD+NTK+FH++ N  +++ N + G+ +++GVW  E  
Subjt:  SREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESK

Query:  KVGETVASYFKELFSTSNPNQEAINEIL
        K+ E    YF+ +F++SNP+ E+I  +L
Subjt:  KVGETVASYFKELFSTSNPNQEAINEIL

A0A2N9IPS8 Reverse transcriptase domain-containing protein4.4e-1538.28Show/hide
Query:  SREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESK
        SRE  GS+AS+I  K  ++Q L + +       I + + +L  LLE+EE +WR RSR  W+  GD+NTK+FH++ N  +++ N + G+ +++GVW  E  
Subjt:  SREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESK

Query:  KVGETVASYFKELFSTSNPNQEAINEIL
        K+ E    YF+ +F++SNP+ E+I  +L
Subjt:  KVGETVASYFKELFSTSNPNQEAINEIL

A0A803PV25 Uncharacterized protein2.2e-1437.21Show/hide
Query:  SREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESK
        +R+ +  + S +   ++ +  L+        E I++ E +L  LLE++E+YWR RSR  WL+WGD+NTK+FH KA+ R+KK N+++G+ +  GVW  +  
Subjt:  SREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESK

Query:  KVGETVASYFKELFSTSNPNQEAINEILS
         V   V  Y+++LF++S+ N+  +NE+LS
Subjt:  KVGETVASYFKELFSTSNPNQEAINEILS

A0A803Q1K6 Uncharacterized protein9.7e-1542.34Show/hide
Query:  IQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVASYFKELFSTSN
        + VLS+ S      E++K E++L  +LE++E YWR RSR  WLKWGD NTK+FH KA+ R+KK N ++G+ +  GVW +E+  V   V  YF+ +F TS 
Subjt:  IQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVASYFKELFSTSN

Query:  PNQEAINEILS
           +  +E+++
Subjt:  PNQEAINEILS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCAAGAGAGGCTGAAGGCTCGATAGCTTCGACTATATCTTGGAAAGAAAGAGAGATTCAAGTCCTGTCGAGCCACAGCAGCAGAGCCAAAGGGGAAGAGATTAG
GAAAGCTGAAAGGGAGCTCGAAAATTTGTTAGAGGAAGAGGAGAAATATTGGAGAATTCGTTCTAGAGAGGATTGGCTCAAATGGGGCGACCAAAACACGAAATGGTTCC
ATTCTAAAGCCAATTTTCGAAAAAAAAAAAGAAATAAAATGGAAGGGATCACGAACAAGGAAGGTGTTTGGGTGAGGGAAAGTAAGAAGGTGGGGGAGACGGTTGCTTCG
TATTTCAAGGAGTTATTCTCTACTTCAAACCCAAACCAAGAAGCTATTAATGAGATTTTAAGCTGCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCAAGAGAGGCTGAAGGCTCGATAGCTTCGACTATATCTTGGAAAGAAAGAGAGATTCAAGTCCTGTCGAGCCACAGCAGCAGAGCCAAAGGGGAAGAGATTAG
GAAAGCTGAAAGGGAGCTCGAAAATTTGTTAGAGGAAGAGGAGAAATATTGGAGAATTCGTTCTAGAGAGGATTGGCTCAAATGGGGCGACCAAAACACGAAATGGTTCC
ATTCTAAAGCCAATTTTCGAAAAAAAAAAAGAAATAAAATGGAAGGGATCACGAACAAGGAAGGTGTTTGGGTGAGGGAAAGTAAGAAGGTGGGGGAGACGGTTGCTTCG
TATTTCAAGGAGTTATTCTCTACTTCAAACCCAAACCAAGAAGCTATTAATGAGATTTTAAGCTGCCTCTAG
Protein sequenceShow/hide protein sequence
MESREAEGSIASTISWKEREIQVLSSHSSRAKGEEIRKAERELENLLEEEEKYWRIRSREDWLKWGDQNTKWFHSKANFRKKKRNKMEGITNKEGVWVRESKKVGETVAS
YFKELFSTSNPNQEAINEILSCL