; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007873 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007873
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:6869966..6870361
RNA-Seq ExpressionLag0007873
SyntenyLag0007873
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024039324.1 uncharacterized protein LOC112097962 [Citrus clementina]7.0e-3654.96Show/hide
Query:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH
        + + FT EEIV AL +M+PTKAP PDG   +FFQ +W+ ++   +  CM ILNEG ++  +N++FIALIPKT  PK++ E+ PIS CNV+Y+++AK IA+
Subjt:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH

Query:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF
        RLK +L QIIS TQSAF+P RLI+DNV++G+
Subjt:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.9e-3351.91Show/hide
Query:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH
        + K FT E++  AL  M PTKAP PDG    FFQ +W+ +++  +S C+ +LNE  +   +N++FIALIPK  NP+++ +Y PIS CNV+Y+VVAK IA+
Subjt:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH

Query:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF
        R+K +L QIIS  QSAF+P RLITDNV++G+
Subjt:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]1.2e-3250Show/hide
Query:  QFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLK
        +FT EE+V A+K MNPTKAP  DG   LF+Q +W  LK++ ++ C+ +LN+G D+  +N++ +ALIPK   P+R+EE+ PIS CNV+YK+V+K +A+R++
Subjt:  QFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLK

Query:  KVLDQIISQTQSAFVPGRLITDNVVVGF
          L  ++S +QSAFV GRLI DN +VG+
Subjt:  KVLDQIISQTQSAFVPGRLITDNVVVGF

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]7.7e-3555.73Show/hide
Query:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH
        ++ QFT EE+ +AL +M PTKAP PDG + LF+Q +W  + D  +S  ++ LN G  +  IN++ I LIPK +NP+RM E+ PIS CNV+YK+++KV+A+
Subjt:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH

Query:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF
        RLK+VL QIIS TQSAFVPGRLITDNV+V +
Subjt:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF

XP_042939342.1 uncharacterized protein LOC122274363 [Carya illinoinensis]8.5e-3453.44Show/hide
Query:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH
        ++KQFT EEI  AL +MNP  AP PDG   LF+Q +WE + ++     +EILNEG ++ PINN+FI L+PK +NP+++ EY PI  CNV+YKVV+KV+++
Subjt:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH

Query:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF
        RLK++L  II+ TQ AF+PGR+I +NV+V F
Subjt:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF

TrEMBL top hitse value%identityAlignment
A0A2N9EPY2 Reverse transcriptase domain-containing protein6.0e-3351.85Show/hide
Query:  MNK----QFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAK
        MNK    QFT EE+ +AL++M P KAP PDG   LF+Q YW  L ++     +  LN GK +  IN+++I LIPK +NP+ ++E+ PI+ CNV+YK+++K
Subjt:  MNK----QFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAK

Query:  VIAHRLKKVLDQIISQTQSAFVPGRLITDNVVVGF
        V+A+RLKK+L QI+S+ Q+AFVPGRLITDN++V F
Subjt:  VIAHRLKKVLDQIISQTQSAFVPGRLITDNVVVGF

A0A2N9G161 Reverse transcriptase domain-containing protein1.6e-3352.76Show/hide
Query:  FTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKK
        FT  E+++ALK+M P KAP PDG   +F+Q YW  + ++ ++  +  LN GK    +N+S++ LIPKT++P+++ EY PIS CNVVYK+++KV+A+RLKK
Subjt:  FTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKK

Query:  VLDQIISQTQSAFVPGRLITDNVVVGF
        VL Q++S+TQSAFVPGR+ITDNV++ F
Subjt:  VLDQIISQTQSAFVPGRLITDNVVVGF

A0A2N9G1P5 Reverse transcriptase domain-containing protein1.6e-3352.76Show/hide
Query:  FTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKK
        FT  E+++ALK+M P KAP PDG   +F+Q YW  + ++ ++  +  LN GK    +N+S++ LIPKT++P+++ EY PIS CNVVYK+++KV+A+RLKK
Subjt:  FTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKK

Query:  VLDQIISQTQSAFVPGRLITDNVVVGF
        VL Q++S+TQSAFVPGR+ITDNV++ F
Subjt:  VLDQIISQTQSAFVPGRLITDNVVVGF

A0A2N9HLP3 Uncharacterized protein4.6e-3352.67Show/hide
Query:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH
        +N+ FT  E+V+ALK+M P KAP PDG   LFFQ YW  + DE   + +  LN GK +  IN+++I LIPK +NP+ + ++ PI  CNV+YK+++KV+A+
Subjt:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAH

Query:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF
        RLK +L +IIS++QSAFVPGRLITDN++V F
Subjt:  RLKKVLDQIISQTQSAFVPGRLITDNVVVGF

A0A803PWX1 Uncharacterized protein1.1e-3452.76Show/hide
Query:  FTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKK
        F+VEE+V A+K MNPTKAP  DG   LF+Q +W  LKDE +++C+ +LN G D+  +N++ +ALIPK   P+++EE+ PIS CNV+YK+V+K +A+RL+ 
Subjt:  FTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKK

Query:  VLDQIISQTQSAFVPGRLITDNVVVGF
         LDQ++S +QSAF+ GRLI DN +VG+
Subjt:  VLDQIISQTQSAFVPGRLITDNVVVGF

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein4.7e-1131.4Show/hide
Query:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKT-RNPKRMEEYIPISQCNVVYKVVAKVIA
        +N+  T  EIV+ +  +   K+P PDG    F+Q Y E L    + +   I  EG        + I LIPK  R+  + E + PIS  N+  K++ K++A
Subjt:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKT-RNPKRMEEYIPISQCNVVYKVVAKVIA

Query:  HRLKKVLDQIISQTQSAFVPG
        +R+++ + ++I   Q  F+PG
Subjt:  HRLKKVLDQIISQTQSAFVPG

P08548 LINE-1 reverse transcriptase homolog1.2e-1131.4Show/hide
Query:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKT-RNPKRMEEYIPISQCNVVYKVVAKVIA
        +N+  +  EI S ++ +   K+P PDG  + F+Q + E L    +++   I  EG        + I LIPK  ++P R E Y PIS  N+  K++ K++ 
Subjt:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKT-RNPKRMEEYIPISQCNVVYKVVAKVIA

Query:  HRLKKVLDQIISQTQSAFVPG
        +R+++ + +II   Q  F+PG
Subjt:  HRLKKVLDQIISQTQSAFVPG

P11369 LINE-1 retrotransposable element ORF2 protein5.2e-1029.6Show/hide
Query:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSF----IALIPK-TRNPKRMEEYIPISQCNVVYKVVA
        +N   + +EI + +  +   K+P PDG    F+Q +    K++ + I  ++ ++ +  G + NSF    I LIPK  ++P ++E + PIS  N+  K++ 
Subjt:  MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSF----IALIPK-TRNPKRMEEYIPISQCNVVYKVVA

Query:  KVIAHRLKKVLDQIISQTQSAFVPG
        K++A+R+++ +  II   Q  F+PG
Subjt:  KVIAHRLKKVLDQIISQTQSAFVPG

P14381 Transposon TX1 uncharacterized 149 kDa protein2.4e-1536.07Show/hide
Query:  TVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKKV
        T++E+  AL+ M   K+P  DG    FFQ +W+ L  +F  +  E   +G+       + ++L+PK  + + ++ + P+S  +  YK+VAK I+ RLK V
Subjt:  TVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKKV

Query:  LDQIISQTQSAFVPGRLITDNV
        L ++I   QS  VPGR I DNV
Subjt:  LDQIISQTQSAFVPGRLITDNV

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.7e-0833.33Show/hide
Query:  EEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVV
        +EI +A+  M   KAP PD     FF   W  +KD  ++   E    G  +   N + I LIPK     ++  + P+S C VVYK++
Subjt:  EEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGCAATTCACAGTAGAGGAAATTGTCTCAGCTTTAAAAAGGATGAATCCTACAAAGGCCCCAAGTCCCGATGGGGCTCACACGCTCTTCTTTCAGCATTATTG
GGAGGGTCTAAAGGATGAGTTCATGAGTATTTGTATGGAGATCCTTAATGAAGGCAAAGACATGGGTCCTATAAATAATTCTTTCATCGCGCTTATTCCTAAAACTCGGA
ATCCCAAGAGGATGGAGGAGTACATACCCATTAGTCAGTGCAACGTGGTGTATAAAGTGGTAGCAAAAGTGATAGCTCACAGGCTTAAGAAAGTGCTTGATCAAATCATT
TCCCAAACTCAATCCGCTTTTGTCCCTGGCAGGTTGATCACAGATAACGTTGTGGTCGGTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGCAATTCACAGTAGAGGAAATTGTCTCAGCTTTAAAAAGGATGAATCCTACAAAGGCCCCAAGTCCCGATGGGGCTCACACGCTCTTCTTTCAGCATTATTG
GGAGGGTCTAAAGGATGAGTTCATGAGTATTTGTATGGAGATCCTTAATGAAGGCAAAGACATGGGTCCTATAAATAATTCTTTCATCGCGCTTATTCCTAAAACTCGGA
ATCCCAAGAGGATGGAGGAGTACATACCCATTAGTCAGTGCAACGTGGTGTATAAAGTGGTAGCAAAAGTGATAGCTCACAGGCTTAAGAAAGTGCTTGATCAAATCATT
TCCCAAACTCAATCCGCTTTTGTCCCTGGCAGGTTGATCACAGATAACGTTGTGGTCGGTTTCTAG
Protein sequenceShow/hide protein sequence
MNKQFTVEEIVSALKRMNPTKAPSPDGAHTLFFQHYWEGLKDEFMSICMEILNEGKDMGPINNSFIALIPKTRNPKRMEEYIPISQCNVVYKVVAKVIAHRLKKVLDQII
SQTQSAFVPGRLITDNVVVGF