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Lag0007887 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007887
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description1-deoxy-D-xylulose 5-phosphate synthase family protein
Genome locationchr9:7329808..7330269
RNA-Seq ExpressionLag0007887
SyntenyLag0007887
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]2.7e-0729.41Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ
        +PT+HD+T S E++ +LY I+KG KIN+G +I +EI     +  GKLFF  LI + C+   +    DE+    K  +        + + A ++   ST+ 
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ

Query:  AIPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLKTYWVYVKERD
        A            S  P+       E L        ++ + L+T+W Y +ERD
Subjt:  AIPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLKTYWVYVKERD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.2e-0829.19Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ
        +PTTH  T S ++++LL++++ G  IN+G +I  EI +   ++ G LFF SLI +LC+  +     +EE       ID   + ++    AQ     ST Q
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ

Query:  AIPSLGLTPASPLSHTPVSRPTPS-----SEGLAFAYHQLDRIEDTLK---TYWVYVKERD
           S   T +S  ++  + +   +     S+     YH +  ++ T K    +W Y KERD
Subjt:  AIPSLGLTPASPLSHTPVSRPTPS-----SEGLAFAYHQLDRIEDTLK---TYWVYVKERD

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.4e-0828.66Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKL-QQNNAQRKDKASTS
        +PTTH  T S ++++LLY+++ G  IN+G +I  EI +   ++ G LFF SLI QLC+  +     +EE       ID   + ++ Q+   +   + STS
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKL-QQNNAQRKDKASTS

Query:  QAIPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLK---TYWVYVKERD
        +   +        +     +     S+     YH +  ++ T K    +W Y KERD
Subjt:  QAIPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLK---TYWVYVKERD

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]9.4e-0835.64Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKL-QQNNAQRKDKASTS
        +PTTH  T S E+V+LLY+++ G  IN+G II  EI +Y  ++ G LFF SLI ++C   +     +EE       ID   + ++ Q+  A+   + S+S
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKL-QQNNAQRKDKASTS

Query:  Q
        +
Subjt:  Q

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]6.5e-0933.93Show/hide
Query:  PTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRV--------KIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRK
        PTTHD++ SVEK++LLY ++ G  IN+G ++ + IL   K+R GKLFF SLI +L  +          ++   +E+W     TID+  + KL++ + + +
Subjt:  PTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRV--------KIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRK

Query:  DKASTSQAIPSL
        +    ++A+  L
Subjt:  DKASTSQAIPSL

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.5e-0829.19Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ
        +PTTH  T S ++++LL++++ G  IN+G +I  EI +   ++ G LFF SLI +LC+  +     +EE       ID   + ++    AQ     ST Q
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ

Query:  AIPSLGLTPASPLSHTPVSRPTPS-----SEGLAFAYHQLDRIEDTLK---TYWVYVKERD
           S   T +S  ++  + +   +     S+     YH +  ++ T K    +W Y KERD
Subjt:  AIPSLGLTPASPLSHTPVSRPTPS-----SEGLAFAYHQLDRIEDTLK---TYWVYVKERD

A0A2P5CEY2 Uncharacterized protein7.0e-0928.66Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKL-QQNNAQRKDKASTS
        +PTTH  T S ++++LLY+++ G  IN+G +I  EI +   ++ G LFF SLI QLC+  +     +EE       ID   + ++ Q+   +   + STS
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKL-QQNNAQRKDKASTS

Query:  QAIPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLK---TYWVYVKERD
        +   +        +     +     S+     YH +  ++ T K    +W Y KERD
Subjt:  QAIPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLK---TYWVYVKERD

A0A2P5CPE8 Uncharacterized protein4.5e-0835.64Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKL-QQNNAQRKDKASTS
        +PTTH  T S E+V+LLY+++ G  IN+G II  EI +Y  ++ G LFF SLI ++C   +     +EE       ID   + ++ Q+  A+   + S+S
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKL-QQNNAQRKDKASTS

Query:  Q
        +
Subjt:  Q

A0A7J6FZ22 Uncharacterized protein1.3e-0729.41Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ
        +PT+HD+T S E++ +LY I+KG KIN+G +I +EI     +  GKLFF  LI + C+   +    DE+    K  +        + + A ++   ST+ 
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ

Query:  AIPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLKTYWVYVKERD
        A            S  P+       E L        ++ + L+T+W Y +ERD
Subjt:  AIPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLKTYWVYVKERD

W9RPD1 Uncharacterized protein5.0e-0729.22Show/hide
Query:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ
        MP++H      E+ +LL+ +MKG  +N+G +I +++      R G L+F SLI QLC    +   K E      + I   ++ +L  ++AQ ++ A    
Subjt:  MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQ

Query:  A-IPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLKTYWVYVKERD
        A  P LG   A P S   V+R +   + L+    Q       ++ +W Y K+RD
Subjt:  A-IPSLGLTPASPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLKTYWVYVKERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACCACCCACGACAACACAAGGTCAGTAGAGAAGGTCATGCTTCTCTACAACATAATGAAGGGGATGAAAATTAATATTGGGAGCATCATTAGAGAGGAGATTCT
ATCATATGGAAAAAAGAGAGTGGGGAAGCTATTCTTTGGGTCCCTCATAATCCAACTATGTCAGAGAGTCAAGATTGTTTCTAGAAAGGACGAGGAGTGGAATTTTTACA
AGTCTACCATTGACTTGCCTCTGATAGGGAAGCTACAACAGAACAATGCACAAAGAAAAGATAAAGCTTCTACCTCCCAAGCTATTCCTTCTCTGGGGCTGACACCTGCT
TCACCTCTATCACATACTCCTGTTTCAAGGCCTACACCATCATCCGAGGGCCTTGCATTTGCTTACCACCAGCTAGACCGCATTGAGGATACATTGAAAACTTATTGGGT
CTACGTAAAGGAGAGGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCACCACCCACGACAACACAAGGTCAGTAGAGAAGGTCATGCTTCTCTACAACATAATGAAGGGGATGAAAATTAATATTGGGAGCATCATTAGAGAGGAGATTCT
ATCATATGGAAAAAAGAGAGTGGGGAAGCTATTCTTTGGGTCCCTCATAATCCAACTATGTCAGAGAGTCAAGATTGTTTCTAGAAAGGACGAGGAGTGGAATTTTTACA
AGTCTACCATTGACTTGCCTCTGATAGGGAAGCTACAACAGAACAATGCACAAAGAAAAGATAAAGCTTCTACCTCCCAAGCTATTCCTTCTCTGGGGCTGACACCTGCT
TCACCTCTATCACATACTCCTGTTTCAAGGCCTACACCATCATCCGAGGGCCTTGCATTTGCTTACCACCAGCTAGACCGCATTGAGGATACATTGAAAACTTATTGGGT
CTACGTAAAGGAGAGGGATTAA
Protein sequenceShow/hide protein sequence
MPTTHDNTRSVEKVMLLYNIMKGMKINIGSIIREEILSYGKKRVGKLFFGSLIIQLCQRVKIVSRKDEEWNFYKSTIDLPLIGKLQQNNAQRKDKASTSQAIPSLGLTPA
SPLSHTPVSRPTPSSEGLAFAYHQLDRIEDTLKTYWVYVKERD