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Lag0007892 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007892
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr9:7462152..7462673
RNA-Seq ExpressionLag0007892
SyntenyLag0007892
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]3.3e-4954.34Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M++SI+ LL +EKL G+N+  WK NLNTILVV+DL+FVLTEECP  P   A + V++AY+ W KAN+K +VYI  ++++V AK+++++ TA+ IM+SL+E
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG PS+ L H A+K+++  +M+EG  VREHVLDM+  FNIAE NGG + E +QV+FI+ SLP S++ F+TNA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.6e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

A0A5A7TU93 Gag/pol protein1.6e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

A0A5A7TWB9 Gag/pol protein1.6e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

A0A5D3CPJ6 Gag/pol protein1.6e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

A0A5D3CSZ6 Gag/pol protein1.6e-4955.49Show/hide
Query:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE
        M+S+ +++L  +KL G N+  WK  +NT+L+++DL+FVL EECP VP   A + V++ YE W KANEK + YI  +LSEV AK++E++ TAREIM+SLQE
Subjt:  MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQE

Query:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA
        MFG  SYQ+ H ALK ++NA+M EG  VREHVL+M+  FN+AE NG V+ E SQV+FI+ SLP S+L FR+NA
Subjt:  MFGLPSYQLHHAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCTATTATCTCCCTGCTTAAAAACGAAAAATTAACGGGCGAAAATTTTCCTCAATGGAAATTGAACCTTAATACCATTCTCGTGGTAGAGGATCTGAAGTT
CGTCTTGACGGAGGAATGTCCTCCCGTTCCCCCTCGCACTGCCGCTCAGGCAGTAAAAGATGCCTACGAACACTGGACTAAGGCCAATGAAAAGGTCAAAGTCTATATAC
GGGTCAACTTGTCTGAAGTCTTCGCCAAGCGTTACGAGAACGTGGAAACTGCCAGGGAGATTATGAATTCCCTGCAGGAGATGTTTGGACTCCCGTCCTACCAGCTCCAC
CACGCTGCCTTGAAGAACGTCTTCAATGCCAAGATGCAGGAAGGTCAATTTGTTCGGGAACATGTCCTGGACATGATTAACCAGTTCAATATTGCTGAGGCAAATGGCGG
GGTAGTCTGCGAGCACAGTCAGGTTGCGTTCATCATTCACTCGCTTCCAGCGAGCTATCTGTCTTTCAGGACGAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCTATTATCTCCCTGCTTAAAAACGAAAAATTAACGGGCGAAAATTTTCCTCAATGGAAATTGAACCTTAATACCATTCTCGTGGTAGAGGATCTGAAGTT
CGTCTTGACGGAGGAATGTCCTCCCGTTCCCCCTCGCACTGCCGCTCAGGCAGTAAAAGATGCCTACGAACACTGGACTAAGGCCAATGAAAAGGTCAAAGTCTATATAC
GGGTCAACTTGTCTGAAGTCTTCGCCAAGCGTTACGAGAACGTGGAAACTGCCAGGGAGATTATGAATTCCCTGCAGGAGATGTTTGGACTCCCGTCCTACCAGCTCCAC
CACGCTGCCTTGAAGAACGTCTTCAATGCCAAGATGCAGGAAGGTCAATTTGTTCGGGAACATGTCCTGGACATGATTAACCAGTTCAATATTGCTGAGGCAAATGGCGG
GGTAGTCTGCGAGCACAGTCAGGTTGCGTTCATCATTCACTCGCTTCCAGCGAGCTATCTGTCTTTCAGGACGAACGCTTAG
Protein sequenceShow/hide protein sequence
MSSSIISLLKNEKLTGENFPQWKLNLNTILVVEDLKFVLTEECPPVPPRTAAQAVKDAYEHWTKANEKVKVYIRVNLSEVFAKRYENVETAREIMNSLQEMFGLPSYQLH
HAALKNVFNAKMQEGQFVREHVLDMINQFNIAEANGGVVCEHSQVAFIIHSLPASYLSFRTNA