| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-77 | 56.54 | Show/hide |
Query: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
+E+T SS Q F GNKIS+VKL DD FLLWKFQIL ALE YDLEN+L E +PPSK L+S T ++ + TPNPAY VWK+QDR+ISSWL+GS
Subjt: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
Query: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
MSE+IL QM++C SAKEIW++L IF++R LAQ M+ K KL I+KG M LKEYF KI Q DALA++ KPV +DHIL+IL+GLGS+Y+SM+SVISA+
Subjt: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
Query: GPQSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQT--KPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHT
SV EVMSLLLTQE++ ESKL S + +LPS N++ QT K E+ + N NN+ +N + RG RG +NRG R NRN+PQCQ+C K ++
Subjt: GPQSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQT--KPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHT
Query: APKCFF
A +CFF
Subjt: APKCFF
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| KAA0053143.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa] | 7.3e-65 | 56.13 | Show/hide |
Query: MEDTAVSSLQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYLEE--DPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMS
+E+T VS F GNKIS+VKL+DDNFLLWKFQIL ALE YDLEN+ E +PPSK L S +T+A + TPNP Y VWK+ +R+IS WL+GSMS
Subjt: MEDTAVSSLQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYLEE--DPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMS
Query: EDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKAGP
E+IL QM++C SAKEIW +L IF++R LAQ M+ K KL I+KG MSLKEYF KIQQ DALA++ KPV +DHIL+IL GLG +Y+SM+S+ISA+
Subjt: EDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKAGP
Query: QSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQTKPPETD-VTKNVSNNF
S+ EVMSLLLTQE++ ESKL S + +LP ++ QT + +N NN+
Subjt: QSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQTKPPETD-VTKNVSNNF
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| KAA0067213.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa] | 1.5e-57 | 60.98 | Show/hide |
Query: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
+E+T SS Q F NKIS+VKL+DDNFLLWKFQIL ALE YDLEN+L E +PPSK L+S G+++A TR TPNP Y VWK+QDR+ISSWL+GS
Subjt: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
Query: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
MSE+IL QM++C SAKEIW +L IF++R LAQ MK K KL I+K M LKEYF KIQ DALA++ KPV +DHIL+IL+GLGS+Y+SM+SVI +
Subjt: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
Query: GPQSV
SV
Subjt: GPQSV
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-77 | 56.54 | Show/hide |
Query: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
+E+T SS Q F GNKIS+VKL DD FLLWKFQIL ALE YDLEN+L E +PPSK L+S T ++ + TPNPAY VWK+QDR+ISSWL+GS
Subjt: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
Query: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
MSE+IL QM++C SAKEIW++L IF++R LAQ M+ K KL I+KG M LKEYF KI Q DALA++ KPV +DHIL+IL+GLGS+Y+SM+SVISA+
Subjt: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
Query: GPQSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQT--KPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHT
SV EVMSLLLTQE++ ESKL S + +LPS N++ QT K E+ + N NN+ +N + RG RG +NRG R NRN+PQCQ+C K ++
Subjt: GPQSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQT--KPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHT
Query: APKCFF
A +CFF
Subjt: APKCFF
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| XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia] | 6.9e-63 | 45.61 | Show/hide |
Query: VSSLQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYLE--EDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMSEDILY
+ + +T +PG+K+SIV+L DDN LLWKFQI AL+G LE+Y++ ED P++ V TE +++ ++ NPAY W KQD++IS+WL+GSM+EDIL
Subjt: VSSLQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYLE--EDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMSEDILY
Query: QMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKAGPQSVHE
QM++C SA+EIW L +F +R LA++M++K KL+ +KG +SLK+YF KI+ D+LA GK + EDHI+ IL+GLG E+++++SVI+A+ PQ++ E
Subjt: QMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKAGPQSVHE
Query: VMSLLLTQENRIESKLTSTKGSLPSANLMVQTKPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHTAPKCF
V SLLL QE R E L ++ GSLPS NL + ++ N+ + N + N + G RG N + R+W N+PQCQ+CG+F HTA +C+
Subjt: VMSLLLTQENRIESKLTSTKGSLPSANLMVQTKPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHTAPKCF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.3e-78 | 56.54 | Show/hide |
Query: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
+E+T SS Q F GNKIS+VKL DD FLLWKFQIL ALE YDLEN+L E +PPSK L+S T ++ + TPNPAY VWK+QDR+ISSWL+GS
Subjt: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
Query: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
MSE+IL QM++C SAKEIW++L IF++R LAQ M+ K KL I+KG M LKEYF KI Q DALA++ KPV +DHIL+IL+GLGS+Y+SM+SVISA+
Subjt: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
Query: GPQSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQT--KPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHT
SV EVMSLLLTQE++ ESKL S + +LPS N++ QT K E+ + N NN+ +N + RG RG +NRG R NRN+PQCQ+C K ++
Subjt: GPQSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQT--KPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHT
Query: APKCFF
A +CFF
Subjt: APKCFF
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| A0A5A7UB21 Keratin, type II cytoskeletal 1-like | 3.6e-65 | 56.13 | Show/hide |
Query: MEDTAVSSLQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYLEE--DPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMS
+E+T VS F GNKIS+VKL+DDNFLLWKFQIL ALE YDLEN+ E +PPSK L S +T+A + TPNP Y VWK+ +R+IS WL+GSMS
Subjt: MEDTAVSSLQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYLEE--DPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMS
Query: EDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKAGP
E+IL QM++C SAKEIW +L IF++R LAQ M+ K KL I+KG MSLKEYF KIQQ DALA++ KPV +DHIL+IL GLG +Y+SM+S+ISA+
Subjt: EDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKAGP
Query: QSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQTKPPETD-VTKNVSNNF
S+ EVMSLLLTQE++ ESKL S + +LP ++ QT + +N NN+
Subjt: QSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQTKPPETD-VTKNVSNNF
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| A0A5A7VGJ8 Keratin, type II cytoskeletal 1-like | 7.2e-58 | 60.98 | Show/hide |
Query: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
+E+T SS Q F NKIS+VKL+DDNFLLWKFQIL ALE YDLEN+L E +PPSK L+S G+++A TR TPNP Y VWK+QDR+ISSWL+GS
Subjt: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
Query: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
MSE+IL QM++C SAKEIW +L IF++R LAQ MK K KL I+K M LKEYF KIQ DALA++ KPV +DHIL+IL+GLGS+Y+SM+SVI +
Subjt: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
Query: GPQSV
SV
Subjt: GPQSV
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.3e-78 | 56.54 | Show/hide |
Query: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
+E+T SS Q F GNKIS+VKL DD FLLWKFQIL ALE YDLEN+L E +PPSK L+S T ++ + TPNPAY VWK+QDR+ISSWL+GS
Subjt: MEDTAVSS--LQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYL--EEDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGS
Query: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
MSE+IL QM++C SAKEIW++L IF++R LAQ M+ K KL I+KG M LKEYF KI Q DALA++ KPV +DHIL+IL+GLGS+Y+SM+SVISA+
Subjt: MSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKA
Query: GPQSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQT--KPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHT
SV EVMSLLLTQE++ ESKL S + +LPS N++ QT K E+ + N NN+ +N + RG RG +NRG R NRN+PQCQ+C K ++
Subjt: GPQSVHEVMSLLLTQENRIESKLTSTKGSLPSANLMVQT--KPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHT
Query: APKCFF
A +CFF
Subjt: APKCFF
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| A0A6J1DLT9 uncharacterized protein LOC111021757 | 3.3e-63 | 45.61 | Show/hide |
Query: VSSLQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYLE--EDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMSEDILY
+ + +T +PG+K+SIV+L DDN LLWKFQI AL+G LE+Y++ ED P++ V TE +++ ++ NPAY W KQD++IS+WL+GSM+EDIL
Subjt: VSSLQTFSPGNKISIVKLTDDNFLLWKFQILMALEGYDLENYLE--EDPPSKTLVSVTEGTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMSEDILY
Query: QMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKAGPQSVHE
QM++C SA+EIW L +F +R LA++M++K KL+ +KG +SLK+YF KI+ D+LA GK + EDHI+ IL+GLG E+++++SVI+A+ PQ++ E
Subjt: QMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSGLGSEYESMVSVISAKAGPQSVHE
Query: VMSLLLTQENRIESKLTSTKGSLPSANLMVQTKPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHTAPKCF
V SLLL QE R E L ++ GSLPS NL + ++ N+ + N + N + G RG N + R+W N+PQCQ+CG+F HTA +C+
Subjt: VMSLLLTQENRIESKLTSTKGSLPSANLMVQTKPPETDVTKNVSNNFTSNANSGNRGRGGVRGGYNTNRGGRSWNNRNRPQCQLCGKFNHTAPKCF
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 2.6e-07 | 23.28 | Show/hide |
Query: DLENYLEEDPPSKTLVSVTE--GTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTI
D +NY+ ++ + VT+ G + + +P Y W++ + ++ WL+ SM++ +L ++ +A ++W+ L ++F ++ +++ +L T+
Subjt: DLENYLEEDPPSKTLVSVTE--GTTAAEQTRRETPNPAYSVWKKQDRIISSWLVGSMSEDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTI
Query: QKGGMSLKEYFSKIQQ
++GG S++EYF K+ +
Subjt: QKGGMSLKEYFSKIQQ
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.9e-10 | 23.7 | Show/hide |
Query: WKKQDRIISSWLVGSMS-EDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSG
W+K+D I+ L G+++ + + +++++IW + F A+ +++ ++L+T G M + +Y+ K+++ D+L V PV + ++++L+G
Subjt: WKKQDRIISSWLVGSMS-EDILYQMINCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDIEDHILFILSG
Query: LGSEYESMVSVISAKAGPQSVHEVMSLLLTQENRIESKL----TSTKGSLPSANLMVQTKPPETDVTKNVSNNF----TSNANSGNRGRGGVRGGYNTNR
L +++++++VI + S + ++L +E+R++ + T S S L PP T+ ++ N N+ RGRGG YN
Subjt: LGSEYESMVSVISAKAGPQSVHEVMSLLLTQENRIESKL----TSTKGSLPSANLMVQTKPPETDVTKNVSNNF----TSNANSGNRGRGGVRGGYNTNR
Query: GGRSWNNRNRP
++N+ NRP
Subjt: GGRSWNNRNRP
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.5e-15 | 28.77 | Show/hide |
Query: TPNP-AYSVWKKQDRIISSWLVGSMSEDILYQMI--NCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDI
TP P WK++D ++ W+ G++++ +L +I CT A+++W SL +F A+ ++ + +L+T +S+ EY K++ +D L V P+
Subjt: TPNP-AYSVWKKQDRIISSWLVGSMSEDILYQMI--NCTSAKEIWDSLHQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYTDALAAVGKPVDI
Query: EDHILFILSGLGSEYESMVSVISAKAGPQSVHEVMSLLLTQENRIESKLTSTKG--SLPSANLMVQTKPPETDVTKNVSNNFTSNANSG-----NRGRGG
++ +L+GL +Y+ +++VI K+ S E S+LL +E+R+ +K S+ + PS + ++ T P + + +N SN G NRG G
Subjt: EDHILFILSGLGSEYESMVSVISAKAGPQSVHEVMSLLLTQENRIESKLTSTKG--SLPSANLMVQTKPPETDVTKNVSNNFTSNANSG-----NRGRGG
Query: VRGGYNTNRGGR
G YN N R
Subjt: VRGGYNTNRGGR
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