| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.1e-119 | 37.35 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+G+N C VKG GSV I DG ++IL VR+VP+LKRNLISLG LD++G KSENG++ VTK S+VKL GT + L +LE T+ + A
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
G++ ++ + ++ L H+ E G L + L V V++ P C H +
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
+ KS+R F + TK LDY+ SDLWGP + + GG+RYF++ +DDFS K+W+Y LK DE F
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
KF+EWK VENQT RK+K LRTDNGLE+VN++F CK+ GI RH T TP QNGLAERFNRTI+ER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
Query: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
WTG+ P+L HLRVFGC YA + KL R +C+F+GYP G+K YKLW ++ G +CIIS+DV+F+E MP+ Q + + D E
Subjt: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
Query: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
+ + S P I + P++ Q SE + ++Q + ++D EE L+ +L EP
Subjt: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
Query: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
T+ +A+ S + W A+ +EL SL +N TWSLV +P QK + KW+YK+K ++ PR+KARLVAKG+TQ+E VD+ E+FS VVRH+SIR++LS+
Subjt: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
Query: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
V F++ ++QMDVTTAFL+G LEE IYM PK EV G ED+VC LHKS+YGLK
Subjt: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
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| PKU72844.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 3.2e-116 | 36.78 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+GNN+ C V GIGS+ +++ DG ++ILK+VR VP+LKRNLISLGTLD +G+ ++SE GLL ++K ++V + G N + + + E +A L
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVL----MGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKD
Q++G HL + G++ G+ +++ +D
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVL----MGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKD
Query: FMFEDTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTID
FC S + KS R SF+ ST+ + LDYI SDLWGPARV+THGG RYFL+F+DD+S K+W+++LK+ D
Subjt: FMFEDTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTID
Query: EVFEKFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILER----------------------------
E F KF+EWK VENQ +RK+K+LRTDNGLE+ N+ F C SGI RH T + TP QNGLAER NRT+L+R
Subjt: EVFEKFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILER----------------------------
Query: -------------KWTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRD---
W G+PP+L HLRVFGC Y + KL+PR +C+FLGYP G+K Y+LW L + IIS+DV F+E+ + + S++EN+D
Subjt: -------------KWTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRD---
Query: ---------KDLEGFEIDLLPSSSSPQIANSSSQPVLHQPSEEEVTETQTDIVDTSQQAEEEGI----------LLIISLREIDKGGRTEPNTYNQAMKS
KD FE++ ++ S + S++P + E V+E D + S+ E I L+ +L + +EP +Y +A+
Subjt: ---------KDLEGFEIDLLPSSSSPQIANSSSQPVLHQPSEEEVTETQTDIVDTSQQAEEEGI----------LLIISLREIDKGGRTEPNTYNQAMKS
Query: QNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQ
++S+ W+ A+ E DSL +NNTW LV + QK V CKW+YK+K + R+KARLVA+G+TQ+E +DY+E+FS VV+HTSIRIL+ LV F+ EL+
Subjt: QNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQ
Query: QMDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKSIYGLK
Q+DV TAFL+G L+E+I M FV G E+LVC L KSIYGLK
Subjt: QMDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKSIYGLK
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| PNX96445.1 copia LTR rider [Trifolium pratense] | 1.1e-121 | 38.17 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+GNN+ C + G+GSV +L D S+++L EVR+VP+LKRNL+SLG DK G+ ++ E +L V K S L G GL+ E S +
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
+ P S+ ++ H+R +G +S L ++ + G ++++ K C E
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
+F KS R F T LDYI +DLWGPAR +H GARYFL+ VDD+S KLWV++ KT DE FE
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILER--------------------------------
F WK VENQT RK+K LRTDNGLE+ N+ F C SGI RH TTAGTP QNGLAERFNRTILER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILER--------------------------------
Query: ---------KWTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWK----FSSQTENRDKDL
W+G PP+L LRVFGC YA RQDK++PR +C+F+GYP G+KAY+LW L+PG +RCI S+DV F+E M +K TE D++L
Subjt: ---------KWTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWK----FSSQTENRDKDL
Query: EGFEIDLLPSSSSPQIANSSSQPVLHQPSE--------EEVTETQTDIV---DTSQQ----------AEEEGILLIISLREIDKGGRTEPNTYNQAMKSQ
E EI + ++ + ++ LH P E EEV ET D + D S++ A+ LI + +D+ EP Y + M+S+
Subjt: EGFEIDLLPSSSSPQIANSSSQPVLHQPSE--------EEVTETQTDIV---DTSQQ----------AEEEGILLIISLREIDKGGRTEPNTYNQAMKSQ
Query: NSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQ
N W+ A+ E+ SL +N+TW L+K+P G + V CKW++K+K ++ R+KARLVA+GFTQ+E VD+ +VFS VV+H SIR+LL++V QF+LEL+Q
Subjt: NSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQ
Query: MDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKSIYGLK
MDV TAFLYG L+E I M +VE G ED VC L +S+YGLK
Subjt: MDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKSIYGLK
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| TYK13826.1 putative polyprotein [Cucumis melo var. makuwa] | 1.1e-119 | 37.35 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+G+N C VKG GSV I DG ++IL VR+VP+LKRNLISLG LD++G KSENG++ VTK S+VKL GT + L +LE T+ + A
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
G++ ++ + ++ L H+ E G L + L V V++ P C H +
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
+ KS+R F + TK LDY+ SDLWGP + + GG+RYF++ +DDFS K+W+Y LK DE F
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
KF+EWK VENQT RK+K LRTDNGLE+VN++F CK+ GI RH T TP QNGLAERFNRTI+ER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
Query: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
WTG+ P+L HLRVFGC YA + KL R +C+F+GYP G+K YKLW ++ G +CIIS+DV+F+E MP+ Q + + D E
Subjt: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
Query: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
+ + S P I + P++ Q SE + ++Q + ++D EE L+ +L EP
Subjt: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
Query: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
T+ +A+ S + W A+ +EL SL +N TWSLV +P QK + KW+YK+K ++ PR+KARLVAKG+TQ+E VD+ E+FS VVRH+SIR++LS+
Subjt: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
Query: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
V F++ ++QMDVTTAFL+G LEE IYM PK EV G ED+VC LHKS+YGLK
Subjt: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.1e-119 | 37.35 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+G+N C VKG GSV I DG ++IL VR+VP+LKRNLISLG LD++G KSENG++ VTK S+VKL GT + L +LE T+ + A
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
G++ ++ + ++ L H+ E G L + L V V++ P C H +
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
+ KS+R F + TK LDY+ SDLWGP + + GG+RYF++ +DDFS K+W+Y LK DE F
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
KF+EWK VENQT RK+K LRTDNGLE+VN++F CK+ GI RH T TP QNGLAERFNRTI+ER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
Query: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
WTG+ P+L HLRVFGC YA + KL R +C+F+GYP G+K YKLW ++ G +CIIS+DV+F+E MP+ Q + + D E
Subjt: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
Query: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
+ + S P I + P++ Q SE + ++Q + ++D EE L+ +L EP
Subjt: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
Query: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
T+ +A+ S + W A+ +EL SL +N TWSLV +P QK + KW+YK+K ++ PR+KARLVAKG+TQ+E VD+ E+FS VVRH+SIR++LS+
Subjt: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
Query: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
V F++ ++QMDVTTAFL+G LEE IYM PK EV G ED+VC LHKS+YGLK
Subjt: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3N065 Copia LTR rider | 5.5e-122 | 38.17 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+GNN+ C + G+GSV +L D S+++L EVR+VP+LKRNL+SLG DK G+ ++ E +L V K S L G GL+ E S +
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
+ P S+ ++ H+R +G +S L ++ + G ++++ K C E
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
+F KS R F T LDYI +DLWGPAR +H GARYFL+ VDD+S KLWV++ KT DE FE
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILER--------------------------------
F WK VENQT RK+K LRTDNGLE+ N+ F C SGI RH TTAGTP QNGLAERFNRTILER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILER--------------------------------
Query: ---------KWTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWK----FSSQTENRDKDL
W+G PP+L LRVFGC YA RQDK++PR +C+F+GYP G+KAY+LW L+PG +RCI S+DV F+E M +K TE D++L
Subjt: ---------KWTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWK----FSSQTENRDKDL
Query: EGFEIDLLPSSSSPQIANSSSQPVLHQPSE--------EEVTETQTDIV---DTSQQ----------AEEEGILLIISLREIDKGGRTEPNTYNQAMKSQ
E EI + ++ + ++ LH P E EEV ET D + D S++ A+ LI + +D+ EP Y + M+S+
Subjt: EGFEIDLLPSSSSPQIANSSSQPVLHQPSE--------EEVTETQTDIV---DTSQQ----------AEEEGILLIISLREIDKGGRTEPNTYNQAMKSQ
Query: NSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQ
N W+ A+ E+ SL +N+TW L+K+P G + V CKW++K+K ++ R+KARLVA+GFTQ+E VD+ +VFS VV+H SIR+LL++V QF+LEL+Q
Subjt: NSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQ
Query: MDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKSIYGLK
MDV TAFLYG L+E I M +VE G ED VC L +S+YGLK
Subjt: MDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKSIYGLK
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| A0A445I3R1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-116 | 36.3 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+G+N+ C ++GIGS+ + DG+ +IL EVR+V ELKRNLISLG DK G+ +K E G+L V KDS+V + G N + V +
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
TTA GR++ +GL H+R + +S + L +++ ++ CG +M++ C H +
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
K+ RA F TK LDY+ +DLWGP + +H GARYFL+ VDD+S KLW+Y+ KT DE F+
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
F WK +ENQT RKIK LRTDNGLE+ ++ F CK +GI RH T AGTP QNGLAERFN TILER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
Query: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
W+G PP+L+ L+VFGC YA +QDKL+PR +CIFLGYP G+K YKLW L+ G +RC++S+DV F+E M +K + D + +E
Subjt: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
Query: IDLLPSSSSPQIANSSSQPVLHQPSEEEVTETQTDIVDTSQQAEEEGILLIISLREIDKGGRTEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLV
+ + +A + + QP + L+ SL + +P T + S+ + W+SA+ +E+ SL +N+TW L+
Subjt: IDLLPSSSSPQIANSSSQPVLHQPSEEEVTETQTDIVDTSQQAEEEGILLIISLREIDKGGRTEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLV
Query: KRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFV
K+P + V CKW++K K + RFKARLVA+GFTQ+E +D+ EVFS VV+H SIRIL+++V +F+L L+Q+DV T FLYG L+E I M F
Subjt: KRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFV
Query: EVGGEDLVCHLHKSIYGLK
G ED VC L+KS+YGLK
Subjt: EVGGEDLVCHLHKSIYGLK
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| A0A5A7UB25 Putative gag-pol polyprotein | 5.1e-120 | 37.35 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+G+N C VKG GSV I DG ++IL VR+VP+LKRNLISLG LD++G KSENG++ VTK S+VKL GT + L +LE T+ + A
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
G++ ++ + ++ L H+ E G L + L V V++ P C H +
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
+ KS+R F + TK LDY+ SDLWGP + + GG+RYF++ +DDFS K+W+Y LK DE F
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
KF+EWK VENQT RK+K LRTDNGLE+VN++F CK+ GI RH T TP QNGLAERFNRTI+ER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
Query: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
WTG+ P+L HLRVFGC YA + KL R +C+F+GYP G+K YKLW ++ G +CIIS+DV+F+E MP+ Q + + D E
Subjt: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
Query: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
+ + S P I + P++ Q SE + ++Q + ++D EE L+ +L EP
Subjt: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
Query: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
T+ +A+ S + W A+ +EL SL +N TWSLV +P QK + KW+YK+K ++ PR+KARLVAKG+TQ+E VD+ E+FS VVRH+SIR++LS+
Subjt: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
Query: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
V F++ ++QMDVTTAFL+G LEE IYM PK EV G ED+VC LHKS+YGLK
Subjt: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
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| A0A5D3CTV2 Putative polyprotein | 5.1e-120 | 37.35 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+G+N C VKG GSV I DG ++IL VR+VP+LKRNLISLG LD++G KSENG++ VTK S+VKL GT + L +LE T+ + A
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
G++ ++ + ++ L H+ E G L + L V V++ P C H +
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
+ KS+R F + TK LDY+ SDLWGP + + GG+RYF++ +DDFS K+W+Y LK DE F
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
KF+EWK VENQT RK+K LRTDNGLE+VN++F CK+ GI RH T TP QNGLAERFNRTI+ER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
Query: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
WTG+ P+L HLRVFGC YA + KL R +C+F+GYP G+K YKLW ++ G +CIIS+DV+F+E MP+ Q + + D E
Subjt: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
Query: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
+ + S P I + P++ Q SE + ++Q + ++D EE L+ +L EP
Subjt: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
Query: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
T+ +A+ S + W A+ +EL SL +N TWSLV +P QK + KW+YK+K ++ PR+KARLVAKG+TQ+E VD+ E+FS VVRH+SIR++LS+
Subjt: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
Query: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
V F++ ++QMDVTTAFL+G LEE IYM PK EV G ED+VC LHKS+YGLK
Subjt: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
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| A0A5D3DNU1 Putative gag-pol polyprotein | 5.1e-120 | 37.35 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
+G+N C VKG GSV I DG ++IL VR+VP+LKRNLISLG LD++G KSENG++ VTK S+VKL GT + L +LE T+ + A
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTFNVGLFLSLLENTSSAAPPLFA
Query: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
G++ ++ + ++ L H+ E G L + L V V++ P C H +
Subjt: LATTANPPSQQQVGRIVEVCLPKKPSGLNVFVSSLVCLDLHLREIGVLMGILSFSTLSDVDVVQVPCGTEMDQKPPKCPKRCPVSPLCSHRLSQKDFMFE
Query: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
+ KS+R F + TK LDY+ SDLWGP + + GG+RYF++ +DDFS K+W+Y LK DE F
Subjt: DTIFCGVFDGQGPYDRFVARIVRDTLPIKLLSPQLCKSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFE
Query: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
KF+EWK VENQT RK+K LRTDNGLE+VN++F CK+ GI RH T TP QNGLAERFNRTI+ER
Subjt: KFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILERK-------------------------------
Query: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
WTG+ P+L HLRVFGC YA + KL R +C+F+GYP G+K YKLW ++ G +CIIS+DV+F+E MP+ Q + + D E
Subjt: ----------WTGRPPNLRHLRVFGCATYAPTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFE
Query: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
+ + S P I + P++ Q SE + ++Q + ++D EE L+ +L EP
Subjt: IDLLPSSSSPQIANSSSQPVLH-----QPSEEEVTETQTD--IVDTSQQAEEEGI----------------------------LLIISLREIDKGGRTEP
Query: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
T+ +A+ S + W A+ +EL SL +N TWSLV +P QK + KW+YK+K ++ PR+KARLVAKG+TQ+E VD+ E+FS VVRH+SIR++LS+
Subjt: NTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSL
Query: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
V F++ ++QMDVTTAFL+G LEE IYM PK EV G ED+VC LHKS+YGLK
Subjt: VVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEV-GGEDLVCHLHKSIYGLK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.0e-48 | 28.74 | Show/hide |
Query: LSPQLC------KSSRASF---RPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFEKFVEWKDFVENQTDRKIKLLR
LS ++C K +R F + T+I K L + SD+ GP T YF+ FVD F+ Y++K +VF F ++ E + K+ L
Subjt: LSPQLC------KSSRASF---RPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFEKFVEWKDFVENQTDRKIKLLR
Query: TDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILER-------------------------------------------KWTGRPPNLR
DNG EY+++ C GI HLT TP NG++ER RTI E+ W + P L+
Subjt: TDNGLEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILER-------------------------------------------KWTGRPPNLR
Query: HLRVFGCATYA--PTRQDKLQPRVKRCIFLGY-PHGIKAYKLWSLDPGKRRCIISKDVSFDE-----------DVMPWKFSSQTENRD------------
HLRVFG Y +Q K + + IF+GY P+G +KLW D + I+++DV DE + + K S ++EN++
Subjt: HLRVFGCATYA--PTRQDKLQPRVKRCIFLGY-PHGIKAYKLWSLDPGKRRCIISKDVSFDE-----------DVMPWKFSSQTENRD------------
Query: --------------KDLEGFEIDLLPSSSSPQI-------------------ANSSSQPVLHQ------------------PSEEEVTETQTDI--VDTS
KD + E P+ S I + S++ L++ P+E +ET + +
Subjt: --------------KDLEGFEIDLLPSSSSPQI-------------------ANSSSQPVLHQ------------------PSEEEVTETQTDI--VDTS
Query: QQAEEEGILLI------------ISLREIDKG-----------GRTEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKL
+ +GI +I IS E D PN++++ + W AI EL++ K NNTW++ KRP + VD +WV+ +
Subjt: QQAEEEGILLI------------ISLREIDKG-----------GRTEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKL
Query: KLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKSIYG
K N + + R+KARLVA+GFTQ+ +DY E F+ V R +S R +LSLV+Q+NL++ QMDV TAFL G L+E+IYM L P+ + D VC L+K+IYG
Subjt: KLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKSIYG
Query: LK
LK
Subjt: LK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.3e-75 | 36.04 | Show/hide |
Query: KSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFEKFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITL
K R SF+ S+ + LD + SD+ GP + + GG +YF+TF+DD S KLWVY+LKT D+VF+ F ++ VE +T RK+K LR+DNG EY + F
Subjt: KSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFEKFVEWKDFVENQTDRKIKLLRTDNGLEYVNDRFITL
Query: CKTSGIDRHLTTAGTPLQNGLAERFNRTIL-----------------------------------------ERKWTGRPPNLRHLRVFGCATYA---PTR
C + GI T GTP NG+AER NRTI+ ER WT + + HL+VFGC +A +
Subjt: CKTSGIDRHLTTAGTPLQNGLAERFNRTIL-----------------------------------------ERKWTGRPPNLRHLRVFGCATYA---PTR
Query: QDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFEIDLLPSSSSPQIANSSSQPVL---HQPSE----
+ KL + CIF+GY Y+LW DP K++ I S+DV F E + + ++ + F + + +S++P A S++ V QP E
Subjt: QDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWKFSSQTENRDKDLEGFEIDLLPSSSSPQIANSSSQPVL---HQPSE----
Query: EEVTETQTDIVDTSQQAEEEGILLIISLREIDKGGR------------TEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWV
E + + V+ Q EE+ L S R + R EP + + + + M A+ +E++SL++N T+ LV+ P G++ + CKWV
Subjt: EEVTETQTDIVDTSQQAEEEGILLIISLREIDKGGR------------TEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWV
Query: YKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKS
+KLK + D L R+KARLV KGF Q++ +D+ E+FS VV+ TSIR +LSL +LE++Q+DV TAFL+G LEE+IYM F G + +VC L+KS
Subjt: YKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDLVCHLHKS
Query: IYGLK
+YGLK
Subjt: IYGLK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.5e-04 | 35.44 | Show/hide |
Query: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTF
MGN + GIG + I+ G +LK+VR VP+L+ NLIS LD+ G+ N +TK S+V G + +
Subjt: MGNNQQCVVKGIGSVTIRLQDGSLKILKEVRFVPELKRNLISLGTLDKAGFGYKSENGLLTVTKDSVVKLTGTTTNSTF
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.5e-15 | 43.64 | Show/hide |
Query: RTEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRI
+ EP + A+K W A+ +ELD+L N TW LV P Q + CKWV+K KL+ D L R KARLVAKGF QEE + + E +S VVR +IR
Subjt: RTEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRI
Query: LLSLVVQFNL
+L++ Q +
Subjt: LLSLVVQFNL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.6e-44 | 27.48 | Show/hide |
Query: KLLSPQLC---KSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFEKFVEWKDFVENQTDRKIKLLRTDNG
K LS C KS++ F ST + L+YI SD+W + + +H RY++ FVD F+ W+Y LK +V E F+ +K+ +EN+ +I +DNG
Subjt: KLLSPQLC---KSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFEKFVEWKDFVENQTDRKIKLLRTDNG
Query: LEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILE-----------------------------------------RKWTGRPPNLRHLRVFG
E+V GI + TP NGL+ER +R I+E +K G PN LRVFG
Subjt: LEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILE-----------------------------------------RKWTGRPPNLRHLRVFG
Query: CATY---APTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWK--------------------------------------
CA Y P Q KL + ++C+FLGY AY L R IS+ V FDE+ P+
Subjt: CATY---APTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWK--------------------------------------
Query: ----------FSSQTENRDKDLEGFEIDLLPSSSSP-------------------------------------------QIANSSSQPVLHQPSEEEVTE
S R+ + +D SSS P Q+A S S P S T
Subjt: ----------FSSQTENRDKDLEGFEIDLLPSSSSP-------------------------------------------QIANSSSQPVLHQPSEEEVTE
Query: TQT--------------------DIVDTSQQA----------EEEGIL-------LIISLREIDKGGRTEPNTYNQAMKSQNSDLWMSAILKELDSLKEN
+ + IV+ + QA + GI+ L +SL +EP T QA+K + W +A+ E+++ N
Subjt: TQT--------------------DIVDTSQQA----------EEEGIL-------LIISLREIDKGGRTEPNTYNQAMKSQNSDLWMSAILKELDSLKEN
Query: NTWSLVKRPHGQ-KFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYM
+TW LV P V C+W++ K N D S L R+KARLVAKG+ Q +DY E FS V++ TSIRI+L + V + ++Q+DV AFL G L +D+YM
Subjt: NTWSLVKRPHGQ-KFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYM
Query: NLSPKFVEVGGEDLVCHLHKSIYGLK
+ P F++ + VC L K++YGLK
Subjt: NLSPKFVEVGGEDLVCHLHKSIYGLK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.8e-45 | 28.48 | Show/hide |
Query: KLLSPQLC---KSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFEKFVEWKDFVENQTDRKIKLLRTDNG
KLLS C KS + F ST + L+YI SD+W +S RY++ FVD F+ W+Y LK +V + F+ +K VEN+ +I L +DNG
Subjt: KLLSPQLC---KSSRASFRPSTYITKDKLDYIRSDLWGPARVSTHGGARYFLTFVDDFSIKLWVYMLKTIDEVFEKFVEWKDFVENQTDRKIKLLRTDNG
Query: LEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILE-----------------------------------------RKWTGRPPNLRHLRVFG
E+V R GI + TP NGL+ER +R I+E +K G+PPN L+VFG
Subjt: LEYVNDRFITLCKTSGIDRHLTTAGTPLQNGLAERFNRTILE-----------------------------------------RKWTGRPPNLRHLRVFG
Query: CATY---APTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWK-----FSSQTENRDKDLE--------------------
CA Y P + KL+ + K+C F+GY AY + G R S+ V FDE P+ S+ E R
Subjt: CATY---APTRQDKLQPRVKRCIFLGYPHGIKAYKLWSLDPGKRRCIISKDVSFDEDVMPWK-----FSSQTENRDKDLE--------------------
Query: -GFEIDL---------------------------LPSSSSP---------------QIANS-SSQPVLHQP---------------------SEEEVTET
G +D PSSS P Q NS S+ P+L+ P S +
Subjt: -GFEIDL---------------------------LPSSSSP---------------QIANS-SSQPVLHQP---------------------SEEEVTET
Query: QTDIVDTSQ---------------------QAEEEGILLIISLREIDKGG----------------RTEPNTYNQAMKSQNSDLWMSAILKELDSLKENN
T I + + Q + + S+ K G +EP T QAMK D W A+ E+++ N+
Subjt: QTDIVDTSQ---------------------QAEEEGILLIISLREIDKGG----------------RTEPNTYNQAMKSQNSDLWMSAILKELDSLKENN
Query: TWSLV-KRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYMN
TW LV P V C+W++ K N D S L R+KARLVAKG+ Q +DY E FS V++ TSIRI+L + V + ++Q+DV AFL G L +++YM+
Subjt: TWSLV-KRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILLSLVVQFNLELQQMDVTTAFLYGHLEEDIYMN
Query: LSPKFVEVGGEDLVCHLHKSIYGLK
P FV+ D VC L K+IYGLK
Subjt: LSPKFVEVGGEDLVCHLHKSIYGLK
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G03590.1 Protein phosphatase 2C family protein | 1.8e-08 | 65.79 | Show/hide |
Query: KDFMFEDTIFCGVFDGQGPYDRFVARIVRDTLPIKLLS
+DFM +D FCGVFDG GP+ VAR VRD+LP+KLLS
Subjt: KDFMFEDTIFCGVFDGQGPYDRFVARIVRDTLPIKLLS
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| AT4G03415.1 Protein phosphatase 2C family protein | 4.7e-09 | 72.22 | Show/hide |
Query: KDFMFEDTIFCGVFDGQGPYDRFVARIVRDTLPIKL
+DFM ED FCGVFDG GPY VAR VRDTLP+KL
Subjt: KDFMFEDTIFCGVFDGQGPYDRFVARIVRDTLPIKL
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| AT4G03415.2 Protein phosphatase 2C family protein | 4.7e-09 | 72.22 | Show/hide |
Query: KDFMFEDTIFCGVFDGQGPYDRFVARIVRDTLPIKL
+DFM ED FCGVFDG GPY VAR VRDTLP+KL
Subjt: KDFMFEDTIFCGVFDGQGPYDRFVARIVRDTLPIKL
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.0e-32 | 43.12 | Show/hide |
Query: EPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILL
EP+TYN+A + +W A+ E+ +++ +TW + P +K + CKWVYK+K N D + R+KARLVAKG+TQ+E +D+ E FS V + TS++++L
Subjt: EPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRILL
Query: SLVVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDL----VCHLHKSIYGLK
++ +N L Q+D++ AFL G L+E+IYM L P + G+ L VC+L KSIYGLK
Subjt: SLVVQFNLELQQMDVTTAFLYGHLEEDIYMNLSPKFVEVGGEDL----VCHLHKSIYGLK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8e-16 | 43.64 | Show/hide |
Query: RTEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRI
+ EP + A+K W A+ +ELD+L N TW LV P Q + CKWV+K KL+ D L R KARLVAKGF QEE + + E +S VVR +IR
Subjt: RTEPNTYNQAMKSQNSDLWMSAILKELDSLKENNTWSLVKRPHGQKFVDCKWVYKLKLNVDPSALPRFKARLVAKGFTQEEVVDYTEVFSLVVRHTSIRI
Query: LLSLVVQFNL
+L++ Q +
Subjt: LLSLVVQFNL
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