; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007937 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007937
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr9:8599711..8611813
RNA-Seq ExpressionLag0007937
SyntenyLag0007937
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCH50966.1 T4.5 [Malus x robusta]1.3e-3836.12Show/hide
Query:  NRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTL-LHTSPSPSSPSAPTQLSTVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQN
        NRL+I   +V  E    +   S  +   SP  ++P HP ++    L +      SSP+A  +      N+SP  I   +  +     A E  H   V  +
Subjt:  NRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTL-LHTSPSPSSPSAPTQLSTVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQN

Query:  VHIPAS-----TVNNHLMQTRAKLGPFKPKAFVST---------MTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ---------------------
           P        VN H M TRAK G  KPK F +T           T++P  PS++  ASK   W  AM  +F ALQ                       
Subjt:  VHIPAS-----TVNNHLMQTRAKLGPFKPKAFVST---------MTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ---------------------

Query:  -----------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLY
                         VAKGFHQ EG DFS+TF+PV K  TIR++L++A  Y W + QLDV N FLH HLK+  +M QPPGF+D S PHHV +L KSLY
Subjt:  -----------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLY

Query:  GRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR
        G KQAPRAW++ F + + +LGF++S +  S    R
Subjt:  GRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR

KAA0054997.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.8e-3843.61Show/hide
Query:  VHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVP------TDPSSYFVASKYQEWRSAMCEKFNALQEQ-----------------------------
        +H  A  +N H  QTR+K G  K K FV+   T +P       +PSSY  ASK   W++AM E+++AL +Q                             
Subjt:  VHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVP------TDPSSYFVASKYQEWRSAMCEKFNALQEQ-----------------------------

Query:  ---------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRA
                 VAKG+HQ EG DF +TF P+VKKPT+R++L+LA H++W L QLDVKN FLH  L+++ +M QP GF+DK+ P+ V +L KSLYG KQAPRA
Subjt:  ---------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRA

Query:  WFDRFTSYLFTLGFTASSAIHSYLYAR
        WF+ FT++L TLGF AS+  +S L+ R
Subjt:  WFDRFTSYLFTLGFTASSAIHSYLYAR

KAA0056830.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.2e-4453.66Show/hide
Query:  SPSPSSPSAPTQLSTVDTN-SSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQ
        SP P+ P+     S+  TN ++  + L+VS +       + ++  ++   N+H+P    N H MQTR K G FKPKAF   +TT++PT P+SY  ASKY 
Subjt:  SPSPSSPSAPTQLSTVDTN-SSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQ

Query:  EWRSAMCEKFNALQEQ---VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKS
        +W +AMCE+F+ALQ Q   +AKG+HQV+GFDF +TF+PVVKKPTIR+ILALAA Y WSLTQLDVKN FLHD L++  +MSQP GF DK+ P+HV  LHKS
Subjt:  EWRSAMCEKFNALQEQ---VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKS

Query:  LYGRK
        LYG K
Subjt:  LYGRK

KAA0066360.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.5e-4350.43Show/hide
Query:  VDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ
        +DTN++ Q  L++S       + D  +  ++   N+  P  + N H MQTRAK G FKPKAF   +TT++PT P+SY  ASKY EWR+AM E+FNALQ Q
Subjt:  VDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ

Query:  ---------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGR
                         KG+HQV+GFDF +TF+PVVKKPTIR+ILALAA Y WSLTQLDVKN FLH  L++  +M+QP GF DK+ P+HV  LHKSLYG 
Subjt:  ---------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGR

Query:  KQAPRAWFDRFTSYLFTLGFTASSAIHSYL
        KQAPR    +F      + F+A   I  YL
Subjt:  KQAPRAWFDRFTSYLFTLGFTASSAIHSYL

XP_022158189.1 uncharacterized protein LOC111024722 [Momordica charantia]1.7e-4342.86Show/hide
Query:  SPKPATPSHPNITPLFTLLHTSP----SPSSPSAPTQLSTVDTNSSPQEIL------HVSPS-SIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAK
        S  P   S  +I P F  +   P    S SS   PT ++T     +P  +L      H  P+ S   +++       S   +       +N HLMQT AK
Subjt:  SPKPATPSHPNITPLFTLLHTSP----SPSSPSAPTQLSTVDTNSSPQEIL------HVSPS-SIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAK

Query:  LGPFKPKAF-VSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ--------------------------------------VAKGFHQVEGFDFS
         G FKP+A+ V + + ++ T PS    A+++ EWR+AM +KF ALQEQ                                      +AKG+H++EGFDF 
Subjt:  LGPFKPKAF-VSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ--------------------------------------VAKGFHQVEGFDFS

Query:  KTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS
        +TF+PVVKKPTIRV+L+LAAH+ WSLTQLDVKN FLH +L+K  FM Q   F+D S P +V  LHKSLYG KQAPRAWFDRFT+YLFTLGF AS
Subjt:  KTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS

TrEMBL top hitse value%identityAlignment
A0A2N9FUJ5 Uncharacterized protein1.8e-4636.27Show/hide
Query:  NKGIPPSHWP---------ERDFLFTGW------------TINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSP--
        N G+P +HWP             LF G+            T +R+++   ++  E E  FL +        P   T +  +   L  L HT   PS P  
Subjt:  NKGIPPSHWP---------ERDFLFTGW------------TINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSP--

Query:  --SAPTQLSTVD------------TNSSPQEILHVSPSSIA---DLLADEQSHEH-----SVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSV
          S+   +S+ D            + S P   +  SP        +L   QS        S     HIP S+ N H M TR+K G FKPK F + +T   
Subjt:  --SAPTQLSTVD------------TNSSPQEILHVSPSSIA---DLLADEQSHEH-----SVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSV

Query:  PTDPSSYFVASKYQEWRSAMCEKFNALQEQ--------------------------------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILAL
         T+PS+Y  ASK+ +W +AM E+++ALQ Q                                      VAKGFHQ  G DF++TF+PVVK PT+R+ILAL
Subjt:  PTDPSSYFVASKYQEWRSAMCEKFNALQEQ--------------------------------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILAL

Query:  AAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR
        A  Y+W L QLDV N FLH  LK++ +M+QPPG+++   PHHV RLHKS+YG KQAPRAWF+ FT+ L TLGF +SSA  S    R
Subjt:  AAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR

A0A2N9IR41 Reverse transcriptase Ty1/copia-type domain-containing protein5.8e-4544.98Show/hide
Query:  SPKPAT-PSHPNITPLFTLLH-TSPSP-SSPSAPTQLSTVDTNS-SPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPK
        SP+P T P  P+ +P     H T P P  +P  P  L+T    S S   IL VSP+     LA+    E++   N   PA +++ H MQTR+K G  K K
Subjt:  SPKPAT-PSHPNITPLFTLLH-TSPSP-SSPSAPTQLSTVDTNS-SPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPK

Query:  AFVSTMTTS-VPTDPSSYFVASKYQEWRSAMCEKFNALQEQ--------------------------------------VAKGFHQVEGFDFSKTFNPVV
        +F ++ T   + T+P +Y +ASK+ +WR AM  +F ALQ Q                                      VAKGFHQ  G DF++TF+PVV
Subjt:  AFVSTMTTS-VPTDPSSYFVASKYQEWRSAMCEKFNALQEQ--------------------------------------VAKGFHQVEGFDFSKTFNPVV

Query:  KKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSA
        K PT+R+IL+LAA  QWSL QLDV N FLH  LK+  FM+QP GF+D S P HV  LHKSLYG KQAPRAWF+RFTS+L TLGF AS A
Subjt:  KKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSA

A0A2N9IV19 Uncharacterized protein5.8e-4538.46Show/hide
Query:  TINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDT-----------NSSPQEILHVSPSSIADLLA
        T  R++I   ++  E E  FL +   S     +P T +  ++  L  ++HT  SP+  S+ T L T++T             SP  IL  +  S +D + 
Subjt:  TINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDT-----------NSSPQEILHVSPSSIADLLA

Query:  DEQSHEHSV----FQNVHIP-ASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ------------------
           S   S       +  IP    VN H M TR+K G FKPK F +T      T+P ++ +ASKY  W +AM E+F ALQ Q                  
Subjt:  DEQSHEHSV----FQNVHIP-ASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ------------------

Query:  --------------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHK
                            VAKGFHQ  G DF +TF+PVVK PT+R+ILALA  Y W L QLDV+N FLH  LK++ +M+QPPG+++ S P HV +LHK
Subjt:  --------------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHK

Query:  SLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR
        S+YG KQAPRAWF+ FT+ L  LGF +SSA  S    R
Subjt:  SLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR

A0A2N9J6E3 Uncharacterized protein5.8e-4538.46Show/hide
Query:  TINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDT-----------NSSPQEILHVSPSSIADLLA
        T  R++I   ++  E E  FL +   S     +P T +  ++  L  ++HT  SP+  S+ T L T++T             SP  IL  +  S +D + 
Subjt:  TINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDT-----------NSSPQEILHVSPSSIADLLA

Query:  DEQSHEHSV----FQNVHIP-ASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ------------------
           S   S       +  IP    VN H M TR+K G FKPK F +T      T+P ++ +ASKY  W +AM E+F ALQ Q                  
Subjt:  DEQSHEHSV----FQNVHIP-ASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQ------------------

Query:  --------------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHK
                            VAKGFHQ  G DF +TF+PVVK PT+R+ILALA  Y W L QLDV+N FLH  LK++ +M+QPPG+++ S P HV +LHK
Subjt:  --------------------VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHK

Query:  SLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR
        S+YG KQAPRAWF+ FT+ L  LGF +SSA  S    R
Subjt:  SLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYAR

A0A5D3BLP0 Putative mitochondrial protein5.8e-4553.66Show/hide
Query:  SPSPSSPSAPTQLSTVDTN-SSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQ
        SP P+ P+     S+  TN ++  + L+VS +       + ++  ++   N+H+P    N H MQTR K G FKPKAF   +TT++PT P+SY  ASKY 
Subjt:  SPSPSSPSAPTQLSTVDTN-SSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQ

Query:  EWRSAMCEKFNALQEQ---VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKS
        +W +AMCE+F+ALQ Q   +AKG+HQV+GFDF +TF+PVVKKPTIR+ILALAA Y WSLTQLDVKN FLHD L++  +MSQP GF DK+ P+HV  LHKS
Subjt:  EWRSAMCEKFNALQEQ---VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKS

Query:  LYGRK
        LYG K
Subjt:  LYGRK

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.1e-1139.45Show/hide
Query:  VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYL
        VA+GF Q    D+ +TF PV +  + R IL+L   Y   + Q+DVK  FL+  LK++ +M  P G    S   +V +L+K++YG KQA R WF+ F   L
Subjt:  VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYL

Query:  FTLGFTASS
            F  SS
Subjt:  FTLGFTASS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-1950Show/hide
Query:  VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYL
        V KGF Q +G DF + F+PVVK  +IR IL+LAA     + QLDVK  FLH  L+++ +M QP GF      H V +L+KSLYG KQAPR W+ +F S++
Subjt:  VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYL

P42795 60S ribosomal protein L11-12.4e-1186.84Show/hide
Query:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI
        MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Subjt:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.6e-2931.62Show/hide
Query:  SESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPF
        + SS + S    T   P+            S SSPS  T  S+  T+ +P  IL   P  +A ++ +                + +N H M TRAK G  
Subjt:  SESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPF

Query:  KPKAFVS-TMTTSVPTDPSSYFVASKYQEWRSAMCEKFNA---------------------------------------LQEQVAKGFHQVEGFDFSKTF
        KP    S  ++ +  ++P +   A K + WR+AM  + NA                                           VAKG++Q  G D+++TF
Subjt:  KPKAFVS-TMTTSVPTDPSSYFVASKYQEWRSAMCEKFNA---------------------------------------LQEQVAKGFHQVEGFDFSKTF

Query:  NPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS
        +PV+K  +IR++L +A    W + QLDV N FL   L    +MSQPPGF+DK  P++V +L K+LYG KQAPRAW+    +YL T+GF  S
Subjt:  NPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.6e-2833.67Show/hide
Query:  EPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLM
        +P +    NS S   ++P P +PS PN     + L  SP  SSP  PT  +++   +SP      S S+    L         +  N   P   VN H M
Subjt:  EPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLSTVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLM

Query:  QTRAKLGPFKPKAFVSTMTT-SVPTDPSSYFVASKYQEWRSAMCEKFNA---------------------------------------LQEQVAKGFHQV
         TRAK G  KP    S  T+ +  ++P +   A K   WR AM  + NA                                           VAKG++Q 
Subjt:  QTRAKLGPFKPKAFVSTMTT-SVPTDPSSYFVASKYQEWRSAMCEKFNA---------------------------------------LQEQVAKGFHQV

Query:  EGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS
         G D+++TF+PV+K  +IR++L +A    W + QLDV N FL   L  + +MSQPPGF+DK  P +V RL K++YG KQAPRAW+    +YL T+GF  S
Subjt:  EGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTAS

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A1.7e-1286.84Show/hide
Query:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI
        MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Subjt:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI

AT3G58700.1 Ribosomal L5P family protein1.7e-1286.84Show/hide
Query:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI
        MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Subjt:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI

AT4G18730.1 ribosomal protein L16B1.7e-1286.84Show/hide
Query:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI
        MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Subjt:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.2e-2044.07Show/hide
Query:  VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFL----DKSSPHHVFRLHKSLYGRKQAPRAWFDRF
        VAKG+ Q EG DF +TF+PV K  ++++ILA++A Y ++L QLD+ N FL+  L ++ +M  PPG+     D   P+ V  L KS+YG KQA R WF +F
Subjt:  VAKGFHQVEGFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKK-FMSQPPGFL----DKSSPHHVFRLHKSLYGRKQAPRAWFDRF

Query:  TSYLFTLGFTASSAIHSY
        +  L   GF  S + H+Y
Subjt:  TSYLFTLGFTASSAIHSY

AT5G45775.1 Ribosomal L5P family protein1.7e-1286.84Show/hide
Query:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI
        MQLLESGLKVKEY +  RNFSDT CFGFGIQEHIDLGI
Subjt:  MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTTTTGGAAAGTGGGTTGAAGGTTAAGGAGTACTCGATGTTTTGCAGGAACTTCAGTGACACTCGATGTTTTGGCTTTGGTATTCAAGAGCACATTGATCTTGG
AATCAACTCCGGTGGCCGGCCGCCACCGGCTGCCGTGATGCTGAGGAGGAAGTTTTATCCCACTGCCACAAAGTGTGAGTCATTTAGTGCCATGGTTTGTACTGACCTAC
CATCAAATTTTGTAGGTGATGAGGATTACTGCGAACCGGGTGATGCTGAGGAAGAGTGTTTGGCAATTCCAGTGTCTACAGTTGCTTCTGAGTCTACATTAAGTACTGGT
GGAAGAGTGATAGATCCTTTTCGCTCCACATTGGCTCTATCCACAGTTGAGGCACTTATTTGTGCACAAAATTTGTTACGTTCTAATGCTATCAATATTGATCTTCAATC
ACATTTGGAAGAAATTTCTCGCTTTGAAGAAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTAAATCCGTGGACACAGAAAATATGTCTGCAG
TGAGAATAGTGCAACTGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATATAGACGTATTGATCCAAGGCGTCCATGTAGGA
GACATGCGAGCGGGGATATCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATAGTAAACCACTAGATGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGA
GAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCACTAGTACTTAAGGAGCCAGAGGAGGTGTTCTTGAAGAATTCAGAGTCGTCAGACG
ACGATTCTCCAAAACCTGCCACACCTTCTCATCCTAACATAACACCCTTATTCACCCTTTTACATACATCTCCAAGCCCATCTTCACCTTCCGCACCTACCCAATTATCC
ACTGTTGACACTAATTCTTCTCCTCAAGAGATTTTGCATGTTTCACCTTCTAGTATTGCAGATTTACTAGCAGATGAGCAATCTCATGAGCATTCAGTATTCCAAAATGT
TCACATTCCTGCAAGCACTGTCAATAATCATCTGATGCAAACACGAGCTAAGTTAGGACCTTTCAAGCCAAAGGCGTTTGTCTCCACCATGACCACTTCAGTTCCAACAG
ATCCTTCTTCATATTTTGTTGCATCGAAGTATCAAGAATGGAGATCCGCTATGTGTGAGAAATTTAATGCCCTTCAGGAACAAGTTGCTAAAGGATTTCATCAGGTCGAA
GGGTTTGACTTTAGTAAAACCTTCAATCCAGTTGTTAAAAAGCCCACAATCAGAGTTATCCTCGCTCTTGCTGCTCATTATCAATGGTCTTTAACTCAATTGGATGTAAA
GAATGGTTTTCTACACGACCACTTAAAGAAGAAGTTTATGTCTCAACCACCTGGCTTTCTTGACAAATCCAGTCCACATCATGTTTTTCGCCTTCATAAAAGTCTATATG
GTCGAAAGCAAGCTCCTCGAGCTTGGTTCGATCGCTTTACATCATATCTATTCACCTTGGGATTTACTGCTTCTTCTGCGATTCATTCTTATTTGTACGCTCGGTTGGAT
CTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTTTTGGAAAGTGGGTTGAAGGTTAAGGAGTACTCGATGTTTTGCAGGAACTTCAGTGACACTCGATGTTTTGGCTTTGGTATTCAAGAGCACATTGATCTTGG
AATCAACTCCGGTGGCCGGCCGCCACCGGCTGCCGTGATGCTGAGGAGGAAGTTTTATCCCACTGCCACAAAGTGTGAGTCATTTAGTGCCATGGTTTGTACTGACCTAC
CATCAAATTTTGTAGGTGATGAGGATTACTGCGAACCGGGTGATGCTGAGGAAGAGTGTTTGGCAATTCCAGTGTCTACAGTTGCTTCTGAGTCTACATTAAGTACTGGT
GGAAGAGTGATAGATCCTTTTCGCTCCACATTGGCTCTATCCACAGTTGAGGCACTTATTTGTGCACAAAATTTGTTACGTTCTAATGCTATCAATATTGATCTTCAATC
ACATTTGGAAGAAATTTCTCGCTTTGAAGAAGCTGGTGTTACGGACACTCGTGAAGGACTAACTAGTCGATATTGGTCTAAATCCGTGGACACAGAAAATATGTCTGCAG
TGAGAATAGTGCAACTGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATATAGACGTATTGATCCAAGGCGTCCATGTAGGA
GACATGCGAGCGGGGATATCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATAGTAAACCACTAGATGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGA
GAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGGTTGTTCATTAGAGGAGCACTAGTACTTAAGGAGCCAGAGGAGGTGTTCTTGAAGAATTCAGAGTCGTCAGACG
ACGATTCTCCAAAACCTGCCACACCTTCTCATCCTAACATAACACCCTTATTCACCCTTTTACATACATCTCCAAGCCCATCTTCACCTTCCGCACCTACCCAATTATCC
ACTGTTGACACTAATTCTTCTCCTCAAGAGATTTTGCATGTTTCACCTTCTAGTATTGCAGATTTACTAGCAGATGAGCAATCTCATGAGCATTCAGTATTCCAAAATGT
TCACATTCCTGCAAGCACTGTCAATAATCATCTGATGCAAACACGAGCTAAGTTAGGACCTTTCAAGCCAAAGGCGTTTGTCTCCACCATGACCACTTCAGTTCCAACAG
ATCCTTCTTCATATTTTGTTGCATCGAAGTATCAAGAATGGAGATCCGCTATGTGTGAGAAATTTAATGCCCTTCAGGAACAAGTTGCTAAAGGATTTCATCAGGTCGAA
GGGTTTGACTTTAGTAAAACCTTCAATCCAGTTGTTAAAAAGCCCACAATCAGAGTTATCCTCGCTCTTGCTGCTCATTATCAATGGTCTTTAACTCAATTGGATGTAAA
GAATGGTTTTCTACACGACCACTTAAAGAAGAAGTTTATGTCTCAACCACCTGGCTTTCTTGACAAATCCAGTCCACATCATGTTTTTCGCCTTCATAAAAGTCTATATG
GTCGAAAGCAAGCTCCTCGAGCTTGGTTCGATCGCTTTACATCATATCTATTCACCTTGGGATTTACTGCTTCTTCTGCGATTCATTCTTATTTGTACGCTCGGTTGGAT
CTTCTTTGA
Protein sequenceShow/hide protein sequence
MQLLESGLKVKEYSMFCRNFSDTRCFGFGIQEHIDLGINSGGRPPPAAVMLRRKFYPTATKCESFSAMVCTDLPSNFVGDEDYCEPGDAEEECLAIPVSTVASESTLSTG
GRVIDPFRSTLALSTVEALICAQNLLRSNAINIDLQSHLEEISRFEEAGVTDTREGLTSRYWSKSVDTENMSAVRIVQLDKAGYLILVTLCDTARFVFDIDVLIQGVHVG
DMRAGISYAMSLHKTGPRNSKPLDVLNKGIPPSHWPERDFLFTGWTINRLFIRGALVLKEPEEVFLKNSESSDDDSPKPATPSHPNITPLFTLLHTSPSPSSPSAPTQLS
TVDTNSSPQEILHVSPSSIADLLADEQSHEHSVFQNVHIPASTVNNHLMQTRAKLGPFKPKAFVSTMTTSVPTDPSSYFVASKYQEWRSAMCEKFNALQEQVAKGFHQVE
GFDFSKTFNPVVKKPTIRVILALAAHYQWSLTQLDVKNGFLHDHLKKKFMSQPPGFLDKSSPHHVFRLHKSLYGRKQAPRAWFDRFTSYLFTLGFTASSAIHSYLYARLD
LL