CuGenDBv2

Gene ID	Lag0007941
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Gag/pol protein
Genome location	chr9:8717805..8729561
RNA-Seq Expression	Lag0007941
Synteny	Lag0007941
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]

3.5e-34

86.52

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Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL
        RKFL DLEVVPNMNL I LYCDNSGAVANSKEPRSHK+GKHI+ KY+LI EIVQRGDVIVTKIA EHNI DPFTK L+AKVFEGHLESL
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL

KAA0058279.1 gag/pol protein [Cucumis melo var. makuwa]

8.3e-36

87.64

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Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL
        RKFL DLEVVPNMNL I LYCDNSGAVANSKEPRSHK+GKHI+ KY+LIWEIVQRGDVIVTKIA EHNI DPFTK L+AKVFEGHLESL
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]

4.1e-35

70.59

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Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESLESGCLGIWMPV
        RKFL DLEVVPNMNL I LYCDNSGAVANSKEPRSHK+GKHI+ KY+LI EIVQRGDVIVTKIA EHNI DPFTK L+AKVFEGHLESL    + I +P 
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESLESGCLGIWMPV

Query:  FVALELGWNEPDAYVWGAG
          +   G    D   W AG
Subjt:  FVALELGWNEPDAYVWGAG

KAA0062410.1 gag/pol protein [Cucumis melo var. makuwa]

2.7e-34

86.52

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Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL
        RKFL DLEVVPNMNLSI LYCDNSG VANSKEPRSHK+GKHI+ KY+LI EIVQRGDVIVTKI LEHNIVDPF K L+AKVFEGHLESL
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL

TYK10337.1 gag/pol protein [Cucumis melo var. makuwa]

1.2e-34

87.64

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Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL
        RKFL DLEVVPNMNL I LYCDNSGAVANSKEPRSHK+GKHI+ KY+LI EIVQRGDVIVTKIA EHNIVDPFTK L+AKVFEGHLESL
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TZD0 Gag/pol protein

1.7e-34

86.52

Show/hide

Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL
        RKFL DLEVVPNMNL I LYCDNSGAVANSKEPRSHK+GKHI+ KY+LI EIVQRGDVIVTKIA EHNI DPFTK L+AKVFEGHLESL
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL

A0A5A7UXM9 Gag/pol protein

4.0e-36

87.64

Show/hide

Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL
        RKFL DLEVVPNMNL I LYCDNSGAVANSKEPRSHK+GKHI+ KY+LIWEIVQRGDVIVTKIA EHNI DPFTK L+AKVFEGHLESL
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL

A0A5A7UYE8 Gag/pol protein

2.0e-35

70.59

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Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESLESGCLGIWMPV
        RKFL DLEVVPNMNL I LYCDNSGAVANSKEPRSHK+GKHI+ KY+LI EIVQRGDVIVTKIA EHNI DPFTK L+AKVFEGHLESL    + I +P 
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESLESGCLGIWMPV

Query:  FVALELGWNEPDAYVWGAG
          +   G    D   W AG
Subjt:  FVALELGWNEPDAYVWGAG

A0A5D3CEF2 Gag/pol protein

5.8e-35

87.64

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Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL
        RKFL DLEVVPNMNL I LYCDNSGAVANSKEPRSHK+GKHI+ KY+LI EIVQRGDVIVTKIA EHNIVDPFTK L+AKVFEGHLESL
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL

A0A5D3DS50 Gag/pol protein

1.3e-34

86.52

Show/hide

Query:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL
        RKFL DLEVVPNMNLSI LYCDNSG VANSKEPRSHK+GKHI+ KY+LI EIVQRGDVIVTKI LEHNIVDPF K L+AKVFEGHLESL
Subjt:  RKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESL

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

1.3e-04

30.56

Show/hide

Query:  KKKGTVKKKKKEERENLLVKQQRKFLTDLEVVPNMNLS----IALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFT
        K++ +V     E     L +  R+ L    ++ ++N+     I +Y DN G ++ +  P  HK+ KHID KY+   E VQ   + +  I  E+ + D FT
Subjt:  KKKGTVKKKKKEERENLLVKQQRKFLTDLEVVPNMNLS----IALYCDNSGAVANSKEPRSHKQGKHIDWKYYLIWEIVQRGDVIVTKIALEHNIVDPFT

Query:  KALSAKVF
        K L A  F
Subjt:  KALSAKVF

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTGTTGCCTATGGAGGAACGTCAATTTCACGAACCTCGACTCAGAACTCGCCGAAAAATGCCCTTCTTCCAAGACCCATGCCGCACAACAACTAAACGTCGACTGCTT
GAGACCCACACGCGCACTGTTGCCGAAACTGAGAGGCAAAAGGGAAACGAACCTACACCGAAAGCATCGCGAGAATGTCGTCGTCACCGCTGGAGCTCACACTAAATCGA
CGCCTGCACAGCTGCACCGGGAAGGAGATGTTCTGTCGGCCTTTGTTGCAGTGGACAACGCGAGAGGGGGAGACAAACCAGTGGGAGAAGCCCAAATCGAAGGGGACACC
GTCGAAGTGGGTATTCTTGTTGCCACTGTATGTACTGATTTGAGAAGTGGGTGTTCTCCGCCGTCGAAGTCGAAGGAAGATAGTGACGTACGTGGGTCTCGCACTGTTAT
AATGGGTTATTCCAGATCTGGTCGTTTGAGATCTGCCCACGTGATCTGCTCATGGGTTTCAAGATCTGGCCGTTCGAGATCTGCTCACGTTCTTGGGGGGATGTATATTT
GGGTTGGCTACCCAGAAAGAATAGAGAACGAGATGGAGGGGGGAGAGAGGTGGCTGCGACGTGGGTCTCTGCTCGTCGGAAAATATACAGACGAAGGGAAGAAACTTTTC
GTGTTGGCTAGCTGGAAAGAAGAGACGTGGAAGGGGGTGGCACTACGACGGTTGATTAAAGAAAAGGAAAAAAAAAGAGGTTCGCCGACGGTAGTTGGAAAAACGGCCGA
CGACGTCACCAGCGCTGGTGGCTGGAAGAAGAAAGGGACTGTGAAAAAGAAGAAGAAGGAGGAGAGAGAGAATCTACTTGTGAAGCAGCAAAGGAAGTTCTTAACAGATT
TGGAAGTTGTTCCAAATATGAACTTGTCCATAGCATTATACTGTGACAACAGTGGGGCTGTAGCCAATTCTAAAGAACCTCGTAGCCACAAACAAGGAAAACACATCGAT
TGGAAGTATTACCTGATATGGGAGATTGTGCAACGAGGGGATGTGATTGTTACCAAGATCGCTTTGGAGCACAACATTGTTGATCCATTTACAAAGGCTCTCTCAGCTAA
AGTGTTCGAGGGTCATCTAGAGAGTCTAGAATCTGGATGTCTGGGAATCTGGATGCCTGTGTTTGTTGCGCTGGAATTGGGCTGGAATGAACCTGATGCCTATGTTTGGG
GTGCAGGGTTGGAATTGGGCTGGAATTTAGTTTTGTTTTATTATTCCCATGGGAATGTTTTTCTGGAATCTGGATGTCTTGGAATCTGGATGCATGTGTTTGTTGCGCTG
GAATTGGGCTGGAATGAACCTGATGCCTGTGTTTGGGGTGCAGGGTTGGAATTGGGCTGGAATTTAGTTTTGTTTTATTGCGGCAAGAGAGAGGGGACGAACCTCTCAAG
CGGCAAGAGAGAGAGGAAAGGGCTTCTCAAGCGGCAAGCGCCTGGAAGAGGGCCAAATCACAGATCGACGGTGAAAAACCTCGGTGGAAAAGACGGATCGATAAGTATAT
GGCAAAGGAACTTCAGATCCGTAGAAACTCATCTCGCGTGTGGAGAAAGAGAGAGTTTCGAAGAAGAAAACCGAGGAAGAAGGTCGAAAAAGGCGAAAAAAACCCCTGAC
CACATCAACGCCGAAGGAGTCGACAGAGTAGACGGATTGACGACCATGCAAGCTCAGAGAGGGATGAGAGACGGAGGAATCAGTCGACGCAACGGCGTTGAGGGTGGGAG
ACGAAGAGATCAGAGAACAAAGTGA

mRNA sequence

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Protein sequence

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MCCLWRNVNFTNLDSELAEKCPSSKTHAAQQLNVDCLRPTRALLPKLRGKRETNLHRKHRENVVVTAGAHTKSTPAQLHREGDVLSAFVAVDNARGGDKPVGEAQIEGDT
VEVGILVATVCTDLRSGCSPPSKSKEDSDVRGSRTVIMGYSRSGRLRSAHVICSWVSRSGRSRSAHVLGGMYIWVGYPERIENEMEGGERWLRRGSLLVGKYTDEGKKLF
VLASWKEETWKGVALRRLIKEKEKKRGSPTVVGKTADDVTSAGGWKKKGTVKKKKKEERENLLVKQQRKFLTDLEVVPNMNLSIALYCDNSGAVANSKEPRSHKQGKHID
WKYYLIWEIVQRGDVIVTKIALEHNIVDPFTKALSAKVFEGHLESLESGCLGIWMPVFVALELGWNEPDAYVWGAGLELGWNLVLFYYSHGNVFLESGCLGIWMHVFVAL
ELGWNEPDACVWGAGLELGWNLVLFYCGKREGTNLSSGKRERKGLLKRQAPGRGPNHRSTVKNLGGKDGSISIWQRNFRSVETHLACGERESFEEENRGRRSKKAKKTPD
HINAEGVDRVDGLTTMQAQRGMRDGGISRRNGVEGGRRRDQRTK

Lag0007941 (gene) of Sponge gourd (AG-4) v1 genome