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Lag0007942 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007942
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr9:8752261..8755493
RNA-Seq ExpressionLag0007942
SyntenyLag0007942
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]8.2e-0632.63Show/hide
Query:  VALEASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDIIKV
        V   A P NCWK+N D++W +  +  GIGW + D  G +V  G  + +   EI  LE++ I+ G       L  I     SP+ ++S+S ++I++
Subjt:  VALEASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDIIKV

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]1.4e-0536.47Show/hide
Query:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDII
        N WK+N D+ W   + T GIGW +RD  G ++  GC+  +    I +LEV+AI EGL         IR     P+ ++S+S + I
Subjt:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDII

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]1.4e-0536.47Show/hide
Query:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDII
        N WK+N D+ W   + T GIGW +RD  G ++  GC+  +    I +LEV+AI EGL         IR     P+ ++S+S + I
Subjt:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDII

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]4.8e-0637.08Show/hide
Query:  EASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDI
        E  P++ W +N D++W DS+   GIGW IR   G +V  G +  +  + +K LE  AI+EGL  LT NL ++R     PL ++++S+++
Subjt:  EASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDI

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]6.9e-0533.72Show/hide
Query:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKL-TSNLSIIRDGFMSPLVVKSNSSDII
        N WK+N D+ W   + T GIGW +RD  G ++   C+  +    I +LEV+AI EGL  +   +   I+     P+ ++S+S + I
Subjt:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKL-TSNLSIIRDGFMSPLVVKSNSSDII

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132164.0e-0632.63Show/hide
Query:  VALEASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDIIKV
        V   A P NCWK+N D++W +  +  GIGW + D  G +V  G  + +   EI  LE++ I+ G       L  I     SP+ ++S+S ++I++
Subjt:  VALEASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDIIKV

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X16.8e-0636.47Show/hide
Query:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDII
        N WK+N D+ W   + T GIGW +RD  G ++  GC+  +    I +LEV+AI EGL         IR     P+ ++S+S + I
Subjt:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDII

A0A6J1DNV9 uncharacterized protein LOC1110224032.3e-0637.08Show/hide
Query:  EASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDI
        E  P++ W +N D++W DS+   GIGW IR   G +V  G +  +  + +K LE  AI+EGL  LT NL ++R     PL ++++S+++
Subjt:  EASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDI

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X26.8e-0636.47Show/hide
Query:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDII
        N WK+N D+ W   + T GIGW +RD  G ++  GC+  +    I +LEV+AI EGL         IR     P+ ++S+S + I
Subjt:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNLSIIRDGFMSPLVVKSNSSDII

A0A6J1DSV1 uncharacterized protein LOC1110236083.4e-0533.72Show/hide
Query:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKL-TSNLSIIRDGFMSPLVVKSNSSDII
        N WK+N D+ W   + T GIGW +RD  G ++   C+  +    I +LEV+AI EGL  +   +   I+     P+ ++S+S + I
Subjt:  NCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKL-TSNLSIIRDGFMSPLVVKSNSSDII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTGGGTATGTGTGCGGAGCATGATGCGGAAATCACATGTGGGTGTGAGTGCGGAGCGTGACGCGAAAATCACGTGTGAGTTACTTACCAGTACGGTGGTTGTACT
GATACCCCCCCCCTTCTTCCGCCAACATTTTCAGATTATGCAGGTGATGAGCTTTATGTGTCCGGTGATGTGGATGAGGAGGATTGTAGCTCTAACATTGATTGTGAATA
CGAGACCTGACTCGTACTGTGTTGTGAAGTTGAATTCTAATATGTTGAAGTTAGATGGAGTAGTCGGAAATAATATGAGTTTGACTCTCTCCCAACGCTATTATATGGGC
GTGCCACCAGTTTCAAATCTCGTTGCTAGCTACAGTGTCGCCACCGTCTGCCAAGCTTGCTGCCATTTTTTAGCTATTTTTCGCCTACTGCAAGACAGAGAACCAACAAA
GTCAGTTGCATTGGAGGCCTCGCCAATCAATTGTTGGAAAATCAATTTTGATTCCACGTGGTACGATTCCTCTAAAACAAGAGGGATTGGGTGGGCAATCCGTGACTCCC
TGGGTTCTTTGGTCGGAGTTGGTTGCAAAAGAACGAAGAATGTTAGTGAGATTAAATGGCTGGAAGTGTTGGCCATTGTCGAAGGTCTCAATAAGCTTACCAGTAATTTA
AGCATCATCAGAGATGGATTCATGTCGCCACTGGTTGTAAAATCGAACTCCAGCGACATCATTAAAGTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTGGGTATGTGTGCGGAGCATGATGCGGAAATCACATGTGGGTGTGAGTGCGGAGCGTGACGCGAAAATCACGTGTGAGTTACTTACCAGTACGGTGGTTGTACT
GATACCCCCCCCCTTCTTCCGCCAACATTTTCAGATTATGCAGGTGATGAGCTTTATGTGTCCGGTGATGTGGATGAGGAGGATTGTAGCTCTAACATTGATTGTGAATA
CGAGACCTGACTCGTACTGTGTTGTGAAGTTGAATTCTAATATGTTGAAGTTAGATGGAGTAGTCGGAAATAATATGAGTTTGACTCTCTCCCAACGCTATTATATGGGC
GTGCCACCAGTTTCAAATCTCGTTGCTAGCTACAGTGTCGCCACCGTCTGCCAAGCTTGCTGCCATTTTTTAGCTATTTTTCGCCTACTGCAAGACAGAGAACCAACAAA
GTCAGTTGCATTGGAGGCCTCGCCAATCAATTGTTGGAAAATCAATTTTGATTCCACGTGGTACGATTCCTCTAAAACAAGAGGGATTGGGTGGGCAATCCGTGACTCCC
TGGGTTCTTTGGTCGGAGTTGGTTGCAAAAGAACGAAGAATGTTAGTGAGATTAAATGGCTGGAAGTGTTGGCCATTGTCGAAGGTCTCAATAAGCTTACCAGTAATTTA
AGCATCATCAGAGATGGATTCATGTCGCCACTGGTTGTAAAATCGAACTCCAGCGACATCATTAAAGTCAATTAA
Protein sequenceShow/hide protein sequence
MCWVCVRSMMRKSHVGVSAERDAKITCELLTSTVVVLIPPPFFRQHFQIMQVMSFMCPVMWMRRIVALTLIVNTRPDSYCVVKLNSNMLKLDGVVGNNMSLTLSQRYYMG
VPPVSNLVASYSVATVCQACCHFLAIFRLLQDREPTKSVALEASPINCWKINFDSTWYDSSKTRGIGWAIRDSLGSLVGVGCKRTKNVSEIKWLEVLAIVEGLNKLTSNL
SIIRDGFMSPLVVKSNSSDIIKVN