; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007947 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007947
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:8854268..8856155
RNA-Seq ExpressionLag0007947
SyntenyLag0007947
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015380705.1 uncharacterized protein LOC107174377 [Citrus sinensis]1.6e-1527.6Show/hide
Query:  LEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFR-RKNRLEDILD---
        + +L  W++   KG  K +  +  +  +   +         ++R +R ++N+L +EE YWK R   DWLK  D+NTK+FH  A+ R RKNR+  I D   
Subjt:  LEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFR-RKNRLEDILD---

Query:  ----------------------------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNG--------VHAMLKKVLGSIISST
                                    +++   +E I+  + +E   ++ +P++  EI   L  M P KA GP+G        +   LK +L  +IS T
Subjt:  ----------------------------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNG--------VHAMLKKVLGSIISST

Query:  QSAFVLSRLVSDNVVARFECIHAINSRRKE---CIAERLEGANSVLQQNW
        QSAF+ +RL++DN++  +EC+H I   ++E    +A +L+ + +  +  W
Subjt:  QSAFVLSRLVSDNVVARFECIHAINSRRKE---CIAERLEGANSVLQQNW

XP_023912060.1 uncharacterized protein LOC112023667 [Quercus suber]1.6e-1529.09Show/hide
Query:  AHAASCLEKLMSWNKARLKGSIKTVISIKEKEIQAL--LNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFH-TGANFRRKNRL
        A   +C ++L  WNK  + G I   +  +++++  L  LN  +++ E  ++R  +E+  L+D+E   W  R +  W++ GDRNTK+FH T    RRKN +
Subjt:  AHAASCLEKLMSWNKARLKGSIKTVISIKEKEIQAL--LNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFH-TGANFRRKNRL

Query:  EDILDD-----RVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM-----------------LKKVLGSIISSTQSAFVLSRL
          + DD        ++ + +   +  E    +   +   E+   L+ M+P+K+ GP+    +                 LK++L  +IS++QSAF+  +L
Subjt:  EDILDD-----RVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM-----------------LKKVLGSIISSTQSAFVLSRL

Query:  VSDNVVARFECIHAINSRRK
        ++DNV+  FE +H IN RRK
Subjt:  VSDNVVARFECIHAINSRRK

XP_030498017.1 uncharacterized protein LOC115713672 [Cannabis sativa]6.0e-1530.92Show/hide
Query:  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNV-ANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRKNR--------
        C ++L +WNK++  GSI  ++   +K++  LL+V A   +   V+R E +L +LL  EE YWKLR + DWL  GDRNTK+FH  A  R+K          
Subjt:  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNV-ANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRKNR--------

Query:  -------LEDILDD--------------RVKIIMEGISH---SIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM------------------
                EDI+ +               V+ +  GIS    SI  E+   ++ P+++ ++   +K +   KA GP+G HA+                  
Subjt:  -------LEDILDD--------------RVKIIMEGISH---SIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM------------------

Query:  -------------LKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAI
                     LK  L  +ISS QSAFV  R + DNV+  FE +H++
Subjt:  -------------LKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAI

XP_042958006.1 uncharacterized protein LOC122293492 [Carya illinoinensis]4.1e-1629.34Show/hide
Query:  WNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILDD--------
        W+K + + + K V   K K +Q L    +      +R+   EL  LL++E+ +WK R K +W K GDRNTK+FH  AN RRK N + ++ DD        
Subjt:  WNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILDD--------

Query:  -----------------------RVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNG-----VHAMLKKVLGSIISSTQSAFVLSRL
                                ++  + G+   + E     + + ++ VE+E  +K M P+KA GP+G       A  K  L  IIS  QSAF+  RL
Subjt:  -----------------------RVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNG-----VHAMLKKVLGSIISSTQSAFVLSRL

Query:  VSDNVVARFECIHAINSRRKE---CIAERLEGANSVLQQNWE
        ++DN++  +E +H++ +R+KE    +A +L+ + +  +  W+
Subjt:  VSDNVVARFECIHAINSRRKE---CIAERLEGANSVLQQNWE

XP_042980184.1 uncharacterized protein LOC122310355 [Carya illinoinensis]3.7e-1734.97Show/hide
Query:  LENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRR-KNRLEDILDDRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHA
        ++NL+ +E+  WK R K++W K GD+NTK+FH+ AN RR KNR+++I DD  ++++         EQ     +PY   E+   LK M P+K+ GPNG  A
Subjt:  LENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRR-KNRLEDILDDRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHA

Query:  --------------------MLKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRKE---CIAERLEGANSVLQQNW
                             LKKVL  +IS++QSAF+L RL +DN++  ++ +H + +R+K     +A +L+ A +  +  W
Subjt:  --------------------MLKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRKE---CIAERLEGANSVLQQNW

TrEMBL top hitse value%identityAlignment
A0A2I4GX79 uncharacterized protein LOC1090116592.9e-1529.88Show/hide
Query:  NDLGNAHA--ASCLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSER-ELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFR
        ND+G      ++C  KL  WN+    G ++  +    +++Q L    + + +       R E++  L+ EE  W+ R K  WLK GD+N+K+FHT A+ R
Subjt:  NDLGNAHA--ASCLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSER-ELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFR

Query:  RK----NRLEDILDD------RVKIIMEGISHSIIEEQVR-------------------EIDKPYSSVEIEATLKIMNPMKALGPNGV--------HAML
        R+     RL+D   +      + +II+E   +       R                   ++ +PY+  E+   LK MNP KA GP+G+          +L
Subjt:  RK----NRLEDILDD------RVKIIMEGISHSIIEEQVR-------------------EIDKPYSSVEIEATLKIMNPMKALGPNGV--------HAML

Query:  KKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRKE
        KK+L ++IS +QSAFV  RL++DNV+  +E IH +  +  E
Subjt:  KKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRKE

A0A2N9EEA9 CCHC-type domain-containing protein1.9e-1428.87Show/hide
Query:  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD--
        C   L++W+K R  G + + I  K K +Q L NV      A +   + E+ +LL++EE +W+ R +  W++ GD+NT++FH   N RRK N +  +LD  
Subjt:  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD--

Query:  -----DRVKI------------------------IMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM-----------------LK
             D++K+                         + G+   + ++    + + +S  E+   L  M P KA GP+G+ A+                 LK
Subjt:  -----DRVKI------------------------IMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM-----------------LK

Query:  KVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRK
         VL  +IS +QSAFV  RL++DNV+  FE +H+++ ++K
Subjt:  KVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRK

A0A2N9ERX7 CCHC-type domain-containing protein1.4e-1428.87Show/hide
Query:  SCLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD-
        SC + L+SW+K R  GS+ + I  K K++QAL N         +   + EL +LL++EE +W  R +  W++ GDRN K+FH   N RRK N ++ +LD 
Subjt:  SCLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD-

Query:  ------------------------------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHA-----------------ML
                                      + +   + G+   +  +    +   +++ E++  L  M P KA GP+G+ A                  L
Subjt:  ------------------------------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHA-----------------ML

Query:  KKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRR
        K VL  +I+  QSAFV  RL++DNV+  FE +H+++ +R
Subjt:  KKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRR

A0A2N9FWV7 CCHC-type domain-containing protein2.2e-1528.05Show/hide
Query:  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRR------------
        C   L++W++ R  GS+   I +K +++Q   N++     + +   + EL  LL++EE +W+ R +  W+  GD+NTK+FH     RR            
Subjt:  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRR------------

Query:  ------KNRLEDIL--------------DDRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAMLKKVLGSIISSTQSAFVLS
              KN++ DI                D +   +EG+   +  +    +   ++  E+ A L+ M P KA GP+G+ A+  +    I+S +QSAFV  
Subjt:  ------KNRLEDIL--------------DDRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAMLKKVLGSIISSTQSAFVLS

Query:  RLVSDNVVARFECIHAINSRR
        RL++DNV+  FE +H+++ +R
Subjt:  RLVSDNVVARFECIHAINSRR

A0A2N9IDC0 Uncharacterized protein2.2e-1526.78Show/hide
Query:  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD--
        C   L++W++ +  GS  + I  K + +Q L++    +    +   + EL  LL++EE +W+ R +  W+  GD+NTK+FH   N RR+ N ++ + D  
Subjt:  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD--

Query:  -----------------------------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM-----------------LK
                                     D ++  +EG+   +  E   ++ + +++ E+   L+ M P KA GP+G+ A+                 LK
Subjt:  -----------------------------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM-----------------LK

Query:  KVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRK
        KVL  ++S +QSAFV  RL++DNV+  FE +H+++ +R+
Subjt:  KVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCTTCTAGAGGCCCCCAAAGCAGAGATCTAGTTGCTGAATCGAACAAGAGGCGAGGGTTTGAAAGTTCAAGAGCAAGGATTAACGATCTGGGGAATGCTCATGC
AGCTTCATGTCTTGAGAAGCTAATGAGTTGGAACAAAGCCAGACTTAAGGGTTCTATCAAAACTGTTATTTCAATAAAAGAGAAAGAGATTCAAGCCTTACTCAATGTGG
CTAATCAATTTCAAGAAGCTGTGGTCAGAAGATCAGAAAGGGAATTGGAAAACTTGTTGGATGAAGAGGAGAAGTATTGGAAGTTGAGGTTCAAGGAAGATTGGCTTAAG
TGGGGAGATCGCAATACAAAATGGTTCCACACTGGAGCCAATTTTAGGAGGAAAAACAGACTAGAAGACATTTTGGATGACAGAGTCAAGATTATTATGGAGGGCATCTC
TCACTCAATCATAGAGGAACAAGTCAGGGAGATCGATAAACCATACTCTAGTGTAGAGATAGAAGCAACGCTCAAAATCATGAATCCTATGAAGGCCTTGGGTCCTAACG
GGGTCCACGCGATGTTAAAGAAGGTCCTTGGCTCCATCATCTCCTCGACCCAATCAGCATTTGTCCTTAGTAGGCTCGTTTCAGACAATGTTGTAGCAAGGTTCGAGTGC
ATTCACGCGATTAATAGCAGGAGGAAAGAATGTATTGCTGAGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAAAACTGCCACGTCACAACTTGTTA
G
mRNA sequenceShow/hide mRNA sequence
ATGGTATCTTCTAGAGGCCCCCAAAGCAGAGATCTAGTTGCTGAATCGAACAAGAGGCGAGGGTTTGAAAGTTCAAGAGCAAGGATTAACGATCTGGGGAATGCTCATGC
AGCTTCATGTCTTGAGAAGCTAATGAGTTGGAACAAAGCCAGACTTAAGGGTTCTATCAAAACTGTTATTTCAATAAAAGAGAAAGAGATTCAAGCCTTACTCAATGTGG
CTAATCAATTTCAAGAAGCTGTGGTCAGAAGATCAGAAAGGGAATTGGAAAACTTGTTGGATGAAGAGGAGAAGTATTGGAAGTTGAGGTTCAAGGAAGATTGGCTTAAG
TGGGGAGATCGCAATACAAAATGGTTCCACACTGGAGCCAATTTTAGGAGGAAAAACAGACTAGAAGACATTTTGGATGACAGAGTCAAGATTATTATGGAGGGCATCTC
TCACTCAATCATAGAGGAACAAGTCAGGGAGATCGATAAACCATACTCTAGTGTAGAGATAGAAGCAACGCTCAAAATCATGAATCCTATGAAGGCCTTGGGTCCTAACG
GGGTCCACGCGATGTTAAAGAAGGTCCTTGGCTCCATCATCTCCTCGACCCAATCAGCATTTGTCCTTAGTAGGCTCGTTTCAGACAATGTTGTAGCAAGGTTCGAGTGC
ATTCACGCGATTAATAGCAGGAGGAAAGAATGTATTGCTGAGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAAAACTGCCACGTCACAACTTGTTA
G
Protein sequenceShow/hide protein sequence
MVSSRGPQSRDLVAESNKRRGFESSRARINDLGNAHAASCLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLK
WGDRNTKWFHTGANFRRKNRLEDILDDRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAMLKKVLGSIISSTQSAFVLSRLVSDNVVARFEC
IHAINSRRKECIAERLEGANSVLQQNWEQNCHVTTC