; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007948 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007948
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionsmall GTPase LIP1-like
Genome locationchr9:8856363..8862736
RNA-Seq ExpressionLag0007948
SyntenyLag0007948
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR025662 - Sigma-54 interaction domain, ATP-binding site 1
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035249.1 Small GTPase LIP1 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-5596.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDR+NKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

XP_022157745.1 small GTPase LIP1 isoform X2 [Momordica charantia]1.7e-5596.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDRENKELNG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSS SCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

XP_022947826.1 small GTPase LIP1-like [Cucurbita moschata]1.7e-5596.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDR+NKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

XP_023533303.1 small GTPase LIP1-like [Cucurbita pepo subsp. pepo]1.7e-5596.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDR+NKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

XP_038901123.1 small GTPase LIP1 [Benincasa hispida]7.8e-5696.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDRE+KELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNG+SISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

TrEMBL top hitse value%identityAlignment
A0A5D3CQH6 Putative GTP-binding protein5.5e-5595.58Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDRE+KELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSIS PSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGH+RYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

A0A6J1DTZ0 small GTPase LIP1 isoform X28.4e-5696.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDRENKELNG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSS SCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

A0A6J1DXF4 small GTPase LIP1 isoform X18.4e-5696.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDRENKELNG PLCGQVRVLVVGDSGVGKTSLVHLIVNGSS SCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

A0A6J1G7J8 small GTPase LIP1-like8.4e-5696.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDR+NKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

A0A6J1KZF8 small GTPase LIP1-like8.4e-5696.46Show/hide
Query:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
        MFWKDRDR+NKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISC SQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR
Subjt:  MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCR

Query:  SLFYSQINGKISV
        SLFYSQING I V
Subjt:  SLFYSQINGKISV

SwissProt top hitse value%identityAlignment
F4KFD8 Small GTPase-like protein LIP21.2e-4681.25Show/hide
Query:  FWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRS
        FW++R RENKE    PLCGQ+RVLVVGDSGVGK+SLVHLIV GSSI  PSQTIGCTVGVKH+TY +  SSSS IKGD+ERDFFVELWDVSGHERYKDCRS
Subjt:  FWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRS

Query:  LFYSQINGKISV
        LFYSQING I V
Subjt:  LFYSQINGKISV

Q32LJ6 Rab-like protein 31.2e-1140.21Show/hide
Query:  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGH----ERYKDCRSLFYSQINGKISV
        +V+VLV+GDSGVGK+SLVHL+     +  PS T+GC+V V+   Y              E+ +++ELWDV G        K  R++FY+ +NG I V
Subjt:  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGH----ERYKDCRSLFYSQINGKISV

Q5HYI8 Rab-like protein 31.2e-1140.21Show/hide
Query:  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGH----ERYKDCRSLFYSQINGKISV
        +V+VLV+GDSGVGK+SLVHL+     +  PS T+GC+V V+   Y              E+ +++ELWDV G        K  R++FY+ +NG I V
Subjt:  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGH----ERYKDCRSLFYSQINGKISV

Q6TNS7 Rab-like protein 37.2e-1241.24Show/hide
Query:  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGH----ERYKDCRSLFYSQINGKISV
        +V+VLV+GDSGVGK+SLVHL+     +  PS T+GC+V V+   Y              E+ F++ELWDV G        K  R++FY+ +NG I V
Subjt:  QVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGH----ERYKDCRSLFYSQINGKISV

Q9C5J9 Small GTPase LIP13.1e-4783.04Show/hide
Query:  FWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRS
        FW++R+RENKE    PLCGQVRVLVVGDSGVGKTSLVHLI  GSSI  P QTIGCTVGVKHITYG+  SSSSSI+GD+ERDFFVELWDVSGHERYKDCRS
Subjt:  FWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRS

Query:  LFYSQINGKISV
        LFYSQING I V
Subjt:  LFYSQINGKISV

Arabidopsis top hitse value%identityAlignment
AT1G43890.1 RAB GTPASE HOMOLOG B183.6e-0634.07Show/hide
Query:  RVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGKISV
        +VL++GDSGVGK+SL+ L    ++    S TIG    VK++T G             E+   + +WD +G ER++   S +Y    G I V
Subjt:  RVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGKISV

AT1G43890.2 RAB GTPASE HOMOLOG B183.6e-0634.07Show/hide
Query:  RVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGKISV
        +VL++GDSGVGK+SL+ L    ++    S TIG    VK++T G             E+   + +WD +G ER++   S +Y    G I V
Subjt:  RVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGKISV

AT1G43890.3 RAB GTPASE HOMOLOG B183.6e-0634.07Show/hide
Query:  RVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGKISV
        +VL++GDSGVGK+SL+ L    ++    S TIG    VK++T G             E+   + +WD +G ER++   S +Y    G I V
Subjt:  RVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGKISV

AT5G09910.1 Ras-related small GTP-binding family protein8.4e-4881.25Show/hide
Query:  FWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRS
        FW++R RENKE    PLCGQ+RVLVVGDSGVGK+SLVHLIV GSSI  PSQTIGCTVGVKH+TY +  SSSS IKGD+ERDFFVELWDVSGHERYKDCRS
Subjt:  FWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRS

Query:  LFYSQINGKISV
        LFYSQING I V
Subjt:  LFYSQINGKISV

AT5G64813.1 Ras-related small GTP-binding family protein2.2e-4883.04Show/hide
Query:  FWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRS
        FW++R+RENKE    PLCGQVRVLVVGDSGVGKTSLVHLI  GSSI  P QTIGCTVGVKHITYG+  SSSSSI+GD+ERDFFVELWDVSGHERYKDCRS
Subjt:  FWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRS

Query:  LFYSQINGKISV
        LFYSQING I V
Subjt:  LFYSQINGKISV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTGGAAGGACCGTGATAGGGAGAACAAAGAACTCAATGGCGGTCCTCTCTGTGGGCAGGTTCGAGTGCTTGTGGTTGGTGATTCAGGTGTGGGGAAAACTTCTCT
AGTTCATCTAATTGTAAACGGTTCTTCCATTTCTTGCCCTTCTCAAACTATTGGCTGTACAGTTGGAGTTAAGCATATCACTTATGGAAATGCTGGTAGCTCTTCAAGTA
GCATAAAAGGTGATGCCGAGAGAGATTTCTTTGTTGAACTTTGGGATGTGTCAGGGCATGAGCGCTACAAAGACTGTCGTTCTCTTTTCTATTCGCAGATCAATGGTAAG
ATCTCTGTACCTGTCAGTTTTTCGACTTCTCCGAATGTCTTATTCTTCGATTCATCATCTTTCAAGTGTCTTCTTAATAAAACCTTCCATGAGCATGATGTGGAATCCCA
AGCTTCAGAAACTAAACCATTTGAGAATGAAGCAATGTTAGGAAGTTTGACCATCAGAGGAGAAGAATCCACCCATGCATCGATCCAAATTTTGATTCCGTTGCCATTTC
CCAATTTGATTTCAAAAGTTGTGGAAGTTTCTCTCTCTCTACCTCAATACTATTTGTATCGATGGTTTCTCCTTGTGGCTATCAGGTATCCATGGGTCTTCGAGGGCATC
CCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTGGAAGGACCGTGATAGGGAGAACAAAGAACTCAATGGCGGTCCTCTCTGTGGGCAGGTTCGAGTGCTTGTGGTTGGTGATTCAGGTGTGGGGAAAACTTCTCT
AGTTCATCTAATTGTAAACGGTTCTTCCATTTCTTGCCCTTCTCAAACTATTGGCTGTACAGTTGGAGTTAAGCATATCACTTATGGAAATGCTGGTAGCTCTTCAAGTA
GCATAAAAGGTGATGCCGAGAGAGATTTCTTTGTTGAACTTTGGGATGTGTCAGGGCATGAGCGCTACAAAGACTGTCGTTCTCTTTTCTATTCGCAGATCAATGGTAAG
ATCTCTGTACCTGTCAGTTTTTCGACTTCTCCGAATGTCTTATTCTTCGATTCATCATCTTTCAAGTGTCTTCTTAATAAAACCTTCCATGAGCATGATGTGGAATCCCA
AGCTTCAGAAACTAAACCATTTGAGAATGAAGCAATGTTAGGAAGTTTGACCATCAGAGGAGAAGAATCCACCCATGCATCGATCCAAATTTTGATTCCGTTGCCATTTC
CCAATTTGATTTCAAAAGTTGTGGAAGTTTCTCTCTCTCTACCTCAATACTATTTGTATCGATGGTTTCTCCTTGTGGCTATCAGGTATCCATGGGTCTTCGAGGGCATC
CCATGA
Protein sequenceShow/hide protein sequence
MFWKDRDRENKELNGGPLCGQVRVLVVGDSGVGKTSLVHLIVNGSSISCPSQTIGCTVGVKHITYGNAGSSSSSIKGDAERDFFVELWDVSGHERYKDCRSLFYSQINGK
ISVPVSFSTSPNVLFFDSSSFKCLLNKTFHEHDVESQASETKPFENEAMLGSLTIRGEESTHASIQILIPLPFPNLISKVVEVSLSLPQYYLYRWFLLVAIRYPWVFEGI
P