; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0007951 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007951
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr9:8879509..8881429
RNA-Seq ExpressionLag0007951
SyntenyLag0007951
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3480024.1 reverse transcriptase [Gossypium australe]1.7e-1056.45Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE
        G  + DN +L YE +H LK    GK  +  +KLDMSKAYDRVEW +++ IMVRMGFA+ WVE
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.3e-1054.84Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE
        G  + DN ++ +ECI+A+K+   GK    ++KLDMSKAYDRVEW YL  IMV+MGFA  WV+
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE

XP_023913142.1 uncharacterized protein LOC112024740 [Quercus suber]2.9e-1054.1Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV
        G  + DN +L YE +HA+    KGKTR  +LKLD+SKAYDRVEW +L+ +M+R+GF  EW+
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV

XP_030485307.1 uncharacterized protein LOC115701983 [Cannabis sativa]7.7e-1150.82Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV
        G  + DN ++ YEC+H LK+   G+  + ++KLDMSKAYDRVEW ++E +M++MGF +EWV
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV

XP_041026997.1 uncharacterized protein LOC121267211 [Juglans microcarpa x Juglans regia]3.8e-1055.74Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV
        G  + DN V  YE +H++K+  KGK    +LKLD+SKAYDRVEW YLE IMV+MGF   W+
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV

TrEMBL top hitse value%identityAlignment
A0A3Q7FJE6 Reverse transcriptase domain-containing protein3.7e-1154.1Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV
        G Y+ DN ++ +E +H LK   +GK  +A+LK DMSKAYDRVEW +L  +M++MGF LEWV
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV

A0A5B6WFD8 Reverse transcriptase8.3e-1156.45Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE
        G  + DN +L YE +H LK    GK  +  +KLDMSKAYDRVEW +++ IMVRMGFA+ WVE
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE

A0A6J1DUG8 uncharacterized protein LOC1110241356.4e-1154.84Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE
        G  + DN ++ +ECI+A+K+   GK    ++KLDMSKAYDRVEW YL  IMV+MGFA  WV+
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE

A0A803PT14 Uncharacterized protein1.7e-1153.23Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE
        G +++DN +L +E +H LK+  +G   +A+LKLDMSKA+DRVEW +LE +M++MGFA +WVE
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE

M8CCV4 Pleiotropic drug resistance protein 44.9e-1147.14Show/hide
Query:  LKEEKKMLGSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE
        + EE+ + G  + DN +  YEC+H +K N   + R+ ++KLDM KAYD+VEW+YL  IM +MGFA  WV+
Subjt:  LKEEKKMLGSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.9e-0740.98Show/hide
Query:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV
        G    DN V   E +H+++   KG   W  LKLD+ KAYDR+ W YLE  ++  GF   W+
Subjt:  GSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACATTATCTTCTGCCATTGAAGTTATTGAAATTGACGATTCAATTCCTATTGTGTCAATGATTCAGAGTTTGAGTGAATTTCCTCTCAAAGAAGAAAAGAAAAT
GTTAGGGAGTTATGTAGTGGATAATGACGTATTGGAGTACGAGTGTATCCATGCATTGAAGTCCAATGGGAAGGGGAAAACAAGATGGGCCTCTCTCAAACTTGATATGA
GTAAGGCATATGACCGAGTGGAGTGGATGTATTTGGAATGGATTATGGTGAGAATGGGTTTTGCCCTGGAGTGGGTAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACATTATCTTCTGCCATTGAAGTTATTGAAATTGACGATTCAATTCCTATTGTGTCAATGATTCAGAGTTTGAGTGAATTTCCTCTCAAAGAAGAAAAGAAAAT
GTTAGGGAGTTATGTAGTGGATAATGACGTATTGGAGTACGAGTGTATCCATGCATTGAAGTCCAATGGGAAGGGGAAAACAAGATGGGCCTCTCTCAAACTTGATATGA
GTAAGGCATATGACCGAGTGGAGTGGATGTATTTGGAATGGATTATGGTGAGAATGGGTTTTGCCCTGGAGTGGGTAGAGTAG
Protein sequenceShow/hide protein sequence
MPTLSSAIEVIEIDDSIPIVSMIQSLSEFPLKEEKKMLGSYVVDNDVLEYECIHALKSNGKGKTRWASLKLDMSKAYDRVEWMYLEWIMVRMGFALEWVE