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Lag0007959 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007959
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:8983886..8984257
RNA-Seq ExpressionLag0007959
SyntenyLag0007959
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8782072.1 hypothetical protein D1007_44590 [Hordeum vulgare]4.6e-1339.78Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREF
        +G F++V++ E G    ++LR+KV++ + KPL  GT I  G    + W    YE L +FCY CGIIG+  K C   L  K ++ QFG W+R +
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREF

KAE8817564.1 hypothetical protein D1007_04663 [Hordeum vulgare]3.9e-1236.75Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREFPAPRGGN
        +G+ +EV++ +  R   + LRVKVR+ + KPL  G  +Q G+  +  W    YE L  FCY+CGIIG+  KEC  K    E   Q+G W+R +       
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREFPAPRGGN

Query:  KGKKGLDAEKQRGKETR
          KK + +E +R  E R
Subjt:  KGKKGLDAEKQRGKETR

KAF0920597.1 hypothetical protein E2562_035741 [Oryza meyeriana var. granulata]3.9e-1245.05Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMR
        +G+ LEVD +E G    + LR+K  + VRKPL  G  ++ G+     W    YE L +FCYS G++G+  KEC  K+  KED  QFGDWMR
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMR

TXG66222.1 hypothetical protein EZV62_007497 [Acer yangbiense]3.9e-1239.45Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKL----EEKEDDLQFGDWMREFPAP
        +G+ +EVD  + G      LRV+V +++ KPLR    I +      + + + YERL DFC+ CG+IG+S+K+CPEK     +  ++D  FG WMR FP  
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKL----EEKEDDLQFGDWMREFPAP

Query:  RG-GNKGKK
        R  G+ G+K
Subjt:  RG-GNKGKK

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.0e-1439.45Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDD----LQFGDWMREFPAP
        +G F++VD NE+G     +LR++V + + KPLR G  I I       WI + YERL DFCY CG+IG+S  +C  +    +DD     ++G W+R   + 
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDD----LQFGDWMREFPAP

Query:  RGGNKGKKG
         G  KG+KG
Subjt:  RGGNKGKKG

TrEMBL top hitse value%identityAlignment
A0A0P0Y9A8 Os12g0407600 protein4.2e-1236.7Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREFPAPR---
        +G+F++++  E G      L +K+R+ +RKPL  G  + +G+  +  W  + YE L DFCY+CGIIG++ K C  KL+E E+  QF   +R  P  +   
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREFPAPR---

Query:  -GGNKGKKG
         G N G +G
Subjt:  -GGNKGKKG

A0A5C7IBW4 CCHC-type domain-containing protein1.9e-1239.45Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKL----EEKEDDLQFGDWMREFPAP
        +G+ +EVD  + G      LRV+V +++ KPLR    I +      + + + YERL DFC+ CG+IG+S+K+CPEK     +  ++D  FG WMR FP  
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKL----EEKEDDLQFGDWMREFPAP

Query:  RG-GNKGKK
        R  G+ G+K
Subjt:  RG-GNKGKK

A0A6G1BXB4 zf-CCHC_4 domain-containing protein2.4e-1237.29Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREFPAPRG--
        +G+F+EVD+++    +   LRVKVR+ + KPL  G  + +G++ E  W  + YE L DFCY CGIIG++ K C  ++  K +  Q+G  +R  P  R   
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREFPAPRG--

Query:  ---GNKGKKGLDAEKQRG
           G K   G  A   RG
Subjt:  ---GNKGKKGLDAEKQRG

A0A6G1E7A7 Uncharacterized protein1.9e-1245.05Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMR
        +G+ LEVD +E G    + LR+K  + VRKPL  G  ++ G+     W    YE L +FCYS G++G+  KEC  K+  KED  QFGDWMR
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMR

A0A6J1DU55 uncharacterized protein LOC1110231353.4e-1439.45Show/hide
Query:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDD----LQFGDWMREFPAP
        +G F++VD NE+G     +LR++V + + KPLR G  I I       WI + YERL DFCY CG+IG+S  +C  +    +DD     ++G W+R   + 
Subjt:  MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDD----LQFGDWMREFPAP

Query:  RGGNKGKKG
         G  KG+KG
Subjt:  RGGNKGKKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAATTTTTAGAAGTGGATATAAACGAAAGAGGGAGATGTAATGAAGACACTCTGAGAGTAAAAGTTAGAATGAAGGTTCGGAAACCTTTGCGGGGAGGGACAAA
CATTCAAATCGGGAAGTCGAATGAAATGACATGGATCAGAATGACATACGAAAGACTCTCGGATTTCTGTTATAGTTGCGGAATAATTGGTTACTCAATGAAGGAATGCC
CTGAAAAGTTGGAAGAGAAAGAGGACGACTTGCAATTCGGAGATTGGATGAGGGAGTTCCCTGCTCCAAGAGGAGGAAATAAGGGAAAAAAAGGATTGGATGCGGAAAAG
CAGAGGGGAAAGGAAACTAGAATCTTGGGTAACAAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACAATTTTTAGAAGTGGATATAAACGAAAGAGGGAGATGTAATGAAGACACTCTGAGAGTAAAAGTTAGAATGAAGGTTCGGAAACCTTTGCGGGGAGGGACAAA
CATTCAAATCGGGAAGTCGAATGAAATGACATGGATCAGAATGACATACGAAAGACTCTCGGATTTCTGTTATAGTTGCGGAATAATTGGTTACTCAATGAAGGAATGCC
CTGAAAAGTTGGAAGAGAAAGAGGACGACTTGCAATTCGGAGATTGGATGAGGGAGTTCCCTGCTCCAAGAGGAGGAAATAAGGGAAAAAAAGGATTGGATGCGGAAAAG
CAGAGGGGAAAGGAAACTAGAATCTTGGGTAACAAAAAGTAA
Protein sequenceShow/hide protein sequence
MGQFLEVDINERGRCNEDTLRVKVRMKVRKPLRGGTNIQIGKSNEMTWIRMTYERLSDFCYSCGIIGYSMKECPEKLEEKEDDLQFGDWMREFPAPRGGNKGKKGLDAEK
QRGKETRILGNKK