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Lag0007977 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007977
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr9:9224367..9230529
RNA-Seq ExpressionLag0007977
SyntenyLag0007977
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591418.1 Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma subsp. sororia]5.9e-0457.41Show/hide
Query:  SMAFAVKIDYYYNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNN
        +M    +I   +NA+N A A HHKRKSIVVA DD   HNKLNN P K+I  SNN
Subjt:  SMAFAVKIDYYYNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNN
KAG7024298.1 Transcription factor bHLH84 [Cucurbita argyrosperma subsp. argyrosperma]9.1e-0559.26Show/hide
Query:  SMAFAVKIDYYYNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNN
        +M    +I   +NA+N A A HHKRKSIVVA DDD  HNKLNN P K+I  SNN
Subjt:  SMAFAVKIDYYYNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCCACTTCTCTGTAAGATCAGCTACACTGAAGGCATTGGAGATGTAGGTGTCAGGAGCACAGCAAGATATAAAGTGCGGCAATTTGTAGAACATGCCAACAACAA
AGGTTCAGTTGTCTCCCTTCGGAATTTTAGGCAATCTGAGAATGAAGTTGATGGGGGACTCAGGAGTAGATATTTTGGGAGAGTCGATGCCCTCTTTAACTGCTTGGGTA
TAATACAATTTCAGTGTTATTTTCTTGCTTCTATTCTCAAGGATTGGGTTCCTACTTCCTATCCAGAGTCCATGGTTAGATCTTCAATATATATTCTGGAACAGTCGCCA
TTGTTGCTGTTCAGAGAGAGATTAGTGTGGATTAACGTCGAACAAGAATTCTTCCGTGTTTCAGAGGATTCTGTTGGTGCCGCACAGCAACTGCGCGGAGAGAGTGCAGA
TGTTTATAGACAGAGATGGTTTCTTTCTTCCTCATTCAAACGCTTTTCTTCCACCGCCGCCCCCGATGTTCGTCCGTCGCCTCTCCCAGTCTCCTCTCGTGCTCGTGTTT
ACCGCCACCGCCGGTGCTTTTCGTGCTTGCTGCCGAGTTTAGGTTGCCGTCGGATTATCATATGTCGATGTCTGGTGGCGCGATTGAAGAGAAGAAGATGGAGTCTGTTT
TCTCGGCTTGTAATGACATTTTGCTGCAAGAGATCAATGGCTTTTGCAGTGAAGATAGATTATTATTATAATGCTAGCAATCCTGCAAATGCATTGCACCACAAAAGGAA
GTCCATTGTTGTCGCTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGACCCCAATAAGAGAATTTGTGCTTCAAACAATGCAACAATGGAATATGGAGAGGCTG
ATGAAGTCATTTTCTCTGTTATTGGTCCTCGAAGCATTCACCTTTCTGGTGTGCCCCTTCTGCCCGGTCAGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCCACTTCTCTGTAAGATCAGCTACACTGAAGGCATTGGAGATGTAGGTGTCAGGAGCACAGCAAGATATAAAGTGCGGCAATTTGTAGAACATGCCAACAACAA
AGGTTCAGTTGTCTCCCTTCGGAATTTTAGGCAATCTGAGAATGAAGTTGATGGGGGACTCAGGAGTAGATATTTTGGGAGAGTCGATGCCCTCTTTAACTGCTTGGGTA
TAATACAATTTCAGTGTTATTTTCTTGCTTCTATTCTCAAGGATTGGGTTCCTACTTCCTATCCAGAGTCCATGGTTAGATCTTCAATATATATTCTGGAACAGTCGCCA
TTGTTGCTGTTCAGAGAGAGATTAGTGTGGATTAACGTCGAACAAGAATTCTTCCGTGTTTCAGAGGATTCTGTTGGTGCCGCACAGCAACTGCGCGGAGAGAGTGCAGA
TGTTTATAGACAGAGATGGTTTCTTTCTTCCTCATTCAAACGCTTTTCTTCCACCGCCGCCCCCGATGTTCGTCCGTCGCCTCTCCCAGTCTCCTCTCGTGCTCGTGTTT
ACCGCCACCGCCGGTGCTTTTCGTGCTTGCTGCCGAGTTTAGGTTGCCGTCGGATTATCATATGTCGATGTCTGGTGGCGCGATTGAAGAGAAGAAGATGGAGTCTGTTT
TCTCGGCTTGTAATGACATTTTGCTGCAAGAGATCAATGGCTTTTGCAGTGAAGATAGATTATTATTATAATGCTAGCAATCCTGCAAATGCATTGCACCACAAAAGGAA
GTCCATTGTTGTCGCTGGTGATGATGATCTTGATCACAACAAGCTCAACAACGACCCCAATAAGAGAATTTGTGCTTCAAACAATGCAACAATGGAATATGGAGAGGCTG
ATGAAGTCATTTTCTCTGTTATTGGTCCTCGAAGCATTCACCTTTCTGGTGTGCCCCTTCTGCCCGGTCAGTCTTGA
Protein sequenceShow/hide protein sequence
MWPLLCKISYTEGIGDVGVRSTARYKVRQFVEHANNKGSVVSLRNFRQSENEVDGGLRSRYFGRVDALFNCLGIIQFQCYFLASILKDWVPTSYPESMVRSSIYILEQSP
LLLFRERLVWINVEQEFFRVSEDSVGAAQQLRGESADVYRQRWFLSSSFKRFSSTAAPDVRPSPLPVSSRARVYRHRRCFSCLLPSLGCRRIIICRCLVARLKRRRWSLF
SRLVMTFCCKRSMAFAVKIDYYYNASNPANALHHKRKSIVVAGDDDLDHNKLNNDPNKRICASNNATMEYGEADEVIFSVIGPRSIHLSGVPLLPGQS