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Lag0007979 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007979
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr9:9273851..9275436
RNA-Seq ExpressionLag0007979
SyntenyLag0007979
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45805.1 hypothetical protein Csa_005190 [Cucumis sativus]3.5e-3549.7Show/hide
Query:  LGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQRGNMTLEEYMKQFKALNDKLAAMKRPLDDVTKVFSL
        +GIE HL      D     K+  S  +P   +W+  DGLL SWLL II ++V  M+EG ++  Q+G  TL+E++K+ K L DKLAAMK+P DDV KVF L
Subjt:  LGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQRGNMTLEEYMKQFKALNDKLAAMKRPLDDVTKVFSL

Query:  ARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRG
        ARGL SRY+ F+T MLS+   P+FNQ V+ +K+H++M   E EEE  V +N   AF +Q+GRNRGRG
Subjt:  ARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRG

RVW43526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.0e-2937.19Show/hide
Query:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT
        + SLG+  HL  N        G + + T +     W +NDGLLTSWLLG++++EV+ +++G ++A+                            ++G  +
Subjt:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT

Query:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG
        L+EY+++FK + D LAA+++P+ D+ KVF LA+GL ++Y DF+  MLS+  YP++NQFVL L+ HEQM   E EE    ++N   A+ +QRGR R RGG
Subjt:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG

RVW93768.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.5e-3037.69Show/hide
Query:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT
        + SLG+  HL  N        G + + T +     W +NDGLLTSWLLG+++KEV+ +++G ++A+                            ++G  +
Subjt:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT

Query:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG
        L+EY+++FK + D LAA+++P+ D+ KVF LA+GL ++Y DF+  MLS+  YP++NQFVL L+ HEQM  +E EE    ++N   A+ +QRGR R RGG
Subjt:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG

RVX14187.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]7.6e-3036.68Show/hide
Query:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT
        + SLG+  HL  N        G + + T +     W +NDGLLTSWLLG++++EV+ +++G+++A+                            ++G  +
Subjt:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT

Query:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG
        L+EY+++FK + D LA +++P+ D+ KVF LA+GL ++Y DF+  MLS+  YP++NQFVL L+ HEQM   E EE    ++N   A+ +QRGR R RGG
Subjt:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG

XP_022154021.1 uncharacterized protein LOC111021379 [Momordica charantia]9.6e-4147.47Show/hide
Query:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQ----------------------------RGNMT
        I +LG+E HL    P     KGK+GES    Q   W+NNDGLLTSWLLGII+++VL ++EG ++A +                            +G+++
Subjt:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQ----------------------------RGNMT

Query:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRG
        ++EY+++FK L D+L AMK+PLDD+TKVF LARGL  +YKDF+T MLS+  YP++NQFVL LK+H+Q    + EEE S  +NLN AF S RGR+RGRG
Subjt:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRG

TrEMBL top hitse value%identityAlignment
A0A0A0K7S3 Uncharacterized protein1.7e-3549.7Show/hide
Query:  LGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQRGNMTLEEYMKQFKALNDKLAAMKRPLDDVTKVFSL
        +GIE HL      D     K+  S  +P   +W+  DGLL SWLL II ++V  M+EG ++  Q+G  TL+E++K+ K L DKLAAMK+P DDV KVF L
Subjt:  LGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQRGNMTLEEYMKQFKALNDKLAAMKRPLDDVTKVFSL

Query:  ARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRG
        ARGL SRY+ F+T MLS+   P+FNQ V+ +K+H++M   E EEE  V +N   AF +Q+GRNRGRG
Subjt:  ARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRG

A0A438E6Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-944.8e-3037.19Show/hide
Query:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT
        + SLG+  HL  N        G + + T +     W +NDGLLTSWLLG++++EV+ +++G ++A+                            ++G  +
Subjt:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT

Query:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG
        L+EY+++FK + D LAA+++P+ D+ KVF LA+GL ++Y DF+  MLS+  YP++NQFVL L+ HEQM   E EE    ++N   A+ +QRGR R RGG
Subjt:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG

A0A438IAM2 Retrovirus-related Pol polyprotein from transposon RE17.4e-3137.69Show/hide
Query:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT
        + SLG+  HL  N        G + + T +     W +NDGLLTSWLLG+++KEV+ +++G ++A+                            ++G  +
Subjt:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT

Query:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG
        L+EY+++FK + D LAA+++P+ D+ KVF LA+GL ++Y DF+  MLS+  YP++NQFVL L+ HEQM  +E EE    ++N   A+ +QRGR R RGG
Subjt:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG

A0A438JZ09 Retrovirus-related Pol polyprotein from transposon RE13.7e-3036.68Show/hide
Query:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT
        + SLG+  HL  N        G + + T +     W +NDGLLTSWLLG++++EV+ +++G+++A+                            ++G  +
Subjt:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAH----------------------------QRGNMT

Query:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG
        L+EY+++FK + D LA +++P+ D+ KVF LA+GL ++Y DF+  MLS+  YP++NQFVL L+ HEQM   E EE    ++N   A+ +QRGR R RGG
Subjt:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG

A0A6J1DMG5 uncharacterized protein LOC1110213794.7e-4147.47Show/hide
Query:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQ----------------------------RGNMT
        I +LG+E HL    P     KGK+GES    Q   W+NNDGLLTSWLLGII+++VL ++EG ++A +                            +G+++
Subjt:  ILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQ----------------------------RGNMT

Query:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRG
        ++EY+++FK L D+L AMK+PLDD+TKVF LARGL  +YKDF+T MLS+  YP++NQFVL LK+H+Q    + EEE S  +NLN AF S RGR+RGRG
Subjt:  LEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARGLDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGCACGATACTCAGCCTTGGAATTGAACAACACCTAGATAGCAACACTCCTCCTGATGCAAATATCAAAGGCAAGGATGGAGAATCAACACAAAATCCTCAACC
TAGCATTTGGCTCAATAATGATGGTCTCTTAACCTCTTGGTTATTAGGAATCATTTCTAAGGAAGTTCTAGCAATGGTGGAAGGATTAGATAGTGCCCATCAAAGGGGAA
ACATGACCTTGGAGGAGTATATGAAGCAATTCAAAGCCCTTAATGACAAGCTAGCAGCTATGAAAAGGCCATTGGATGATGTAACAAAGGTATTTTCTCTCGCTCGGGGA
TTGGATAGTAGATATAAGGACTTTAAAACAATCATGTTGTCAAGAATTCTATATCCTACTTTCAATCAATTTGTTCTTACTCTTAAATCACATGAGCAAATGAACTTCCT
TGAAGCTGAGGAAGAAATGTCAGTAACTCTAAATCTCAATCACGCTTTTCTAAGCCAAAGAGGAAGAAATCGAGGTAGAGGTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGGCACGATACTCAGCCTTGGAATTGAACAACACCTAGATAGCAACACTCCTCCTGATGCAAATATCAAAGGCAAGGATGGAGAATCAACACAAAATCCTCAACC
TAGCATTTGGCTCAATAATGATGGTCTCTTAACCTCTTGGTTATTAGGAATCATTTCTAAGGAAGTTCTAGCAATGGTGGAAGGATTAGATAGTGCCCATCAAAGGGGAA
ACATGACCTTGGAGGAGTATATGAAGCAATTCAAAGCCCTTAATGACAAGCTAGCAGCTATGAAAAGGCCATTGGATGATGTAACAAAGGTATTTTCTCTCGCTCGGGGA
TTGGATAGTAGATATAAGGACTTTAAAACAATCATGTTGTCAAGAATTCTATATCCTACTTTCAATCAATTTGTTCTTACTCTTAAATCACATGAGCAAATGAACTTCCT
TGAAGCTGAGGAAGAAATGTCAGTAACTCTAAATCTCAATCACGCTTTTCTAAGCCAAAGAGGAAGAAATCGAGGTAGAGGTGGATAG
Protein sequenceShow/hide protein sequence
MIGTILSLGIEQHLDSNTPPDANIKGKDGESTQNPQPSIWLNNDGLLTSWLLGIISKEVLAMVEGLDSAHQRGNMTLEEYMKQFKALNDKLAAMKRPLDDVTKVFSLARG
LDSRYKDFKTIMLSRILYPTFNQFVLTLKSHEQMNFLEAEEEMSVTLNLNHAFLSQRGRNRGRGG