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Lag0007990 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0007990
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:9561608..9562216
RNA-Seq ExpressionLag0007990
SyntenyLag0007990
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.2e-2148.74Show/hide
Query:  WFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVS
        WF++LKR+SI+ FK+LA+AF+ QF G   + +P   LLTIKQ+ +ESL+DY+ RFN E LQVEG ++   L+   + ++D++L  S GKR   T+ E  S
Subjt:  WFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVS

Query:  RAQKYMSVEELLKSKKSER
        RAQ YMSV EL+ SK+  +
Subjt:  RAQKYMSVEELLKSKKSER

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.5e-2440.11Show/hide
Query:  EEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLT
        EE+MK +VP KFK+PT +                                        A+ WF +LKR SI+ FK LA+AF+ QF+G R + +P   LLT
Subjt:  EEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLT

Query:  IKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKK
        IKQ+ +ESL DY+ RFN+E LQVEG +   +L+A  +++ D+ L  S GK+ P T+ E +SRAQKYMS  E   SK+
Subjt:  IKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]2.1e-2651.54Show/hide
Query:  AKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVE
        A++WF +LKR SI+ FK+LA+AF+ QF+G R + KP   LLTIKQ+ +ESL++Y+ RFN+E LQVEG ++  AL+A  + ++D+RL  S GKR P T++E
Subjt:  AKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVE

Query:  FVSRAQKYMSVEELLK-SKKSEREHKRHSS
         +SRAQKYMS  EL+  S+  ERE   +S+
Subjt:  FVSRAQKYMSVEELLK-SKKSEREHKRHSS

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.9e-2841.12Show/hide
Query:  MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMG
        +E+L+DQ D P TEE+M+ +VP KFK+PT +                                        A+ WF +LKR SI+ FK LA+AF+ QF+G
Subjt:  MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMG

Query:  AREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKKSEREHKR
         R + +P   LLTIKQ+ +ESLRDY+ RFN+E LQVEG ++  +L+A  + + D+ L  S GKR P T+ E +SRAQ+YMS  E   SK+ E + KR
Subjt:  AREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKKSEREHKR

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.4e-2537.86Show/hide
Query:  MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMG
        +E+L+ Q D P TEE+M+ +VP KFK+PT +                                        A+ WF +LKR SI+ FK LA+AF+ QF+G
Subjt:  MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMG

Query:  AREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKK----SEREHK
         R + +P   LLTIKQ+ +ESL DY+ RFN+E LQ+EG ++  +L+A  + + D+ L  S  KR P T+ E +SRAQ+YMS  E   SK+       + K
Subjt:  AREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKK----SEREHK

Query:  RHSSVD
        R  S D
Subjt:  RHSSVD

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166195.9e-2248.74Show/hide
Query:  WFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVS
        WF++LKR+SI+ FK+LA+AF+ QF G   + +P   LLTIKQ+ +ESL+DY+ RFN E LQVEG ++   L+   + ++D++L  S GKR   T+ E  S
Subjt:  WFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVS

Query:  RAQKYMSVEELLKSKKSER
        RAQ YMSV EL+ SK+  +
Subjt:  RAQKYMSVEELLKSKKSER

A0A6J1D7D2 uncharacterized protein LOC1110183077.4e-2540.11Show/hide
Query:  EEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLT
        EE+MK +VP KFK+PT +                                        A+ WF +LKR SI+ FK LA+AF+ QF+G R + +P   LLT
Subjt:  EEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLT

Query:  IKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKK
        IKQ+ +ESL DY+ RFN+E LQVEG +   +L+A  +++ D+ L  S GK+ P T+ E +SRAQKYMS  E   SK+
Subjt:  IKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKK

A0A6J1DWY0 uncharacterized protein LOC1110252931.9e-2841.12Show/hide
Query:  MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMG
        +E+L+DQ D P TEE+M+ +VP KFK+PT +                                        A+ WF +LKR SI+ FK LA+AF+ QF+G
Subjt:  MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMG

Query:  AREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKKSEREHKR
         R + +P   LLTIKQ+ +ESLRDY+ RFN+E LQVEG ++  +L+A  + + D+ L  S GKR P T+ E +SRAQ+YMS  E   SK+ E + KR
Subjt:  AREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKKSEREHKR

A0A6J1DZ49 uncharacterized protein LOC1110248511.0e-2651.54Show/hide
Query:  AKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVE
        A++WF +LKR SI+ FK+LA+AF+ QF+G R + KP   LLTIKQ+ +ESL++Y+ RFN+E LQVEG ++  AL+A  + ++D+RL  S GKR P T++E
Subjt:  AKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVE

Query:  FVSRAQKYMSVEELLK-SKKSEREHKRHSS
         +SRAQKYMS  EL+  S+  ERE   +S+
Subjt:  FVSRAQKYMSVEELLK-SKKSEREHKRHSS

A0A6J1E1E7 uncharacterized protein LOC1110255486.7e-2637.86Show/hide
Query:  MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMG
        +E+L+ Q D P TEE+M+ +VP KFK+PT +                                        A+ WF +LKR SI+ FK LA+AF+ QF+G
Subjt:  MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFR---------------------------------------IAKHWFERLKRRSITYFKDLAQAFLAQFMG

Query:  AREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKK----SEREHK
         R + +P   LLTIKQ+ +ESL DY+ RFN+E LQ+EG ++  +L+A  + + D+ L  S  KR P T+ E +SRAQ+YMS  E   SK+       + K
Subjt:  AREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAITAELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKK----SEREHK

Query:  RHSSVD
        R  S D
Subjt:  RHSSVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAACTAATTGACCAAGTCGACCCACCGCTCACAGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAGGATAGCCAAGCATTGGTT
TGAAAGGTTGAAAAGGAGATCCATCACCTATTTCAAGGATTTAGCCCAAGCGTTCCTTGCACAGTTCATGGGAGCCAGAGAACAACGCAAGCCTCACATCAACCTCTTGA
CAATCAAACAGCAGCCAAGTGAGAGCTTGCGCGATTATATAACGCGTTTCAACGATGAAGCGCTACAGGTTGAGGGATACAGTGAGGGAGCAGCCCTGGTAGCTATCACA
GCTGAATTGGAGGATGACAGATTGTTCAATTCAATAGGTAAGAGGCAACCACGAACCTATGTCGAGTTTGTTTCCAGGGCACAGAAGTATATGAGCGTAGAGGAACTACT
GAAGTCAAAGAAGTCAGAACGAGAACACAAGAGACATTCTTCAGTCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAACTAATTGACCAAGTCGACCCACCGCTCACAGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTCAGGATAGCCAAGCATTGGTT
TGAAAGGTTGAAAAGGAGATCCATCACCTATTTCAAGGATTTAGCCCAAGCGTTCCTTGCACAGTTCATGGGAGCCAGAGAACAACGCAAGCCTCACATCAACCTCTTGA
CAATCAAACAGCAGCCAAGTGAGAGCTTGCGCGATTATATAACGCGTTTCAACGATGAAGCGCTACAGGTTGAGGGATACAGTGAGGGAGCAGCCCTGGTAGCTATCACA
GCTGAATTGGAGGATGACAGATTGTTCAATTCAATAGGTAAGAGGCAACCACGAACCTATGTCGAGTTTGTTTCCAGGGCACAGAAGTATATGAGCGTAGAGGAACTACT
GAAGTCAAAGAAGTCAGAACGAGAACACAAGAGACATTCTTCAGTCGATTAG
Protein sequenceShow/hide protein sequence
MEKLIDQVDPPLTEEVMKAEVPQKFKVPTFRIAKHWFERLKRRSITYFKDLAQAFLAQFMGAREQRKPHINLLTIKQQPSESLRDYITRFNDEALQVEGYSEGAALVAIT
AELEDDRLFNSIGKRQPRTYVEFVSRAQKYMSVEELLKSKKSEREHKRHSSVD