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Lag0008051 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008051
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:10836364..10836882
RNA-Seq ExpressionLag0008051
SyntenyLag0008051
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB38291.1 hypothetical protein L484_013924 [Morus notabilis]2.9e-3448.45Show/hide
Query:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY
        R++E+P+F   +GE+ DGW  R ERYF +N++TER+K++ AV+SLEGEAL+W Q+E+  SPI SW   + +LLERFRP  +G    + L L+QETTVRDY
Subjt:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY

Query:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPVIKSRLPSKGTMTDSFNDGQC
        RR+FE  AA L ++ E VLES F  GLK EI++E+R  +P    R+       +  N   C
Subjt:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPVIKSRLPSKGTMTDSFNDGQC

XP_010270441.1 PREDICTED: uncharacterized protein LOC104606771 [Nelumbo nucifera]7.5e-3051.06Show/hide
Query:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY
        RKLE+PIF    GE+ DGWL R ERYF +N L   + + AAV+ LEG+AL W+ +E+   P  SW EF++LLLERFR + +G+   +LL L Q TTV++Y
Subjt:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY

Query:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPV
        RR FE  +A L+D+ E VLE+ F  GL  +IQ+ELR+  PV
Subjt:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPV

XP_022897442.1 uncharacterized protein LOC111411108 [Olea europaea var. sylvestris]3.6e-3246.84Show/hide
Query:  LRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRD
        +R+LE+P+F   EG D DGW+ RVERYF VNRL+E +K+EAA +  +GEAL+W Q+EE   P+ +W + +  LL RFRPS +G   A+ L LQQ TTVR+
Subjt:  LRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRD

Query:  YRRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPVIKSRLPSKGTMTDSFN
        YRRRFE  A+ L  + E V+E  F  GL+ EI++E++  RP+   ++     M +  N
Subjt:  YRRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPVIKSRLPSKGTMTDSFN

XP_024017591.1 uncharacterized protein LOC112090471 [Morus notabilis]4.0e-3149.29Show/hide
Query:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY
        R++E+P+F   +GE+ DGW+ R ERYF +NRLT+R+K++ AV+SLEGEAL+W Q+E+    +  WTE ++ +LERF  + +G    + L L QETTVR+Y
Subjt:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY

Query:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRP
        RR+FE  AA L ++ E VLES F  GLK E+++E+R  +P
Subjt:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRP

XP_038904464.1 uncharacterized protein LOC120090832 [Benincasa hispida]1.6e-4059.86Show/hide
Query:  MHLRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTV
        M LRKLE+PIFK E GED  GW HRVERYFVVNRL+E+DK+EAA+L LEGEAL WHQ+EE  +P+ +W +F+  LL RF P  + DR A+ L L+Q+ +V
Subjt:  MHLRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTV

Query:  RDYRRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFR
        R YRRRFEQ   +LKD+ + +LESKF  GLK +IQ E+R F+
Subjt:  RDYRRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFR

TrEMBL top hitse value%identityAlignment
A0A1S8ADV7 Aminoacyl-tRNA ligase1.2e-2848.94Show/hide
Query:  LRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRD
        +RKL++PIF   EGED+ GW++R ERYF +N L+ER+K+ AA L LEG+AL+W Q+ E   P+ SW EF+  LLERF+ + +G  H +   L QE TV +
Subjt:  LRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRD

Query:  YRRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRP
        YR +FE  +  L  + E VLE  F  GLK EI++ LR  RP
Subjt:  YRRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRP

A0A1U8ARD0 uncharacterized protein LOC1046067713.6e-3051.06Show/hide
Query:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY
        RKLE+PIF    GE+ DGWL R ERYF +N L   + + AAV+ LEG+AL W+ +E+   P  SW EF++LLLERFR + +G+   +LL L Q TTV++Y
Subjt:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY

Query:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPV
        RR FE  +A L+D+ E VLE+ F  GL  +IQ+ELR+  PV
Subjt:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPV

A0A2I0VV18 1-phosphatidylinositol-3-phosphate 5-kinase2.6e-2848.94Show/hide
Query:  LRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRD
        +RKL++PIF   EGED  GW+++VERYF VN LT+ +K+ AA L LEG+AL+W+Q+ +   PI SW EF+  LLERFR    GD + +   L QE TV D
Subjt:  LRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRD

Query:  YRRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRP
        YR +FE  A+ L  + E  LE  F  GLK EI++ +R   P
Subjt:  YRRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRP

B9T325 Retrotrans_gag domain-containing protein3.4e-2846.43Show/hide
Query:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY
        RKL++P+F   EGE+ DGW+ R ERYF +N +   D+++AA + LEG+AL+W Q+EE   P  SW +F++ L+  FR + +G  H +LL L+Q TTV+++
Subjt:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY

Query:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRP
        RR+FE  AA LK + E VLE+ F  GL+ ++Q+ELR++ P
Subjt:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRP

W9QTX5 Mediator of RNA polymerase II transcription subunit 251.4e-3448.45Show/hide
Query:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY
        R++E+P+F   +GE+ DGW  R ERYF +N++TER+K++ AV+SLEGEAL+W Q+E+  SPI SW   + +LLERFRP  +G    + L L+QETTVRDY
Subjt:  RKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDY

Query:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPVIKSRLPSKGTMTDSFNDGQC
        RR+FE  AA L ++ E VLES F  GLK EI++E+R  +P    R+       +  N   C
Subjt:  RRRFEQYAATLKDVCEGVLESKFECGLKEEIQSELRKFRPVIKSRLPSKGTMTDSFNDGQC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67020.1 unknown protein3.2e-1039.24Show/hide
Query:  LRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRP
        +R++E+P+F   +G     W  +VER+F V R  + DK++   LSLEG AL W   E S      W  F + LL RF P
Subjt:  LRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRP

AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding7.8e-0927.27Show/hide
Query:  LHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDYRRRFEQYAATLKDVCEGVL
        L   E YF  N + E+++++    +LEG+   W ++    +  TSW EF+ ++    + + + +       +QQE +VR+YR RFE        +    L
Subjt:  LHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDYRRRFEQYAATLKDVCEGVL

Query:  ESKFECGLKEEIQSELRKFRP
        E+ F  GL+  +Q+ +R+ +P
Subjt:  ESKFECGLKEEIQSELRKFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTGAGGAAATTAGAAGTACCAATCTTCAAGGAAGAAGAAGGAGAAGACTCGGATGGATGGTTGCACCGGGTTGAACGGTATTTTGTGGTTAATCGGCTGACAGA
GAGGGATAAAGTAGAGGCGGCGGTCTTGAGTTTGGAAGGAGAGGCTTTATCGTGGCACCAATATGAAGAAAGTTGTTCACCCATAACTAGTTGGACAGAGTTTCGAAAAT
TGCTGTTAGAGAGATTTCGTCCGTCGTCCCAGGGGGATCGCCACGCTCGATTGTTGAAGCTTCAACAGGAAACCACCGTGAGAGATTACCGCCGACGGTTTGAGCAATAT
GCGGCAACCCTAAAAGACGTCTGCGAGGGAGTATTGGAAAGTAAGTTTGAATGCGGGCTTAAAGAGGAGATCCAAAGTGAATTAAGAAAGTTTCGGCCCGTCATTAAAAG
TCGTCTGCCATCAAAAGGTACAATGACAGACAGTTTTAATGACGGGCAATGCCCCTCATTAAAAGGTGTCCGTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTGAGGAAATTAGAAGTACCAATCTTCAAGGAAGAAGAAGGAGAAGACTCGGATGGATGGTTGCACCGGGTTGAACGGTATTTTGTGGTTAATCGGCTGACAGA
GAGGGATAAAGTAGAGGCGGCGGTCTTGAGTTTGGAAGGAGAGGCTTTATCGTGGCACCAATATGAAGAAAGTTGTTCACCCATAACTAGTTGGACAGAGTTTCGAAAAT
TGCTGTTAGAGAGATTTCGTCCGTCGTCCCAGGGGGATCGCCACGCTCGATTGTTGAAGCTTCAACAGGAAACCACCGTGAGAGATTACCGCCGACGGTTTGAGCAATAT
GCGGCAACCCTAAAAGACGTCTGCGAGGGAGTATTGGAAAGTAAGTTTGAATGCGGGCTTAAAGAGGAGATCCAAAGTGAATTAAGAAAGTTTCGGCCCGTCATTAAAAG
TCGTCTGCCATCAAAAGGTACAATGACAGACAGTTTTAATGACGGGCAATGCCCCTCATTAAAAGGTGTCCGTCATTAA
Protein sequenceShow/hide protein sequence
MHLRKLEVPIFKEEEGEDSDGWLHRVERYFVVNRLTERDKVEAAVLSLEGEALSWHQYEESCSPITSWTEFRKLLLERFRPSSQGDRHARLLKLQQETTVRDYRRRFEQY
AATLKDVCEGVLESKFECGLKEEIQSELRKFRPVIKSRLPSKGTMTDSFNDGQCPSLKGVRH