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Lag0008054 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008054
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:10962438..10963232
RNA-Seq ExpressionLag0008054
SyntenyLag0008054
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48912.1 hypothetical protein EZV62_024787 [Acer yangbiense]7.5e-1343.75Show/hide
Query:  WGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDF-EFGMWMR
        WG  ++++V++DISKPL+R   L+ +  +    V ++YER+ EFC+ CG IGH +K+C   E + E  KSDF ++G WMR
Subjt:  WGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDF-EFGMWMR

TXG58157.1 hypothetical protein EZV62_015986 [Acer yangbiense]4.0e-1438.6Show/hide
Query:  WGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKS-DFEFGMWMRFQGFNRQGKSIDNPKKYEEK
        WG  ++++V++DISKPL+R   L+ +  N    V+++YER+ EFC+ C IIGH +KEC  +E + E  K    +FG WMR    +RQ   ID   K + +
Subjt:  WGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKS-DFEFGMWMRFQGFNRQGKSIDNPKKYEEK

Query:  TENKDQNNEDTAEK
         E + + NE   +K
Subjt:  TENKDQNNEDTAEK

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.6e-1338.46Show/hide
Query:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDFEFGMWMRFQG
        +++N N+  WG+ +R+RV+ D+ KPL RG  L  +G    CW+ I+YER+ +F + CG + H+ K+C    V    K  + ++G W+RFQG
Subjt:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDFEFGMWMRFQG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]5.2e-1432.89Show/hide
Query:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEV-REEEKKSDFEFGMWMRFQGFN---RQG
        +D N+    WG S+RIRV +DI+KPLRRG  +  +G    CW+ I+YER+ +FC+ CG+IGH + +C  + +  +++ ++  E+G W+RF G     ++G
Subjt:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEV-REEEKKSDFEFGMWMRFQGFN---RQG

Query:  KSIDNPKKYEEKTENKDQNNEDTAEKEGKS--GEGLNVDLNQRSSMVEE
        +   +P + E+   +   N+++   +E K    E  N D  Q  +  E+
Subjt:  KSIDNPKKYEEKTENKDQNNEDTAEKEGKS--GEGLNVDLNQRSSMVEE

XP_030934705.1 uncharacterized protein LOC115960127 [Quercus lobata]1.3e-1237.59Show/hide
Query:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKEC----KGKEVREEEKKSDFEFGMWMRFQGFNRQG
        +D  K+   WG  +RIRV +DI+KPL RG M+  E + +  WV  +YER+  FC+ CGI+GH  +EC    KG    EE+   D ++G W+R      + 
Subjt:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKEC----KGKEVREEEKKSDFEFGMWMRFQGFNRQG

Query:  KSIDNPKKYEEKTENKDQNNEDTAEKEGKSGEG
        +     KK   + ++ D +NEDT   EG+ G+G
Subjt:  KSIDNPKKYEEKTENKDQNNEDTAEKEGKSGEG

TrEMBL top hitse value%identityAlignment
A0A5C7GX56 CCHC-type domain-containing protein3.6e-1343.75Show/hide
Query:  WGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDF-EFGMWMR
        WG  ++++V++DISKPL+R   L+ +  +    V ++YER+ EFC+ CG IGH +K+C   E + E  KSDF ++G WMR
Subjt:  WGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDF-EFGMWMR

A0A5C7HMB1 Uncharacterized protein1.9e-1438.6Show/hide
Query:  WGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKS-DFEFGMWMRFQGFNRQGKSIDNPKKYEEK
        WG  ++++V++DISKPL+R   L+ +  N    V+++YER+ EFC+ C IIGH +KEC  +E + E  K    +FG WMR    +RQ   ID   K + +
Subjt:  WGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKS-DFEFGMWMRFQGFNRQGKSIDNPKKYEEK

Query:  TENKDQNNEDTAEK
         E + + NE   +K
Subjt:  TENKDQNNEDTAEK

A0A6J1BSZ1 uncharacterized protein LOC1110054811.2e-1338.46Show/hide
Query:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDFEFGMWMRFQG
        +++N N+  WG+ +R+RV+ D+ KPL RG  L  +G    CW+ I+YER+ +F + CG + H+ K+C    V    K  + ++G W+RFQG
Subjt:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDFEFGMWMRFQG

A0A6J1DU55 uncharacterized protein LOC1110231352.5e-1432.89Show/hide
Query:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEV-REEEKKSDFEFGMWMRFQGFN---RQG
        +D N+    WG S+RIRV +DI+KPLRRG  +  +G    CW+ I+YER+ +FC+ CG+IGH + +C  + +  +++ ++  E+G W+RF G     ++G
Subjt:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEV-REEEKKSDFEFGMWMRFQGFN---RQG

Query:  KSIDNPKKYEEKTENKDQNNEDTAEKEGKS--GEGLNVDLNQRSSMVEE
        +   +P + E+   +   N+++   +E K    E  N D  Q  +  E+
Subjt:  KSIDNPKKYEEKTENKDQNNEDTAEKEGKS--GEGLNVDLNQRSSMVEE

A0A7N2MNG6 CCHC-type domain-containing protein2.1e-1337.3Show/hide
Query:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKEC-KGKEVREEEKKSDFEFGMWMRFQG--FNRQGK
        +D  K+   WG  +RIRV +DI+KPL RG M++ EG+ K  W   +YER+  +C++CGI+GH  +EC K K+     +  D++FG W+R  G  FNR   
Subjt:  MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKEC-KGKEVREEEKKSDFEFGMWMRFQG--FNRQGK

Query:  SIDNPKKYEEKTENKDQNNEDTAEKE
        S    K  E + +   +++E+  +K+
Subjt:  SIDNPKKYEEKTENKDQNNEDTAEKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACAAACAAGAATGATACTTACTGGGGGAATAGCATCAGAATTCGAGTGAAGCTTGATATCTCGAAACCTCTCCGTAGAGGTTTCATGCTAAGAACTGAAGGTAT
TAATAAAGCATGCTGGGTGACTATTAGATACGAGAGAATTTCGGAGTTCTGTTTTCAATGTGGCATAATTGGCCATGTCGCAAAGGAGTGCAAAGGGAAAGAAGTCAGAG
AAGAGGAAAAGAAATCAGATTTTGAATTTGGCATGTGGATGAGATTTCAAGGTTTCAACAGGCAAGGAAAAAGCATTGATAATCCAAAAAAATATGAGGAGAAAACCGAA
AACAAAGATCAGAACAATGAAGATACAGCAGAGAAGGAAGGAAAAAGTGGAGAAGGTCTGAATGTTGATCTAAACCAAAGAAGTTCTATGGTGGAGGAATTTGAAGAAAC
AAGGATATGGGAAAGAGGAAATGCAAGCGATATCAATATAGATGAGTTTATGGGCTATGAGGGTTTAGAAAGGAGATGGAAAAAGTTGCAGATGATAAGAGAAGAACCAA
GCTCTGATAACTTGGAGAGAAGCCTATCAGAAAAGGAAGAGAGCCAATCTGATTCTGTTACATCATTAAGAAAAGGGAAAACTTGGAAAACAAGGGGGAGGTCGTGTCTT
TCGGAAGGATCCCATATGGAAGTTTCAAGAACAAGGAAAAGGAAAGTTAGGCCAGATGAAGTTAGTCAGAAGAAACTAAAAGGAAAACTGGGGCAGATGAGGGATCTAGT
GGCAGTAAATAAGATTTGGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACAAACAAGAATGATACTTACTGGGGGAATAGCATCAGAATTCGAGTGAAGCTTGATATCTCGAAACCTCTCCGTAGAGGTTTCATGCTAAGAACTGAAGGTAT
TAATAAAGCATGCTGGGTGACTATTAGATACGAGAGAATTTCGGAGTTCTGTTTTCAATGTGGCATAATTGGCCATGTCGCAAAGGAGTGCAAAGGGAAAGAAGTCAGAG
AAGAGGAAAAGAAATCAGATTTTGAATTTGGCATGTGGATGAGATTTCAAGGTTTCAACAGGCAAGGAAAAAGCATTGATAATCCAAAAAAATATGAGGAGAAAACCGAA
AACAAAGATCAGAACAATGAAGATACAGCAGAGAAGGAAGGAAAAAGTGGAGAAGGTCTGAATGTTGATCTAAACCAAAGAAGTTCTATGGTGGAGGAATTTGAAGAAAC
AAGGATATGGGAAAGAGGAAATGCAAGCGATATCAATATAGATGAGTTTATGGGCTATGAGGGTTTAGAAAGGAGATGGAAAAAGTTGCAGATGATAAGAGAAGAACCAA
GCTCTGATAACTTGGAGAGAAGCCTATCAGAAAAGGAAGAGAGCCAATCTGATTCTGTTACATCATTAAGAAAAGGGAAAACTTGGAAAACAAGGGGGAGGTCGTGTCTT
TCGGAAGGATCCCATATGGAAGTTTCAAGAACAAGGAAAAGGAAAGTTAGGCCAGATGAAGTTAGTCAGAAGAAACTAAAAGGAAAACTGGGGCAGATGAGGGATCTAGT
GGCAGTAAATAAGATTTGGCAGTAG
Protein sequenceShow/hide protein sequence
MDTNKNDTYWGNSIRIRVKLDISKPLRRGFMLRTEGINKACWVTIRYERISEFCFQCGIIGHVAKECKGKEVREEEKKSDFEFGMWMRFQGFNRQGKSIDNPKKYEEKTE
NKDQNNEDTAEKEGKSGEGLNVDLNQRSSMVEEFEETRIWERGNASDINIDEFMGYEGLERRWKKLQMIREEPSSDNLERSLSEKEESQSDSVTSLRKGKTWKTRGRSCL
SEGSHMEVSRTRKRKVRPDEVSQKKLKGKLGQMRDLVAVNKIWQ