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Lag0008056 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008056
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:10976827..10977702
RNA-Seq ExpressionLag0008056
SyntenyLag0008056
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]4.7e-3240Show/hide
Query:  EVVLGSLSKFHVDVMIKSDD-GHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI
        EV + S S  H+D ++K      WRFTGFYG+PK S++I SW LL RL  L  LPW+ GGDF EI+ + EKK                       DMGF 
Subjt:  EVVLGSLSKFHVDVMIKSDD-GHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI

Query:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW
        G  FTW  +R     +QERLDR  CN  ++++FP  +V + DF  SDH P+      ++C      K  FRFE  W +  ECR +V + W
Subjt:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW

KAF4372682.1 hypothetical protein F8388_000849, partial [Cannabis sativa]3.6e-3239.47Show/hide
Query:  EVVLGSLSKFHVDVMIKSDD-GHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI
        EV + S S  H+D ++K      WRFTGFYG+PK S++I+SW LL RL  L  LPW+ GGDF E++ + EKK                       DMGF 
Subjt:  EVVLGSLSKFHVDVMIKSDD-GHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI

Query:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW
        G  FTW  +R     +QERLDR  CN  ++++FP  +V + DF  SDH P+      ++C      K  FRFE  W +  ECR +V + W
Subjt:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW

KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]4.3e-3338.95Show/hide
Query:  EVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI
        EV + S +  H+D ++K      WRFTGFYG+PK S +  SW LL RL DL  LPW+ GGDF EI+ + EKK                       D+GF 
Subjt:  EVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI

Query:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW
        G  FTW  +R     +QERLDR  CN  ++ +FP+ +V + DF  SDH P++     +  R     K CFRFE  W +  EC+ ++ R W
Subjt:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]4.3e-3338.95Show/hide
Query:  EVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI
        EV + S +  H+D ++K      WRFTGFYG+PK S +  SW LL RL DL  LPW+ GGDF EI+ + EKK                       D+GF 
Subjt:  EVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI

Query:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW
        G  FTW  +R     +QERLDR  CN  ++ +FP+ +V + DF  SDH P++     +  R     K CFRFE  W +  EC+ ++ R W
Subjt:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW

XP_023905101.1 uncharacterized protein LOC112016863 [Quercus suber]3.1e-3136.82Show/hide
Query:  VEVVLGSLSKFHVDVMI-KSDDGHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEK-----------------------KDMGF
        V + +   SK+++D  I K+ +  WRFTGFYG+P  + +  +WN LR L + S +PW+  GDF E+    EK                        DMGF
Subjt:  VEVVLGSLSKFHVDVMI-KSDDGHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEK-----------------------KDMGF

Query:  IGSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGWALAHSHPNG
        IG  FTW +       + ERLDRGL  ++F+  FP TR+ HL    SDH PLLI  + L      P K  FRFEE+W   N+C  +VE  W       +G
Subjt:  IGSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGWALAHSHPNG

Query:  DWEDKGESWRMRVKKCATEL
             G S   +V KC+ EL
Subjt:  DWEDKGESWRMRVKKCATEL

TrEMBL top hitse value%identityAlignment
A0A2N9F9I5 Uncharacterized protein4.2e-3442.29Show/hide
Query:  VEVVLGSLSKFHVDVMIKSDDGHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEK---KDMGFIGSPFTWYKRRDSRVLLQERL
        V V + S S+ H+D ++  D   WRFTGFYG P V+ K+ +W+LLR L     LPW+ GGDF E++  EEK    D+GF+G PFTW+ ++     + ERL
Subjt:  VEVVLGSLSKFHVDVMIKSDDGHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEK---KDMGFIGSPFTWYKRRDSRVLLQERL

Query:  DRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGWALAHS
        DR L  + +   FP  RV+HL    SDH PL +E + L      P K  FRFEE+WT    C   ++  W   HS
Subjt:  DRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGWALAHS

A0A2N9H6V4 RNase H domain-containing protein1.3e-3238.46Show/hide
Query:  VEVVLGSLSKFHVDVMIKSD-DGHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEK-----------------------KDMGF
        V V + S S  H+D ++  D D  WRFTGFYG P VS K+ +W+LLR L    TLPW+ GGDF E++  EEK                        D+GF
Subjt:  VEVVLGSLSKFHVDVMIKSD-DGHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEK-----------------------KDMGF

Query:  IGSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGWALAH
        +GSP+TW+ ++     + ERLDR L  + ++  FP +RV+HL    SDH P+ +E + +    S P +  FRFEE+WT    C   ++R W   H
Subjt:  IGSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGWALAH

A0A7J6GGL8 CCHC-type domain-containing protein2.1e-3338.95Show/hide
Query:  EVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI
        EV + S +  H+D ++K      WRFTGFYG+PK S +  SW LL RL DL  LPW+ GGDF EI+ + EKK                       D+GF 
Subjt:  EVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI

Query:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW
        G  FTW  +R     +QERLDR  CN  ++ +FP+ +V + DF  SDH P++     +  R     K CFRFE  W +  EC+ ++ R W
Subjt:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW

A0A7J6GL46 CCHC-type domain-containing protein2.1e-3338.95Show/hide
Query:  EVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI
        EV + S +  H+D ++K      WRFTGFYG+PK S +  SW LL RL DL  LPW+ GGDF EI+ + EKK                       D+GF 
Subjt:  EVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKK-----------------------DMGFI

Query:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW
        G  FTW  +R     +QERLDR  CN  ++ +FP+ +V + DF  SDH P++     +  R     K CFRFE  W +  EC+ ++ R W
Subjt:  GSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW

A0A803PRV5 Uncharacterized protein1.3e-3239.9Show/hide
Query:  VEVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEK-----------------------KDMGF
        +E  + S S+FH+D  I+ ++G  WRFTGFYGDP  S + HSW LL+RLN + T PWVVGGDF EI+  +EK                       +D+G+
Subjt:  VEVVLGSLSKFHVDVMIKSDDGH-WRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEK-----------------------KDMGF

Query:  IGSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETN--KLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW
         G+ +TW   R +  L+ ERLDR   NS ++ MFP  +V HLD   SDHCPLL+  +   L  + +   +  F FE  W +  EC  +V+  W
Subjt:  IGSPFTWYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETN--KLMCRPSMPCKACFRFEEVWTQFNECRVVVERGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAATATTCGGGGGTTGGGGAGCCCTCGAGCATTCAGAGATTTGCACCAGGTGGTGCGGGAGGTGGATCCCCAGAAGGGGTGGAGGTGGTTCTGGGATCACTGAG
CAAATTCCATGTCGATGTGATGATAAAGTCAGATGATGGTCACTGGAGGTTCACAGGGTTCTACGGGGATCCGAAGGTGTCGAATAAAATCCACTCATGGAACTTGTTAA
GGAGGCTGAATGACTTGAGTACACTGCCATGGGTGGTGGGGGGAGATTTTAAAGAGATTGTGTGCATGGAAGAAAAGAAAGATATGGGCTTCATTGGCTCACCTTTCACG
TGGTACAAGAGAAGGGATAGTAGGGTGCTCTTGCAGGAGAGATTGGATAGGGGCCTATGCAATTCAGCCTTCTACTCCATGTTCCCGTATACTCGTGTAAGTCACCTTGA
CTTTCGGTTGTCTGATCACTGTCCTTTGCTAATTGAGACTAATAAGCTTATGTGTAGGCCCAGTATGCCGTGTAAAGCATGTTTTCGCTTTGAGGAGGTGTGGACTCAGT
TCAACGAGTGCAGGGTAGTAGTGGAGAGGGGGTGGGCTTTGGCGCATTCTCATCCAAATGGCGATTGGGAGGATAAAGGGGAGAGTTGGAGGATGAGGGTGAAGAAGTGT
GCAACAGAGTTATCCATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAATATTCGGGGGTTGGGGAGCCCTCGAGCATTCAGAGATTTGCACCAGGTGGTGCGGGAGGTGGATCCCCAGAAGGGGTGGAGGTGGTTCTGGGATCACTGAG
CAAATTCCATGTCGATGTGATGATAAAGTCAGATGATGGTCACTGGAGGTTCACAGGGTTCTACGGGGATCCGAAGGTGTCGAATAAAATCCACTCATGGAACTTGTTAA
GGAGGCTGAATGACTTGAGTACACTGCCATGGGTGGTGGGGGGAGATTTTAAAGAGATTGTGTGCATGGAAGAAAAGAAAGATATGGGCTTCATTGGCTCACCTTTCACG
TGGTACAAGAGAAGGGATAGTAGGGTGCTCTTGCAGGAGAGATTGGATAGGGGCCTATGCAATTCAGCCTTCTACTCCATGTTCCCGTATACTCGTGTAAGTCACCTTGA
CTTTCGGTTGTCTGATCACTGTCCTTTGCTAATTGAGACTAATAAGCTTATGTGTAGGCCCAGTATGCCGTGTAAAGCATGTTTTCGCTTTGAGGAGGTGTGGACTCAGT
TCAACGAGTGCAGGGTAGTAGTGGAGAGGGGGTGGGCTTTGGCGCATTCTCATCCAAATGGCGATTGGGAGGATAAAGGGGAGAGTTGGAGGATGAGGGTGAAGAAGTGT
GCAACAGAGTTATCCATCTAG
Protein sequenceShow/hide protein sequence
MFEYSGVGEPSSIQRFAPGGAGGGSPEGVEVVLGSLSKFHVDVMIKSDDGHWRFTGFYGDPKVSNKIHSWNLLRRLNDLSTLPWVVGGDFKEIVCMEEKKDMGFIGSPFT
WYKRRDSRVLLQERLDRGLCNSAFYSMFPYTRVSHLDFRLSDHCPLLIETNKLMCRPSMPCKACFRFEEVWTQFNECRVVVERGWALAHSHPNGDWEDKGESWRMRVKKC
ATELSI