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Lag0008058 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008058
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:10978739..10979080
RNA-Seq ExpressionLag0008058
SyntenyLag0008058
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]7.9e-2050.46Show/hide
Query:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD
        MD++ + W  +  T  E   V     K +  A+++ LCVVAKL +SK  +  A RSVM+SVWRVH  TR E  G NI+ I FKS  EK+RVL S PWTF+
Subjt:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD

Query:  KSLLVMVSP
        KSLLV+ SP
Subjt:  KSLLVMVSP

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]3.7e-1743.36Show/hide
Query:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD
        MD++ E W  + LT+++   +     K L   E++    V KL +SK  +  A+RSVM+S+W+VH+ T IE+AG N++ I FKS  EK RVL S PW+F+
Subjt:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD

Query:  KSLLVMVSPKEND
         SLLV+ SP   D
Subjt:  KSLLVMVSPKEND

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.8e-1643.93Show/hide
Query:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD
        MDD+ + W  + L ++E   +   + K +   ++I LC V KL  SK     A+ SVM+ VW++H  TRIE+AG NI+ I FK+  EK RV    PWTFD
Subjt:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD

Query:  KSLLVMV
        KSLL++V
Subjt:  KSLLVMV

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]2.1e-2048.67Show/hide
Query:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD
        MD++ E W  +NLT +E       + + +  AE+I LC V KL +SK  +  A  SVM+ VW++H+ TRIE+AG NI+ I FK+ +EK RVL S PWTFD
Subjt:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD

Query:  KSLLVMVSPKEND
        KSL V+VSP   D
Subjt:  KSLLVMVSPKEND

XP_042962438.1 uncharacterized protein LOC122296703 [Carya illinoinensis]1.3e-1137.86Show/hide
Query:  DDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFDK
        +DL + W    LTE E   V+  D  L+ AA+    C++AK+I+ ++ N  A+RS M  VW++         GE+ F + F  K++K ++LR RPWTFD+
Subjt:  DDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFDK

Query:  SLL
        SL+
Subjt:  SLL

TrEMBL top hitse value%identityAlignment
A0A5C7IW83 CCHC-type domain-containing protein2.5e-1131.48Show/hide
Query:  DLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFDKS
        ++ + +   ++ E++G V+E  + ++   A+D+D C+V K+++ K  N  A+RS++  +W    Q  +E   +NIF  YF  + ++ RV +  PW F KS
Subjt:  DLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFDKS

Query:  LLVMVSPK
        L+V+  PK
Subjt:  LLVMVSPK

A0A6J1D765 uncharacterized protein LOC1110179023.8e-2050.46Show/hide
Query:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD
        MD++ + W  +  T  E   V     K +  A+++ LCVVAKL +SK  +  A RSVM+SVWRVH  TR E  G NI+ I FKS  EK+RVL S PWTF+
Subjt:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD

Query:  KSLLVMVSP
        KSLLV+ SP
Subjt:  KSLLVMVSP

A0A6J1DP89 uncharacterized protein LOC1110229321.8e-1743.36Show/hide
Query:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD
        MD++ E W  + LT+++   +     K L   E++    V KL +SK  +  A+RSVM+S+W+VH+ T IE+AG N++ I FKS  EK RVL S PW+F+
Subjt:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD

Query:  KSLLVMVSPKEND
         SLLV+ SP   D
Subjt:  KSLLVMVSPKEND

A0A6J1DVS4 uncharacterized protein LOC1110235558.8e-1743.93Show/hide
Query:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD
        MDD+ + W  + L ++E   +   + K +   ++I LC V KL  SK     A+ SVM+ VW++H  TRIE+AG NI+ I FK+  EK RV    PWTFD
Subjt:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD

Query:  KSLLVMV
        KSLL++V
Subjt:  KSLLVMV

A0A6J1DYG3 uncharacterized protein LOC1110246761.0e-2048.67Show/hide
Query:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD
        MD++ E W  +NLT +E       + + +  AE+I LC V KL +SK  +  A  SVM+ VW++H+ TRIE+AG NI+ I FK+ +EK RVL S PWTFD
Subjt:  MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFD

Query:  KSLLVMVSPKEND
        KSL V+VSP   D
Subjt:  KSLLVMVSPKEND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCTCGTTGAGCGATGGAGGAGATGGAACCTAACGGAAAAGGAAGGAAGAGTGGTAGAAGCAGTGGATTGCAAGTTGTTGTTTGCGGCTGAGGACATTGATTT
GTGTGTGGTTGCAAAACTGATTTCTAGTAAGGTGGCCAATTGTGCTGCTTACAGATCGGTCATGAGATCCGTTTGGAGGGTTCACCAACAGACAAGAATTGAGTCGGCAG
GGGAGAATATTTTTTTCATCTATTTCAAGTCTAAGATGGAAAAGGCGAGAGTGTTGAGGTCTAGGCCATGGACGTTTGACAAGTCCCTCCTAGTGATGGTTTCGCCGAAG
GAGAATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCTCGTTGAGCGATGGAGGAGATGGAACCTAACGGAAAAGGAAGGAAGAGTGGTAGAAGCAGTGGATTGCAAGTTGTTGTTTGCGGCTGAGGACATTGATTT
GTGTGTGGTTGCAAAACTGATTTCTAGTAAGGTGGCCAATTGTGCTGCTTACAGATCGGTCATGAGATCCGTTTGGAGGGTTCACCAACAGACAAGAATTGAGTCGGCAG
GGGAGAATATTTTTTTCATCTATTTCAAGTCTAAGATGGAAAAGGCGAGAGTGTTGAGGTCTAGGCCATGGACGTTTGACAAGTCCCTCCTAGTGATGGTTTCGCCGAAG
GAGAATGATTAG
Protein sequenceShow/hide protein sequence
MDDLVERWRRWNLTEKEGRVVEAVDCKLLFAAEDIDLCVVAKLISSKVANCAAYRSVMRSVWRVHQQTRIESAGENIFFIYFKSKMEKARVLRSRPWTFDKSLLVMVSPK
END