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Lag0008062 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008062
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:11146242..11146934
RNA-Seq ExpressionLag0008062
SyntenyLag0008062
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021738182.1 uncharacterized protein LOC110704671 [Chenopodium quinoa]7.0e-0748.53Show/hide
Query:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWM
        +DITKPLRRGIKV    P  S W   KYE+L + C +CGR+RH++KDC      +   S   QYG +M
Subjt:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWM

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]6.8e-1046.15Show/hide
Query:  DITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTG--RSSNL
        D+ KPL RGIK+ +D P G  W  I+YE+LP+   +CGR+ HI KDC    +   S S+  QYG W++F G   SSN+
Subjt:  DITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTG--RSSNL

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.2e-1236.3Show/hide
Query:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQ-QHQYGMWMQFTGRSSNLFRS-PSTSPMGKNSIMADVLNS
        +DITKPLRRGIK+ ID P G  W  I+YE+LP+ C +CG I H S DC + YL     S+   +YG W++F G  +   +     SP  ++S  +  +NS
Subjt:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQ-QHQYGMWMQFTGRSSNLFRS-PSTSPMGKNSIMADVLNS

Query:  NQ---STPRAMNMEQSGNSGNTGVVGAETQGNESG
         +      +    EQ+   G      AE  G+  G
Subjt:  NQ---STPRAMNMEQSGNSGNTGVVGAETQGNESG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.3e-0833.86Show/hide
Query:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTG------------------RSSNLFRSPS
        +DI+KPLRRGIK+ +D P G  W  I+YE+LP+ C +CG                 S+ ++HQYG W+++ G                  +S N   S S
Subjt:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTG------------------RSSNLFRSPS

Query:  TSPMGKNSIMADVLNSNQSTPRAMNME
        TSP+G  S    V ++  + P A+ ME
Subjt:  TSPMGKNSIMADVLNSNQSTPRAMNME

XP_035551689.1 uncharacterized protein LOC118349870 [Juglans regia]3.1e-0739.22Show/hide
Query:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQ-QHQYGMWMQFTGRS--SNLFRSPSTSPMGKNSIMADVLN
        +DI+KPL RGI+V + E    VW   KYEKLP+ C YCG + H  +DC  +    G   +    YG WM+    S  +  +  PST+    NSI  D   
Subjt:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQ-QHQYGMWMQFTGRS--SNLFRSPSTSPMGKNSIMADVLN

Query:  SN
        SN
Subjt:  SN

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054813.3e-1046.15Show/hide
Query:  DITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTG--RSSNL
        D+ KPL RGIK+ +D P G  W  I+YE+LP+   +CGR+ HI KDC    +   S S+  QYG W++F G   SSN+
Subjt:  DITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTG--RSSNL

A0A6J1DU55 uncharacterized protein LOC1110231352.1e-1236.3Show/hide
Query:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQ-QHQYGMWMQFTGRSSNLFRS-PSTSPMGKNSIMADVLNS
        +DITKPLRRGIK+ ID P G  W  I+YE+LP+ C +CG I H S DC + YL     S+   +YG W++F G  +   +     SP  ++S  +  +NS
Subjt:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQ-QHQYGMWMQFTGRSSNLFRS-PSTSPMGKNSIMADVLNS

Query:  NQ---STPRAMNMEQSGNSGNTGVVGAETQGNESG
         +      +    EQ+   G      AE  G+  G
Subjt:  NQ---STPRAMNMEQSGNSGNTGVVGAETQGNESG

A0A6J1DX30 uncharacterized protein LOC1110248743.1e-0833.86Show/hide
Query:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTG------------------RSSNLFRSPS
        +DI+KPLRRGIK+ +D P G  W  I+YE+LP+ C +CG                 S+ ++HQYG W+++ G                  +S N   S S
Subjt:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTG------------------RSSNLFRSPS

Query:  TSPMGKNSIMADVLNSNQSTPRAMNME
        TSP+G  S    V ++  + P A+ ME
Subjt:  TSPMGKNSIMADVLNSNQSTPRAMNME

A0A6P9EVN9 uncharacterized protein LOC1183498701.5e-0739.22Show/hide
Query:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQ-QHQYGMWMQFTGRS--SNLFRSPSTSPMGKNSIMADVLN
        +DI+KPL RGI+V + E    VW   KYEKLP+ C YCG + H  +DC  +    G   +    YG WM+    S  +  +  PST+    NSI  D   
Subjt:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQ-QHQYGMWMQFTGRS--SNLFRSPSTSPMGKNSIMADVLN

Query:  SN
        SN
Subjt:  SN

A0A803MN93 Uncharacterized protein3.4e-0748.53Show/hide
Query:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWM
        +DITKPLRRGIKV    P  S W   KYE+L + C +CGR+RH++KDC      +   S   QYG +M
Subjt:  MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATAACCAAGCCGCTCCGTCGTGGGATCAAAGTGAAGATTGATGAACCGTTTGGGAGTGTGTGGTCTCTGATTAAGTATGAGAAGCTGCCAGAAATCTGTTCTTA
TTGTGGGCGAATCAGGCATATATCGAAAGATTGCGGCTCCTTCTATTTGACCGATGGCTCTACATCCCAACAACATCAATATGGGATGTGGATGCAGTTCACCGGTCGAA
GCTCCAATTTATTCAGATCGCCAAGCACCAGTCCGATGGGGAAGAATTCAATCATGGCTGATGTTTTGAATTCTAATCAGTCGACTCCGAGAGCTATGAACATGGAGCAA
TCTGGAAATTCTGGAAATACTGGAGTTGTCGGTGCTGAAACTCAGGGGAACGAGTCAGGCAGTCGGGCGATGGAAATCTCGCCGGGGGTGATGGATGAGGTGGCAACAGC
GTTAATGGGCAATAACTCTGGTTTTAATGAGATCCAAGCCGACATTTATGGTGCTGAAACGTCCAAAGCAAAAAAGAAACTGGTCTACGGCGAGGTAACTATGGGGGGTT
TTTGTGAAAGCGTTAATGAGCAGGTCAATGGCGGAAATCACGGCACCAATATTGGTAACGCTAGGCCCGATGGACAGACTGAAGGTGTGGCGGATGCGGGAGTGGATCGA
AACGAGACTTTGGATTTCAATGGCCCCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATAACCAAGCCGCTCCGTCGTGGGATCAAAGTGAAGATTGATGAACCGTTTGGGAGTGTGTGGTCTCTGATTAAGTATGAGAAGCTGCCAGAAATCTGTTCTTA
TTGTGGGCGAATCAGGCATATATCGAAAGATTGCGGCTCCTTCTATTTGACCGATGGCTCTACATCCCAACAACATCAATATGGGATGTGGATGCAGTTCACCGGTCGAA
GCTCCAATTTATTCAGATCGCCAAGCACCAGTCCGATGGGGAAGAATTCAATCATGGCTGATGTTTTGAATTCTAATCAGTCGACTCCGAGAGCTATGAACATGGAGCAA
TCTGGAAATTCTGGAAATACTGGAGTTGTCGGTGCTGAAACTCAGGGGAACGAGTCAGGCAGTCGGGCGATGGAAATCTCGCCGGGGGTGATGGATGAGGTGGCAACAGC
GTTAATGGGCAATAACTCTGGTTTTAATGAGATCCAAGCCGACATTTATGGTGCTGAAACGTCCAAAGCAAAAAAGAAACTGGTCTACGGCGAGGTAACTATGGGGGGTT
TTTGTGAAAGCGTTAATGAGCAGGTCAATGGCGGAAATCACGGCACCAATATTGGTAACGCTAGGCCCGATGGACAGACTGAAGGTGTGGCGGATGCGGGAGTGGATCGA
AACGAGACTTTGGATTTCAATGGCCCCGTTTGA
Protein sequenceShow/hide protein sequence
MDITKPLRRGIKVKIDEPFGSVWSLIKYEKLPEICSYCGRIRHISKDCGSFYLTDGSTSQQHQYGMWMQFTGRSSNLFRSPSTSPMGKNSIMADVLNSNQSTPRAMNMEQ
SGNSGNTGVVGAETQGNESGSRAMEISPGVMDEVATALMGNNSGFNEIQADIYGAETSKAKKKLVYGEVTMGGFCESVNEQVNGGNHGTNIGNARPDGQTEGVADAGVDR
NETLDFNGPV