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Lag0008077 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008077
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:11473288..11473743
RNA-Seq ExpressionLag0008077
SyntenyLag0008077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]1.2e-2866.67Show/hide
Query:  QAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRD
        Q  NPI++A+DRARAIR Y  PMF+ELNPGIVR +I+A  FE+  VMFQMLQTVGQF G+  EDPHLHL+SFL VSDSF IQ V  + +RL LF +SLRD
Subjt:  QAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRD

Query:  GA
         A
Subjt:  GA

XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]5.0e-3054.35Show/hide
Query:  QQNRVLQQN-PPIEKNGQQNNQAENPILVAN-------------DRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPH
        ++ ++ +QN   IE   Q N + ENP ++AN             DR RAIRAY  P  +ELNP I+R +++A  FE+  VMFQMLQT+GQFHGL  EDPH
Subjt:  QQNRVLQQN-PPIEKNGQQNNQAENPILVAN-------------DRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPH

Query:  LHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRDGAST
        LHLKSFLGVSDSF  QRV +D +RL+LF YSLRDGA +
Subjt:  LHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRDGAST

XP_022947838.1 uncharacterized protein LOC111451598 [Cucurbita moschata]2.1e-2862.62Show/hide
Query:  QNNQAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYS
        Q     N I VA+DR RAIRAY  P  +ELNP I+R +++A  FE+  VMFQMLQT+GQFHGL  +DPHLHLKSFLGVSDSF  Q V +D +RL+ FSYS
Subjt:  QNNQAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYS

Query:  LRDGAST
        LRDGA +
Subjt:  LRDGAST

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]6.6e-3057.14Show/hide
Query:  IEKNGQQNNQAENPILVAN-------------DRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDS
        I++  Q N + ENP+++AN             DR RAIRAY  P  DELNP I+R +++A  FE+  VMFQMLQT+GQFHGL  EDPHLHLKSFLGVSDS
Subjt:  IEKNGQQNNQAENPILVAN-------------DRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDS

Query:  FVIQRVLRDAVRLTLFSYSLRDGAST
        F  Q V +D +RL+LF YSLRDGA +
Subjt:  FVIQRVLRDAVRLTLFSYSLRDGAST

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]2.8e-2853.96Show/hide
Query:  LAITDPQQNRVLQQNPPIEKNGQQNNQAE-----------NPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCE
        LA  DP+  R  +Q    +K  ++ N A+           NPI +A+DRARAIR Y  PMF+ELNPGIVR +I+A +FE+  VMFQMLQTVGQF G   E
Subjt:  LAITDPQQNRVLQQNPPIEKNGQQNNQAE-----------NPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCE

Query:  DPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRDGA
        DPHLH++SFL VSDSF +Q V  +A+RL LF +SLRD A
Subjt:  DPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRDGA

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333942.4e-3054.35Show/hide
Query:  QQNRVLQQN-PPIEKNGQQNNQAENPILVAN-------------DRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPH
        ++ ++ +QN   IE   Q N + ENP ++AN             DR RAIRAY  P  +ELNP I+R +++A  FE+  VMFQMLQT+GQFHGL  EDPH
Subjt:  QQNRVLQQN-PPIEKNGQQNNQAENPILVAN-------------DRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPH

Query:  LHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRDGAST
        LHLKSFLGVSDSF  QRV +D +RL+LF YSLRDGA +
Subjt:  LHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRDGAST

A0A6J1G7Q6 uncharacterized protein LOC1114515981.0e-2862.62Show/hide
Query:  QNNQAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYS
        Q     N I VA+DR RAIRAY  P  +ELNP I+R +++A  FE+  VMFQMLQT+GQFHGL  +DPHLHLKSFLGVSDSF  Q V +D +RL+ FSYS
Subjt:  QNNQAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYS

Query:  LRDGAST
        LRDGA +
Subjt:  LRDGAST

A0A6J1H7E4 uncharacterized protein LOC1114611683.2e-3057.14Show/hide
Query:  IEKNGQQNNQAENPILVAN-------------DRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDS
        I++  Q N + ENP+++AN             DR RAIRAY  P  DELNP I+R +++A  FE+  VMFQMLQT+GQFHGL  EDPHLHLKSFLGVSDS
Subjt:  IEKNGQQNNQAENPILVAN-------------DRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDS

Query:  FVIQRVLRDAVRLTLFSYSLRDGAST
        F  Q V +D +RL+LF YSLRDGA +
Subjt:  FVIQRVLRDAVRLTLFSYSLRDGAST

U5CUI2 Retrotrans_gag domain-containing protein6.0e-2966.67Show/hide
Query:  QAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRD
        Q  NPI++A+DRARAIR Y  PMF+ELNPGIVR +I+A  FE+  VMFQMLQTVGQF G+  EDPHLHL+SFL VSDSF IQ V  + +RL LF +SLRD
Subjt:  QAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRD

Query:  GA
         A
Subjt:  GA

U5CUK7 Uncharacterized protein3.3e-2763.3Show/hide
Query:  KNGQQNNQAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTL
        K G  +N+A NPI +A+DRARAIR Y  PMF+ELN GIVR +I+A +FE+  VMFQMLQTVGQF G   EDPHLH++SFL VSDSF +Q V  +A+RL L
Subjt:  KNGQQNNQAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCEDPHLHLKSFLGVSDSFVIQRVLRDAVRLTL

Query:  FSYSLRDGA
        F +SLRD A
Subjt:  FSYSLRDGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAAATCTGGCAAATATCAAAGACTAACTAAATTAATTAGGAACAAATTGCTTGCTCCGCTCGCTATCACTGATCCCCAACAGAACCGCGTGCTGCAACAAAATCC
ACCAATAGAGAAAAATGGACAGCAAAATAACCAGGCTGAGAACCCTATTCTGGTAGCGAATGATAGGGCCAGAGCCATTCGAGCGTATGGTTTCCCGATGTTTGACGAGT
TGAATCCAGGAATTGTGCGTTCTCAAATTGAGGCAGCAAATTTTGAAATGATACTGGTTATGTTCCAGATGTTGCAGACCGTGGGTCAATTCCATGGTTTACAATGTGAG
GATCCCCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCGTTTGTTATTCAGAGAGTGTTGAGAGATGCCGTTAGATTGACTTTATTCTCGTACTCTCTTAGAGA
TGGAGCGTCGACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATAAATCTGGCAAATATCAAAGACTAACTAAATTAATTAGGAACAAATTGCTTGCTCCGCTCGCTATCACTGATCCCCAACAGAACCGCGTGCTGCAACAAAATCC
ACCAATAGAGAAAAATGGACAGCAAAATAACCAGGCTGAGAACCCTATTCTGGTAGCGAATGATAGGGCCAGAGCCATTCGAGCGTATGGTTTCCCGATGTTTGACGAGT
TGAATCCAGGAATTGTGCGTTCTCAAATTGAGGCAGCAAATTTTGAAATGATACTGGTTATGTTCCAGATGTTGCAGACCGTGGGTCAATTCCATGGTTTACAATGTGAG
GATCCCCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCGTTTGTTATTCAGAGAGTGTTGAGAGATGCCGTTAGATTGACTTTATTCTCGTACTCTCTTAGAGA
TGGAGCGTCGACGTAG
Protein sequenceShow/hide protein sequence
MHKSGKYQRLTKLIRNKLLAPLAITDPQQNRVLQQNPPIEKNGQQNNQAENPILVANDRARAIRAYGFPMFDELNPGIVRSQIEAANFEMILVMFQMLQTVGQFHGLQCE
DPHLHLKSFLGVSDSFVIQRVLRDAVRLTLFSYSLRDGAST