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Lag0008084 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008084
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE2
Genome locationchr9:11633924..11637335
RNA-Seq ExpressionLag0008084
SyntenyLag0008084
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048296.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-1259.21Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWG
        A+HLS NPILH+K K VEL IYFVR+L+   K+ ++HLP  EQ  DI+TK LS  SF+ LK KL V D+T IGL G
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWG
KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-1356.96Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLR
        A+H S NPILH+K K VEL IYFVR+L+  +K+ ++HLP  EQ  DI+TK LS  SF+KLK  + V D+  IGL GVLR
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLR
KAA0063213.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.1e-1156.96Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLR
        A+HLS N ILH+  K VEL IYFVR+L+   K+ I+HL   EQ  DI+TK LS  S +KLK KL V D+ +IGL GVLR
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLR
XP_016902754.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.3e-1259.21Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWG
        A+HLS NPILH+K K VEL IYFVR+L+   K+ ++HLP  EQ  DI+TK LS  SF+ LK KL V D+T IGL G
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWG
XP_022135935.1 uncharacterized protein LOC111007767 [Momordica charantia]1.1e-1158.11Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGL
        A+HLS N ILH K K VE  IYFVR+LV NKK L+ HLPT  Q  D++TK L  ++F +LK KLNVRD  +I L
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGL
TrEMBL top hitse value%identityAlignment
A0A1S4E3F1 uncharacterized mitochondrial protein AtMg00810-like6.1e-1359.21Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWG
        A+HLS NPILH+K K VEL IYFVR+L+   K+ ++HLP  EQ  DI+TK LS  SF+ LK KL V D+T IGL G
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWG
A0A5A7UFS3 Putative mitochondrial protein9.4e-1456.96Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLR
        A+H S NPILH+K K VEL IYFVR+L+  +K+ ++HLP  EQ  DI+TK LS  SF+KLK  + V D+  IGL GVLR
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLR
A0A5A7V553 Putative mitochondrial protein2.0e-1156.96Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLR
        A+HLS N ILH+  K VEL IYFVR+L+   K+ I+HL   EQ  DI+TK LS  S +KLK KL V D+ +IGL GVLR
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLR
A0A5D3CFS1 Putative mitochondrial protein6.1e-1359.21Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWG
        A+HLS NPILH+K K VEL IYFVR+L+   K+ ++HLP  EQ  DI+TK LS  SF+ LK KL V D+T IGL G
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWG
A0A6J1C2F7 uncharacterized protein LOC1110077675.2e-1258.11Show/hide
Query:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGL
        A+HLS N ILH K K VE  IYFVR+LV NKK L+ HLPT  Q  D++TK L  ++F +LK KLNVRD  +I L
Subjt:  AMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGL
SwissProt top hitse value%identityAlignment
Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-0535.82Show/hide
Query:  GAMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNV
        GA +L  NP+ H++MK + L  +F+R  V +  + + H+ TH+Q  D +TK LS ++F     K+ V
Subjt:  GAMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNV
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACTGTCTTCATGGCAACGTTGAGATGCCCTAAAGGCAGTGTCTCAACGCTCCTCTCGGGTGCTATGCATTTGAGTGTCAATCCTATCTTACATGCTAAAATGAA
GCTTGTTGAACTTTACATTTACTTTGTTCGTGAGCTTGTGTTCAACAAAAAGATCCTCATTCAACATCTCCCTACACATGAACAGAGAGTTGATATTATCACCAAGTCGT
TATCGACCCTATCCTTCAACAAACTAAAGTACAAGCTCAATGTTCGTGATGCCACTACCATTGGCTTGTGGGGGGTGTTAAGGACTTGTTTGATAACGTTCCTGTTTCCT
GATTCCTGTTCCCGATTCTTCTTTTTCAAGAAACAAACTTTCGCTGCTGACCTCCATCGACCGACCGTCATTGTTGACCTCCGACTATCAGTCATCGTCGACCTCCGCCG
ACCAGCCGTTACCATCAACCTCCATTATCGGTCGTCGGGGATCGATCGCCTCCGACGATCGACCACCGTTGACCTCTACCGACTGACCGCCACAATCCACCTCCGACTAC
CAGTCGTCGTTGGCCAGCATCATCGACCTCCGACTACCGGTCGCGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTACTGTCTTCATGGCAACGTTGAGATGCCCTAAAGGCAGTGTCTCAACGCTCCTCTCGGGTGCTATGCATTTGAGTGTCAATCCTATCTTACATGCTAAAATGAA
GCTTGTTGAACTTTACATTTACTTTGTTCGTGAGCTTGTGTTCAACAAAAAGATCCTCATTCAACATCTCCCTACACATGAACAGAGAGTTGATATTATCACCAAGTCGT
TATCGACCCTATCCTTCAACAAACTAAAGTACAAGCTCAATGTTCGTGATGCCACTACCATTGGCTTGTGGGGGGTGTTAAGGACTTGTTTGATAACGTTCCTGTTTCCT
GATTCCTGTTCCCGATTCTTCTTTTTCAAGAAACAAACTTTCGCTGCTGACCTCCATCGACCGACCGTCATTGTTGACCTCCGACTATCAGTCATCGTCGACCTCCGCCG
ACCAGCCGTTACCATCAACCTCCATTATCGGTCGTCGGGGATCGATCGCCTCCGACGATCGACCACCGTTGACCTCTACCGACTGACCGCCACAATCCACCTCCGACTAC
CAGTCGTCGTTGGCCAGCATCATCGACCTCCGACTACCGGTCGCGACTGA
Protein sequenceShow/hide protein sequence
MPTVFMATLRCPKGSVSTLLSGAMHLSVNPILHAKMKLVELYIYFVRELVFNKKILIQHLPTHEQRVDIITKSLSTLSFNKLKYKLNVRDATTIGLWGVLRTCLITFLFP
DSCSRFFFFKKQTFAADLHRPTVIVDLRLSVIVDLRRPAVTINLHYRSSGIDRLRRSTTVDLYRLTATIHLRLPVVVGQHHRPPTTGRD